RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 FANCBQ8NB91 859 aa12.13□□□□□ -0.47
TMCO1-209ENST00000628579 ALDH8A1Q9H2A2 487 aaPredicted RBP12.13□□□□□ -0.47
TMCO1-209ENST00000628579 TRMT13Q9NUP7 481 aaKnown RBP12.13□□□□□ -0.47
TMCO1-209ENST00000628579 POLR3EQ9NVU0 708 aa12.13□□□□□ -0.47
TMCO1-209ENST00000628579 MAP3K20Q9NYL2 800 aaKnown RBP12.13□□□□□ -0.47
TMCO1-209ENST00000628579 DDX41Q9UJV9 622 aaKnown RBP12.13□□□□□ -0.47
TMCO1-209ENST00000628579 BRPF3Q9ULD4 1205 aa12.13□□□□□ -0.47
TMCO1-209ENST00000628579 SORBS3O60504 671 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 GH1P01241 217 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 MMP3P08254 477 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 CSF2RAP15509 400 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 SMARCA1P28370 1054 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 GNAQP50148 359 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 NBPF20Q3BBV1 942 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 MFSD5Q6N075 450 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 USP17L6PQ6QN14 398 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 TMTC3Q6ZXV5 915 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 VSIG10LQ86VR7 867 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 SAMD3Q8N6K7 520 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
TMCO1-209ENST00000628579 LZTS2Q9BRK4 669 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 MTG1Q9BT17 334 aaPredicted RBP12.12□□□□□ -0.47
TMCO1-209ENST00000628579 HIPK3Q9H422 1215 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 SEC63Q9UGP8 760 aaKnown RBP12.12□□□□□ -0.47
TMCO1-209ENST00000628579 MRVI1Q9Y6F6 885 aa12.12□□□□□ -0.47
TMCO1-209ENST00000628579 CDH23Q9H251 3354 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 MEIS2O14770 477 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 CCND2P30279 289 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 HSPA4P34932 840 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 CHMP4BP1P59074 171 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 SP2Q02086 613 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 KRT32Q14532 448 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 BRDTQ58F21 947 aaPredicted RBP12.11□□□□□ -0.47
TMCO1-209ENST00000628579 FAM47CQ5HY64 1035 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 GPR153Q6NV75 609 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 C16orf59Q7L2K0 433 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 DEFB123Q8N688 67 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 KCNB2Q92953 911 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 RNPC3Q96LT9 517 aaKnown RBP12.11□□□□□ -0.47
TMCO1-209ENST00000628579 NOC4LQ9BVI4 516 aaKnown RBP12.11□□□□□ -0.47
TMCO1-209ENST00000628579 SNX14Q9Y5W7 946 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 FRMPD4Q14CM0 1322 aa12.11□□□□□ -0.47
TMCO1-209ENST00000628579 MYH7BA7E2Y1 1941 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 KLF18A0A0U1RQI7 1052 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 ZBTB43O43298 467 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 KPNA6O60684 536 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 ACRP10323 421 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 CYP2C9P11712 490 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 UBA1P22314 1058 aaKnown RBP12.1□□□□□ -0.47
TMCO1-209ENST00000628579 CCL23P55773 120 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 MRPS9P82933 396 aaKnown RBP12.1□□□□□ -0.47
TMCO1-209ENST00000628579 SYNE3Q6ZMZ3 975 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 KAT2BQ92831 832 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
TMCO1-209ENST00000628579 JAKMIP1Q96N16 626 aaKnown RBP12.1□□□□□ -0.47
TMCO1-209ENST00000628579 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.1□□□□□ -0.472e-8■□□□□ 11.1
TMCO1-209ENST00000628579 SEZ6LQ9BYH1 1024 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 WNT8AQ9H1J5 351 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 BCAS3Q9H6U6 928 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 CNTNAP5Q8WYK1 1306 aa12.1□□□□□ -0.47
TMCO1-209ENST00000628579 PIK3CDO00329 1044 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 GGPS1O95749 300 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 ZNF286BP0CG31 522 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 FUT2Q10981 343 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 PPIGQ13427 754 aaKnown RBP eCLIP12.09□□□□□ -0.47
TMCO1-209ENST00000628579 RTN1Q16799 776 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 HSDL1Q3SXM5 330 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 TMEM240Q5SV17 173 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 CELF3Q5SZQ8 465 aaKnown RBP12.09□□□□□ -0.47
TMCO1-209ENST00000628579 MYSM1Q5VVJ2 828 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 FAM109BQ6ICB4 259 aaPredicted RBP12.09□□□□□ -0.47
TMCO1-209ENST00000628579 NFRKBQ6P4R8 1299 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 HEATR3Q7Z4Q2 680 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 DHX37Q8IY37 1157 aaKnown RBP12.09□□□□□ -0.47
TMCO1-209ENST00000628579 TMEM199Q8N511 208 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 PPTC7Q8NI37 304 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 SMARCC2Q8TAQ2 1214 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 SCLYQ96I15 445 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 FAM161BQ96MY7 647 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 PSTPIP2Q9H939 334 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 FAM217BQ9NTX9 383 aaPredicted RBP12.09□□□□□ -0.47
TMCO1-209ENST00000628579 MTMR10Q9NXD2 777 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 RTEL1Q9NZ71 1219 aa12.09□□□□□ -0.47
TMCO1-209ENST00000628579 GOLGA8AA7E2F4 631 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 GOLGA8BA8MQT2 603 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 RBAK-RBAKDNI3L0D1 243 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 REC8O95072 547 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 HMGB1P09429 215 aaKnown RBP12.08□□□□□ -0.48
TMCO1-209ENST00000628579 CASTP20810 708 aaKnown RBP12.08□□□□□ -0.48
TMCO1-209ENST00000628579 CDC27P30260 824 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 APOBRQ0VD83 1088 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 SEMA3FQ13275 785 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 LAMC2Q13753 1193 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 DGKDQ16760 1214 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 UBE2SQ16763 222 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 WWC2Q6AWC2 1192 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 TYW1BQ6NUM6 668 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 ZNF365Q70YC5 407 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 CUL5Q93034 780 aa12.08□□□□□ -0.48
TMCO1-209ENST00000628579 VWCEQ96DN2 955 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms