RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 VSIG10LQ86VR7 867 aa14.03□□□□□ -0.16
UBR1-212ENST00000627960 ZNF654Q8IZM8 581 aa14.03□□□□□ -0.16
UBR1-212ENST00000627960 TMEM87BQ96K49 555 aa14.03□□□□□ -0.16
UBR1-212ENST00000627960 WNT8AQ9H1J5 351 aa14.03□□□□□ -0.16
UBR1-212ENST00000627960 ANO2Q9NQ90 1003 aa14.03□□□□□ -0.16
UBR1-212ENST00000627960 TRIP12Q14669 1992 aaPredicted RBP14.03□□□□□ -0.16
UBR1-212ENST00000627960 SCN5AQ14524 2016 aa14.02□□□□□ -0.16
UBR1-212ENST00000627960 TMEM265A0A087WTH1 108 aa14.02□□□□□ -0.17
UBR1-212ENST00000627960 SH2B2O14492 632 aaPredicted RBP14.02□□□□□ -0.17
UBR1-212ENST00000627960 RGS20O76081 388 aa14.02□□□□□ -0.17
UBR1-212ENST00000627960 CYP2C9P11712 490 aa14.02□□□□□ -0.17
UBR1-212ENST00000627960 MYCLP12524 364 aaPredicted RBP14.02□□□□□ -0.17
UBR1-212ENST00000627960 SMARCA1P28370 1054 aa14.02□□□□□ -0.17
UBR1-212ENST00000627960 KIF5BP33176 963 aa14.02□□□□□ -0.17
UBR1-212ENST00000627960 COL9A3Q14050 684 aaPredicted RBP14.02□□□□□ -0.17
UBR1-212ENST00000627960 PGM5Q15124 567 aa14.02□□□□□ -0.17
UBR1-212ENST00000627960 FAM47CQ5HY64 1035 aa14.02□□□□□ -0.17
UBR1-212ENST00000627960 RPUSD2Q8IZ73 545 aaKnown RBP14.02□□□□□ -0.17
UBR1-212ENST00000627960 CTCFLQ8NI51 663 aaPredicted RBP14.02□□□□□ -0.17
UBR1-212ENST00000627960 PPP1R13LQ8WUF5 828 aa14.02□□□□□ -0.17
UBR1-212ENST00000627960 HERVK_113Q902F9 699 aa14.02□□□□□ -0.17
UBR1-212ENST00000627960 CDX2Q99626 313 aaPredicted RBP14.02□□□□□ -0.17
UBR1-212ENST00000627960 MYL10Q9BUA6 226 aa14.02□□□□□ -0.17
UBR1-212ENST00000627960 SPZ1Q9BXG8 430 aa14.02□□□□□ -0.17
UBR1-212ENST00000627960 MRVI1Q9Y6F6 885 aa14.02□□□□□ -0.17
UBR1-212ENST00000627960 GBF1Q92538 1859 aa14.01□□□□□ -0.17
UBR1-212ENST00000627960 CCDC69A6NI79 296 aa14.01□□□□□ -0.17
UBR1-212ENST00000627960 GRXCR1A8MXD5 290 aa14.01□□□□□ -0.17
UBR1-212ENST00000627960 CASTP20810 708 aaKnown RBP14.01□□□□□ -0.17
UBR1-212ENST00000627960 LAMC2Q13753 1193 aa14.01□□□□□ -0.17
UBR1-212ENST00000627960 KCNV1Q6PIU1 500 aa14.01□□□□□ -0.17
UBR1-212ENST00000627960 NFXL1Q6ZNB6 911 aa14.01□□□□□ -0.17
UBR1-212ENST00000627960 FCHSD1Q86WN1 690 aa14.01□□□□□ -0.17
UBR1-212ENST00000627960 IL31RAQ8NI17 732 aa14.01□□□□□ -0.17
UBR1-212ENST00000627960 PIBF1Q8WXW3 757 aa14.01□□□□□ -0.17
UBR1-212ENST00000627960 KAT2BQ92831 832 aa14.01□□□□□ -0.17
UBR1-212ENST00000627960 EMID1Q96A84 441 aaPredicted RBP14.01□□□□□ -0.17
UBR1-212ENST00000627960 SCLYQ96I15 445 aa14.01□□□□□ -0.17
UBR1-212ENST00000627960 LZTS2Q9BRK4 669 aa14.01□□□□□ -0.17
UBR1-212ENST00000627960 CALM1P0DP23 149 aa14□□□□□ -0.17
UBR1-212ENST00000627960 CALM2P0DP24 149 aa14□□□□□ -0.17
UBR1-212ENST00000627960 CALM3P0DP25 149 aa14□□□□□ -0.17
UBR1-212ENST00000627960 DNAJB2P25686 324 aa14□□□□□ -0.17
UBR1-212ENST00000627960 CCND2P30279 289 aa14□□□□□ -0.17
UBR1-212ENST00000627960 LIFRP42702 1097 aa14□□□□□ -0.17
UBR1-212ENST00000627960 GNAQP50148 359 aa14□□□□□ -0.17
UBR1-212ENST00000627960 DGKDQ16760 1214 aa14□□□□□ -0.17
UBR1-212ENST00000627960 DHX37Q8IY37 1157 aaKnown RBP14□□□□□ -0.17
UBR1-212ENST00000627960 VWCEQ96DN2 955 aa14□□□□□ -0.17
UBR1-212ENST00000627960 RRP36Q96EU6 259 aaKnown RBP14□□□□□ -0.17
UBR1-212ENST00000627960 MTIF3Q9H2K0 278 aaKnown RBP14□□□□□ -0.17
UBR1-212ENST00000627960 CXXC1Q9P0U4 656 aaPredicted RBP14□□□□□ -0.17
UBR1-212ENST00000627960 MYO9BQ13459 2157 aa13.99□□□□□ -0.17
UBR1-212ENST00000627960 PLEKHA8P1O95397 391 aa13.99□□□□□ -0.17
UBR1-212ENST00000627960 CHMP4BP1P59074 171 aa13.99□□□□□ -0.17
UBR1-212ENST00000627960 RNF20Q5VTR2 975 aa13.99□□□□□ -0.17
UBR1-212ENST00000627960 MYSM1Q5VVJ2 828 aa13.99□□□□□ -0.17
UBR1-212ENST00000627960 OTOP2Q7RTS6 562 aa13.99□□□□□ -0.17
UBR1-212ENST00000627960 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
UBR1-212ENST00000627960 SRBD1Q8N5C6 995 aaKnown RBP13.99□□□□□ -0.17
UBR1-212ENST00000627960 PPTC7Q8NI37 304 aa13.99□□□□□ -0.17
UBR1-212ENST00000627960 MYLIPQ8WY64 445 aa13.99□□□□□ -0.17
UBR1-212ENST00000627960 ZFP91Q96JP5 570 aaPredicted RBP13.99□□□□□ -0.17
UBR1-212ENST00000627960 PBX4Q9BYU1 374 aa13.99□□□□□ -0.17
UBR1-212ENST00000627960 TANC1Q9C0D5 1861 aa13.99□□□□□ -0.17
UBR1-212ENST00000627960 FRMPD4Q14CM0 1322 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 DOCK5Q9H7D0 1870 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 PPFIA4O75335 1185 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 PFKMP08237 780 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 TGFB3P10600 412 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 HOXD8P13378 290 aaPredicted RBP13.98□□□□□ -0.17
UBR1-212ENST00000627960 RXRAP19793 462 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 RFC2P35250 354 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 PBX2P40425 430 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 PSEN2P49810 448 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 MRPS9P82933 396 aaKnown RBP13.98□□□□□ -0.17
UBR1-212ENST00000627960 SP2Q02086 613 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 BFSP2Q13515 415 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 PTGISQ16647 500 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 CELF3Q5SZQ8 465 aaKnown RBP13.98□□□□□ -0.17
UBR1-212ENST00000627960 GDF6Q6KF10 455 aaPredicted RBP13.98□□□□□ -0.17
UBR1-212ENST00000627960 SGMS1Q86VZ5 419 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 CMTR1Q8N1G2 835 aaKnown RBP13.98□□□□□ -0.17
UBR1-212ENST00000627960 FANCBQ8NB91 859 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 RETREG2Q8NC44 543 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 GPKOWQ92917 476 aaPredicted RBP eCLIP13.98□□□□□ -0.17
UBR1-212ENST00000627960 TIFAQ96CG3 184 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 LRRC2Q9BYS8 371 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 SEC63Q9UGP8 760 aaKnown RBP13.98□□□□□ -0.17
UBR1-212ENST00000627960 NOD1Q9Y239 953 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 SLC12A7Q9Y666 1083 aa13.98□□□□□ -0.17
UBR1-212ENST00000627960 TET1Q8NFU7 2136 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 HAS3O00219 553 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 PIK3CDO00329 1044 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 MEIS2O14770 477 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 CDC45O75419 566 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 STAM2O75886 525 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 GGPS1O95749 300 aa13.97□□□□□ -0.17
UBR1-212ENST00000627960 F2P00734 622 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms