RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 SAFBQ15424 915 aaKnown RBP eCLIP11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 DIS3L2Q8IYB7 885 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 MORC4Q8TE76 937 aa11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 CRYGNQ8WXF5 182 aa11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 KRTAP3-3Q9BYR6 98 aa11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 KRTAP3-2Q9BYR7 98 aa11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 ADD3Q9UEY8 706 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 SRRDQ9UH36 339 aa11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 PCDHA6Q9UN73 950 aa11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 PCDHA8Q9Y5H6 950 aa11.27□□□□□ -0.61
SOX2-OT-249ENST00000628810 SOWAHBA6NEL2 793 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 SPDYE3A6NKU9 549 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 BTBD18B2RXH4 712 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 H3BQV1 296 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 STX6O43752 255 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 PGK2P07205 417 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 HOXD10P28358 340 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 SREBF1P36956 1147 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 ALDH5A1P51649 535 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 FOSBP53539 338 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 GUCY1B3Q02153 619 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 CNTN2Q02246 1040 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 PRKCZQ05513 592 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 NR5A1Q13285 461 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 IFFO2Q5TF58 517 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 OLFML2BQ68BL8 750 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 MAMDC4Q6UXC1 1216 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 KRT25Q7Z3Z0 450 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 OXER1Q8TDS5 423 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 MAML3Q96JK9 1138 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 IPO9Q96P70 1041 aaKnown RBP11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 ANO3Q9BYT9 981 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 PXMP2Q9NR77 195 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 SLC5A4Q9NY91 659 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 MTMR6Q9Y217 621 aa11.26□□□□□ -0.61
SOX2-OT-249ENST00000628810 KIF28PB7ZC32 967 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 FLT3LGP49771 235 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 MMRN1Q13201 1228 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 JAKMIP3Q5VZ66 844 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 XRRA1Q6P2D8 792 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 OTOP1Q7RTM1 612 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 DPP9Q86TI2 863 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 NOSTRINQ8IVI9 506 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 TRMT44Q8IYL2 757 aaKnown RBP11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 NPLOC4Q8TAT6 608 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 RASGRP4Q8TDF6 673 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 NSUN6Q8TEA1 469 aaKnown RBP11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 PURBQ96QR8 312 aaKnown RBP11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 TAAR1Q96RJ0 339 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 IWS1Q96ST2 819 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 PDCD2LQ9BRP1 358 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 EHMT1Q9H9B1 1298 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 TMEM260Q9NX78 707 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 BIN2Q9UBW5 565 aaPredicted RBP11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 GABRQQ9UN88 632 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 SYNGAP1Q96PV0 1343 aa11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 ZNFX1Q9P2E3 1918 aaKnown RBP11.25□□□□□ -0.61
SOX2-OT-249ENST00000628810 HTTP42858 3142 aa11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 VPS37CA5D8V6 355 aaPredicted RBP11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 CYP3A4P08684 503 aa11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 LBX1P52954 281 aa11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 RESTQ13127 1097 aa11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 PGM5Q15124 567 aa11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 EARS2Q5JPH6 523 aaKnown RBP11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 PCNX4Q63HM2 1172 aa11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 BRAPQ7Z569 592 aa11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 FCHSD1Q86WN1 690 aa11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 PXYLP1Q8TE99 480 aa11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 MPHOSPH6Q99547 160 aaKnown RBP11.24□□□□□ -0.61
SOX2-OT-249ENST00000628810 CCDC194A0A1B0GVG4 234 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 ASB14A6NK59 587 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 EDIL3O43854 480 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 STAM2O75886 525 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 BRD1O95696 1058 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 ZSCAN22P10073 491 aaPredicted RBP11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 EIF2AK2P19525 551 aaKnown RBP11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 CIITAP33076 1130 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 TRAPPC10P48553 1259 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 USP11P51784 963 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 ARHGAP4P98171 946 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 PKP1Q13835 747 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 NONOQ15233 471 aaKnown RBP eCLIP11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 ARHGEF16Q5VV41 709 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 MOXD1Q6UVY6 613 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 VSIG10LQ86VR7 867 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 IL31RAQ8NI17 732 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 TBCKQ8TEA7 893 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 PGBD1Q96JS3 809 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 TINF2Q9BSI4 451 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 KATNBL1Q9H079 304 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 ZSCAN16Q9H4T2 348 aaPredicted RBP11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 PRDM10Q9NQV6 1147 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 FLRT1Q9NZU1 646 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 TRIM17Q9Y577 477 aa11.23□□□□□ -0.61
SOX2-OT-249ENST00000628810 CYP3A7-CYP3A51PA0A087WV96 503 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms