RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 RTEL1Q9NZ71 1219 aa21.49■■□□□ 1.03
MECP2-216ENST00000627864 DAXXQ9UER7 740 aaPredicted RBP21.49■■□□□ 1.03
MECP2-216ENST00000627864 ZHX1Q9UKY1 873 aaPredicted RBP21.49■■□□□ 1.03
MECP2-216ENST00000627864 EIF3JO75822 258 aaKnown RBP21.48■■□□□ 1.03
MECP2-216ENST00000627864 MRPS9P82933 396 aaKnown RBP21.48■■□□□ 1.03
MECP2-216ENST00000627864 INF2Q27J81 1249 aa21.48■■□□□ 1.03
MECP2-216ENST00000627864 XRRA1Q6P2D8 792 aa21.48■■□□□ 1.03
MECP2-216ENST00000627864 FBXO16Q8IX29 292 aaPredicted RBP21.48■■□□□ 1.03
MECP2-216ENST00000627864 TRPV1Q8NER1 839 aa21.48■■□□□ 1.03
MECP2-216ENST00000627864 TBCKQ8TEA7 893 aa21.48■■□□□ 1.03
MECP2-216ENST00000627864 FOXP1Q9H334 677 aaPredicted RBP21.48■■□□□ 1.03
MECP2-216ENST00000627864 VTA1Q9NP79 307 aa21.48■■□□□ 1.03
MECP2-216ENST00000627864 FAM205CA6NFA0 338 aa21.47■■□□□ 1.03
MECP2-216ENST00000627864 KIF28PB7ZC32 967 aa21.47■■□□□ 1.03
MECP2-216ENST00000627864 MYCP01106 439 aaPredicted RBP21.47■■□□□ 1.03
MECP2-216ENST00000627864 CYBAP13498 195 aa21.47■■□□□ 1.03
MECP2-216ENST00000627864 CNGA1P29973 690 aa21.47■■□□□ 1.03
MECP2-216ENST00000627864 ZNF76P36508 570 aa21.47■■□□□ 1.03
MECP2-216ENST00000627864 EARS2Q5JPH6 523 aaKnown RBP21.47■■□□□ 1.03
MECP2-216ENST00000627864 COL13A1Q5TAT6 717 aaPredicted RBP21.47■■□□□ 1.03
MECP2-216ENST00000627864 MAP3K21Q5TCX8 1036 aa21.47■■□□□ 1.03
MECP2-216ENST00000627864 SEPT14Q6ZU15 432 aa21.47■■□□□ 1.03
MECP2-216ENST00000627864 KATNBL1Q9H079 304 aa21.47■■□□□ 1.03
MECP2-216ENST00000627864 ZNF865P0CJ78 1059 aaPredicted RBP21.46■■□□□ 1.03
MECP2-216ENST00000627864 CCND3P30281 292 aaPredicted RBP21.46■■□□□ 1.03
MECP2-216ENST00000627864 CRYGNQ8WXF5 182 aa21.46■■□□□ 1.03
MECP2-216ENST00000627864 PDGFCQ9NRA1 345 aa21.46■■□□□ 1.03
MECP2-216ENST00000627864 NRBP1Q9UHY1 535 aa21.46■■□□□ 1.03
MECP2-216ENST00000627864 FRMPD3Q5JV73 1810 aa21.45■■□□□ 1.03
MECP2-216ENST00000627864 STX6O43752 255 aa21.45■■□□□ 1.02
MECP2-216ENST00000627864 STAM2O75886 525 aa21.45■■□□□ 1.02
MECP2-216ENST00000627864 CYP3A4P08684 503 aa21.45■■□□□ 1.02
MECP2-216ENST00000627864 U2AF2P26368 475 aaKnown RBP eCLIP21.45■■□□□ 1.02
MECP2-216ENST00000627864 USP11P51784 963 aa21.45■■□□□ 1.02
MECP2-216ENST00000627864 TAPT1Q6NXT6 567 aa21.45■■□□□ 1.02
MECP2-216ENST00000627864 NOSTRINQ8IVI9 506 aa21.45■■□□□ 1.02
MECP2-216ENST00000627864 HMX1Q9NP08 348 aaPredicted RBP21.45■■□□□ 1.02
MECP2-216ENST00000627864 MYH15Q9Y2K3 1946 aa21.45■■□□□ 1.02
MECP2-216ENST00000627864 RGS20O76081 388 aa21.44■■□□□ 1.02
MECP2-216ENST00000627864 MTFR1Q15390 333 aa21.44■■□□□ 1.02
MECP2-216ENST00000627864 CCDC144BQ3MJ40 725 aa21.44■■□□□ 1.02
MECP2-216ENST00000627864 NLRX1Q86UT6 975 aa21.44■■□□□ 1.02
MECP2-216ENST00000627864 ARMC5Q96C12 935 aa21.44■■□□□ 1.02
MECP2-216ENST00000627864 MXRA8Q9BRK3 442 aa21.44■■□□□ 1.02
MECP2-216ENST00000627864 UNC93B1Q9H1C4 597 aa21.44■■□□□ 1.02
MECP2-216ENST00000627864 FAM184BQ9ULE4 1060 aa21.44■■□□□ 1.02
MECP2-216ENST00000627864 MTMR6Q9Y217 621 aa21.44■■□□□ 1.02
MECP2-216ENST00000627864 UBIAD1Q9Y5Z9 338 aa21.44■■□□□ 1.02
MECP2-216ENST00000627864 EDIL3O43854 480 aa21.43■■□□□ 1.02
MECP2-216ENST00000627864 CCL5P13501 91 aa21.43■■□□□ 1.02
MECP2-216ENST00000627864 ADCYAP1R1P41586 468 aa21.43■■□□□ 1.02
MECP2-216ENST00000627864 LETM2Q2VYF4 491 aa21.43■■□□□ 1.02
MECP2-216ENST00000627864 GNPTABQ3T906 1256 aa21.43■■□□□ 1.02
MECP2-216ENST00000627864 IQSEC1Q6DN90 963 aa21.43■■□□□ 1.02
MECP2-216ENST00000627864 NEK8Q86SG6 692 aa21.43■■□□□ 1.02
MECP2-216ENST00000627864 FERMT3Q86UX7 667 aa21.43■■□□□ 1.02
MECP2-216ENST00000627864 CYP2W1Q8TAV3 490 aa21.43■■□□□ 1.02
MECP2-216ENST00000627864 ZNF333Q96JL9 665 aa21.43■■□□□ 1.02
MECP2-216ENST00000627864 INPP4AQ96PE3 977 aaPredicted RBP21.43■■□□□ 1.02
MECP2-216ENST00000627864 WDR11Q9BZH6 1224 aa21.43■■□□□ 1.02
MECP2-216ENST00000627864 RBM47A0AV96 593 aaKnown RBP21.42■■□□□ 1.02
MECP2-216ENST00000627864 ITGB5P18084 799 aa21.42■■□□□ 1.02
MECP2-216ENST00000627864 ATP2B1P20020 1258 aa21.42■■□□□ 1.02
MECP2-216ENST00000627864 CEP55Q53EZ4 464 aa21.42■■□□□ 1.02
MECP2-216ENST00000627864 SCFD2Q8WU76 684 aa21.42■■□□□ 1.02
MECP2-216ENST00000627864 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.42■■□□□ 1.022e-6■■■■■ 36
MECP2-216ENST00000627864 RNF208Q9H0X6 261 aa21.42■■□□□ 1.02
MECP2-216ENST00000627864 JADE2Q9NQC1 790 aa21.42■■□□□ 1.02
MECP2-216ENST00000627864 MRVI1Q9Y6F6 885 aa21.42■■□□□ 1.02
MECP2-216ENST00000627864 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.41■■□□□ 1.02
MECP2-216ENST00000627864 FAM86B1E9PN63 330 aa21.41■■□□□ 1.02
MECP2-216ENST00000627864 SEPT4O43236 478 aa21.41■■□□□ 1.02
MECP2-216ENST00000627864 FAM86B2P0C5J1 330 aa21.41■■□□□ 1.02
MECP2-216ENST00000627864 TXNP10599 105 aaKnown RBP21.41■■□□□ 1.02
MECP2-216ENST00000627864 PDIA4P13667 645 aaKnown RBP21.41■■□□□ 1.02
MECP2-216ENST00000627864 AKR1A1P14550 325 aa21.41■■□□□ 1.02
MECP2-216ENST00000627864 CIITAP33076 1130 aa21.41■■□□□ 1.02
MECP2-216ENST00000627864 TNFAIP2Q03169 654 aa21.41■■□□□ 1.02
MECP2-216ENST00000627864 TTLL4Q14679 1199 aa21.41■■□□□ 1.02
MECP2-216ENST00000627864 FOXD4L5Q5VV16 416 aaPredicted RBP21.41■■□□□ 1.02
MECP2-216ENST00000627864 ANO1Q5XXA6 986 aa21.41■■□□□ 1.02
MECP2-216ENST00000627864 PLA2G4DQ86XP0 818 aa21.41■■□□□ 1.02
MECP2-216ENST00000627864 FOXD4L4Q8WXT5 416 aaPredicted RBP21.41■■□□□ 1.02
MECP2-216ENST00000627864 GPRASP2Q96D09 838 aa21.41■■□□□ 1.02
MECP2-216ENST00000627864 NOL7Q9UMY1 257 aaKnown RBP21.41■■□□□ 1.02
MECP2-216ENST00000627864 SPATA31C2B4DYI2 1134 aa21.4■■□□□ 1.02
MECP2-216ENST00000627864 MEIS1O00470 390 aa21.4■■□□□ 1.02
MECP2-216ENST00000627864 FIBPO43427 364 aa21.4■■□□□ 1.02
MECP2-216ENST00000627864 CCNT1O60563 726 aaKnown RBP21.4■■□□□ 1.02
MECP2-216ENST00000627864 ARIH2O95376 493 aa21.4■■□□□ 1.02
MECP2-216ENST00000627864 TDP2O95551 362 aa21.4■■□□□ 1.02
MECP2-216ENST00000627864 SMPD1P17405 629 aa21.4■■□□□ 1.02
MECP2-216ENST00000627864 ICAM3P32942 547 aa21.4■■□□□ 1.02
MECP2-216ENST00000627864 MTMR1Q13613 665 aa21.4■■□□□ 1.02
MECP2-216ENST00000627864 PRR16Q569H4 304 aa21.4■■□□□ 1.02
MECP2-216ENST00000627864 TMEM63BQ5T3F8 832 aa21.4■■□□□ 1.02
MECP2-216ENST00000627864 KCNV1Q6PIU1 500 aa21.4■■□□□ 1.02
MECP2-216ENST00000627864 NIPA1Q7RTP0 329 aa21.4■■□□□ 1.02
MECP2-216ENST00000627864 NAP1L4Q99733 375 aaKnown RBP21.4■■□□□ 1.02
MECP2-216ENST00000627864 IGLV3-22A0A075B6J6 115 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms