RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 MRPS27Q92552 414 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 USP6NLQ92738 828 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 TSR2Q969E8 191 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 RNF25Q96BH1 459 aaPredicted RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 FAM136AQ96C01 138 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CCDC51Q96ER9 411 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 RRP36Q96EU6 259 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 EPSTI1Q96J88 318 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 HIC2Q96JB3 615 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 PGBD1Q96JS3 809 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CCDC42Q96M95 316 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 NEK1Q96PY6 1258 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 GSDMAQ96QA5 445 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 RAB3IPQ96QF0 476 aaPredicted RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 SETDB2Q96T68 719 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SEC62Q99442 399 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 CDC5LQ99459 802 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 HNRNPABQ99729 332 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 HAUS7Q99871 368 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 DUSP9Q99956 384 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 SLF1Q9BQI6 1058 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SYT15Q9BQS2 421 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SIKE1Q9BRV8 207 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SPATA16Q9BXB7 569 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SEZ6LQ9BYH1 1024 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 FTOQ9C0B1 505 aaKnown RBP eCLIP2.1□□□□□ -2.07
TCF4-264ENST00000628391 SLC7A5P2Q9GIP4 190 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ZCWPW1Q9H0M4 648 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 EPB41L1Q9H4G0 881 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CNOT10Q9H9A5 744 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 MRPL44Q9H9J2 332 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 RNPEPL1Q9HAU8 725 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CLK4Q9HAZ1 481 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 FKBP14Q9NWM8 211 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 MKS1Q9NXB0 559 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CYP39A1Q9NYL5 469 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 IL20Q9NYY1 176 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CABP1Q9NZU7 370 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SEPT10Q9P0V9 454 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 DLGAP2Q9P1A6 1054 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SAMD15Q9P1V8 674 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CHPF2Q9P2E5 772 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 SAP30BPQ9UHR5 308 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 SLC12A6Q9UHW9 1150 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 HERC5Q9UII4 1024 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 CCPG1Q9ULG6 757 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 PPP1R9AQ9ULJ8 1098 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 RPL26L1Q9UNX3 145 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 SATB2Q9UPW6 733 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 LEMD3Q9Y2U8 911 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 CHMP3Q9Y3E7 222 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 FAM32AQ9Y421 112 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 LRRC42Q9Y546 428 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 TIMM22Q9Y584 194 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 PCDHB2Q9Y5E7 798 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ADGRG1Q9Y653 693 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 EMILIN1Q9Y6C2 1016 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 COMMD10Q9Y6G5 202 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 DDX60Q8IY21 1712 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 XRN1Q8IZH2 1706 aaKnown RBP2.1□□□□□ -2.07
TCF4-264ENST00000628391 NEDD4P46934 1319 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 MAP3K15Q6ZN16 1313 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 NCKAP5LQ9HCH0 1330 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ECM29Q5VYK3 1845 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 ARHGEF10O15013 1369 aa2.1□□□□□ -2.07
TCF4-264ENST00000628391 DEPDC5O75140 1603 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 PHRF1Q9P1Y6 1649 aaKnown RBP2.09□□□□□ -2.07
TCF4-264ENST00000628391 MYO5AQ9Y4I1 1855 aaKnown RBP2.09□□□□□ -2.07
TCF4-264ENST00000628391 TROQ12816 1431 aaPredicted RBP2.09□□□□□ -2.07
TCF4-264ENST00000628391 CLTCQ00610 1675 aaKnown RBP2.09□□□□□ -2.07
TCF4-264ENST00000628391 MYH7P12883 1935 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 BCL9LQ86UU0 1499 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 CPS1P31327 1500 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 ABCC1P33527 1531 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 ZFYVE16Q7Z3T8 1539 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 SMIM31A0A1B0GVY4 71 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 KANSL1LA0AUZ9 987 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 PABPN1LA6NDY0 278 aaKnown RBP2.09□□□□□ -2.07
TCF4-264ENST00000628391 GOLGA8CPA6NN73 597 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 FAM25EA8MYX2 175 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 TMEM114B3SHH9 223 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 AKR1B15C9JRZ8 316 aaPredicted RBP2.09□□□□□ -2.07
TCF4-264ENST00000628391 TNFRSF10AO00220 468 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 IGF2BP3O00425 579 aaKnown RBP eCLIP2.09□□□□□ -2.07
TCF4-264ENST00000628391 NVLO15381 856 aaKnown RBP2.09□□□□□ -2.07
TCF4-264ENST00000628391 TEX28O15482 410 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 ASAP2O43150 1006 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 MAP3K7O43318 606 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 STRNO43815 780 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 IDH3BO43837 385 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 ORC4O43929 436 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 CBFA2T3O75081 653 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 MFAP3LO75121 409 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 ATP2C2O75185 946 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 TACC1O75410 805 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 SERPINB7O75635 380 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 PDE5AO76074 875 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 TJP3O95049 919 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 LARGE1O95461 756 aa2.09□□□□□ -2.07
TCF4-264ENST00000628391 ASMTLO95671 621 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms