RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 KAT14Q9H8E8 782 aa18.11■□□□□ 0.49
SNRNP48-203ENST00000634363 VAT1LQ9HCJ6 419 aa18.11■□□□□ 0.49
SNRNP48-203ENST00000634363 MYH6P13533 1939 aa18.11■□□□□ 0.49
SNRNP48-203ENST00000634363 B4E1Z4 1266 aa18.1■□□□□ 0.49
SNRNP48-203ENST00000634363 KDM4AO75164 1064 aa18.1■□□□□ 0.49
SNRNP48-203ENST00000634363 CYP21A2P08686 494 aa18.1■□□□□ 0.49
SNRNP48-203ENST00000634363 CDC37Q16543 378 aaPredicted RBP18.1■□□□□ 0.49
SNRNP48-203ENST00000634363 KRT40Q6A162 431 aa18.1■□□□□ 0.49
SNRNP48-203ENST00000634363 IQCA1Q86XH1 822 aa18.1■□□□□ 0.49
SNRNP48-203ENST00000634363 DGKHQ86XP1 1220 aa18.1■□□□□ 0.49
SNRNP48-203ENST00000634363 ADGRF4Q8IZF3 695 aa18.1■□□□□ 0.49
SNRNP48-203ENST00000634363 PNMA1Q8ND90 353 aa18.1■□□□□ 0.49
SNRNP48-203ENST00000634363 RGS22Q8NE09 1264 aa18.1■□□□□ 0.49
SNRNP48-203ENST00000634363 PHOSPHO2Q8TCD6 241 aa18.1■□□□□ 0.49
SNRNP48-203ENST00000634363 TET1Q8NFU7 2136 aa18.1■□□□□ 0.49
SNRNP48-203ENST00000634363 TTC28Q96AY4 2481 aa18.09■□□□□ 0.49
SNRNP48-203ENST00000634363 GH1P01241 217 aa18.09■□□□□ 0.49
SNRNP48-203ENST00000634363 KCNJ6P48051 423 aa18.09■□□□□ 0.49
SNRNP48-203ENST00000634363 STXBP2Q15833 593 aa18.09■□□□□ 0.49
SNRNP48-203ENST00000634363 CCDC62Q6P9F0 684 aa18.09■□□□□ 0.49
SNRNP48-203ENST00000634363 RALYLQ86SE5 291 aaKnown RBP18.09■□□□□ 0.49
SNRNP48-203ENST00000634363 HERC6Q8IVU3 1022 aa18.09■□□□□ 0.49
SNRNP48-203ENST00000634363 NSUN6Q8TEA1 469 aaKnown RBP18.09■□□□□ 0.49
SNRNP48-203ENST00000634363 RMDN3Q96TC7 470 aa18.09■□□□□ 0.49
SNRNP48-203ENST00000634363 RAPGEFL1Q9UHV5 662 aa18.09■□□□□ 0.49
SNRNP48-203ENST00000634363 MTCH2Q9Y6C9 303 aa18.09■□□□□ 0.49
SNRNP48-203ENST00000634363 MYH7BA7E2Y1 1941 aa18.09■□□□□ 0.49
SNRNP48-203ENST00000634363 KIAA1217Q5T5P2 1943 aa18.08■□□□□ 0.49
SNRNP48-203ENST00000634363 ABCB11O95342 1321 aa18.08■□□□□ 0.49
SNRNP48-203ENST00000634363 EPOPA6NHQ4 379 aa18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 TLL1O43897 1013 aa18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 MMP3P08254 477 aa18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 BMP1P13497 986 aa18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 CASTP20810 708 aaKnown RBP18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 KCNQ1P51787 676 aa18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 TAP1Q03518 808 aa18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 AAK1Q2M2I8 961 aa18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 CCDC178Q5BJE1 867 aa18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 ARHGEF16Q5VV41 709 aa18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 GDF6Q6KF10 455 aaPredicted RBP18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 CCDC155Q8N6L0 562 aa18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 SYTL5Q8TDW5 730 aaPredicted RBP18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 ZBED2Q9BTP6 218 aa18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 COL20A1Q9P218 1284 aa18.08■□□□□ 0.48
SNRNP48-203ENST00000634363 TANC1Q9C0D5 1861 aa18.07■□□□□ 0.48
SNRNP48-203ENST00000634363 PRRC2BQ5JSZ5 2229 aaKnown RBP18.07■□□□□ 0.48
SNRNP48-203ENST00000634363 ARHGEF15O94989 841 aa18.07■□□□□ 0.48
SNRNP48-203ENST00000634363 EIF2AK2P19525 551 aaKnown RBP18.07■□□□□ 0.48
SNRNP48-203ENST00000634363 ARHGAP1Q07960 439 aa18.07■□□□□ 0.48
SNRNP48-203ENST00000634363 RNF20Q5VTR2 975 aa18.07■□□□□ 0.48
SNRNP48-203ENST00000634363 TMCO2Q7Z6W1 182 aaPredicted RBP18.07■□□□□ 0.48
SNRNP48-203ENST00000634363 FBXO11Q86XK2 927 aa18.07■□□□□ 0.48
SNRNP48-203ENST00000634363 MCF2L2Q86YR7 1114 aa18.07■□□□□ 0.48
SNRNP48-203ENST00000634363 UBAC1Q9BSL1 405 aa18.07■□□□□ 0.48
SNRNP48-203ENST00000634363 ALG1Q9BT22 464 aa18.07■□□□□ 0.48
SNRNP48-203ENST00000634363 MRPL11Q9Y3B7 192 aaKnown RBP18.07■□□□□ 0.48
SNRNP48-203ENST00000634363 CHD9Q3L8U1 2897 aa18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 E7EWF7 191 aa18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 REC8O95072 547 aa18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 CFBP00751 764 aa18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 DGKDQ16760 1214 aa18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 QRICH1Q2TAL8 776 aa18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 C7orf31Q8N865 590 aa18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 NCOA7Q8NI08 942 aa18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 CAGE1Q8TC20 777 aa18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 AFAP1L1Q8TED9 768 aa18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 IWS1Q96ST2 819 aa18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 ZSCAN10Q96SZ4 725 aaPredicted RBP18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 ZSWIM5Q9P217 1185 aa18.06■□□□□ 0.48
SNRNP48-203ENST00000634363 SLC27A2O14975 620 aa18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 BAIAP3O94812 1187 aa18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 PARP1P09874 1014 aaKnown RBP18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 SELPP16109 830 aa18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 POU3F3P20264 500 aaPredicted RBP18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 ASPRV1Q53RT3 343 aa18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 CREB3L3Q68CJ9 461 aa18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 SPRED2Q7Z698 418 aa18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 KAT2BQ92831 832 aa18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 JMJD4Q9H9V9 463 aa18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 HDAC6Q9UBN7 1215 aa18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 DDX41Q9UJV9 622 aaKnown RBP18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 MRVI1Q9Y6F6 885 aa18.05■□□□□ 0.48
SNRNP48-203ENST00000634363 PTPRSQ13332 1948 aa18.04■□□□□ 0.48
SNRNP48-203ENST00000634363 RBAK-RBAKDNI3L0D1 243 aa18.04■□□□□ 0.48
SNRNP48-203ENST00000634363 SORBS3O60504 671 aa18.04■□□□□ 0.48
SNRNP48-203ENST00000634363 GRB10Q13322 594 aa18.04■□□□□ 0.48
SNRNP48-203ENST00000634363 NECTIN1Q15223 517 aa18.04■□□□□ 0.48
SNRNP48-203ENST00000634363 LRRC8DQ7L1W4 858 aa18.04■□□□□ 0.48
SNRNP48-203ENST00000634363 DHX37Q8IY37 1157 aaKnown RBP18.04■□□□□ 0.48
SNRNP48-203ENST00000634363 ENAHQ8N8S7 591 aaPredicted RBP18.04■□□□□ 0.48
SNRNP48-203ENST00000634363 CTAGE1Q96RT6 745 aa18.04■□□□□ 0.48
SNRNP48-203ENST00000634363 LCHNA4D1U4 455 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 EIF3JO75822 258 aaKnown RBP18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 NR3C2P08235 984 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 ZNF286BP0CG31 522 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 CKBP12277 381 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 MYCLP12524 364 aaPredicted RBP18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 PSEN2P49810 448 aa18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 WDR5P61964 334 aaKnown RBP18.03■□□□□ 0.48
SNRNP48-203ENST00000634363 DEFB103AP81534 67 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms