RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 PGM5Q15124 567 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 Q6ZUG5 572 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 DHX32Q7L7V1 743 aaKnown RBP9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 SPRED2Q7Z698 418 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 SGMS1Q86VZ5 419 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 TRIM50Q86XT4 487 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 TMTC2Q8N394 836 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 SLC43A3Q8NBI5 491 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 AFG1LQ8WV93 481 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 DHX38Q92620 1227 aaKnown RBP9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 ZBTB10Q96DT7 871 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 IL17RAQ96F46 866 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 TMEM87BQ96K49 555 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 AIFM3Q96NN9 605 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 RMDN3Q96TC7 470 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 SPZ1Q9BXG8 430 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 AMNQ9BXJ7 453 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 UPF3BQ9BZI7 483 aaKnown RBP9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 WNT8AQ9H1J5 351 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 VTA1Q9NP79 307 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 STARD7Q9NQZ5 370 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 NR2E3Q9Y5X4 410 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 CYP46A1Q9Y6A2 500 aa9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 SPTBN5Q9NRC6 3674 aaKnown RBP9.36□□□□□ -0.91
SPTAN1-213ENST00000627809 FRMPD4Q14CM0 1322 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 KLF18A0A0U1RQI7 1052 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 DDAH1O94760 285 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 NR3C2P08235 984 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 MYL3P08590 195 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 CASTP20810 708 aaKnown RBP9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 RBM25P49756 843 aaKnown RBP9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 PDE4DQ08499 809 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 ST3GAL1Q11201 340 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 GPNMBQ14956 572 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 PKN1Q16512 942 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 NFXL1Q6ZNB6 911 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 RUFY3Q7L099 469 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 CATIPQ7Z7H3 387 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 RNF180Q86T96 592 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 OR6J1Q8NGC5 347 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 CYP2W1Q8TAV3 490 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 BRF1Q92994 677 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 SCLYQ96I15 445 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 UBE2OQ9C0C9 1292 aaKnown RBP9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 ZSWIM6Q9HCJ5 1215 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 GJB4Q9NTQ9 266 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 RTEL1Q9NZ71 1219 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 CXXC1Q9P0U4 656 aaPredicted RBP9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 KIAA1671Q9BY89 1806 aa9.35□□□□□ -0.91
SPTAN1-213ENST00000627809 MYH9P35579 1960 aaKnown RBP9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 PNMA6FA0A0J9YX94 578 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 ARVCFO00192 962 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 KIAA0355O15063 1070 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 ATP9AO75110 1047 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 ARHGEF15O94989 841 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 MMP3P08254 477 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 CLTBP09497 229 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 TXNP10599 105 aaKnown RBP9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 CSF2RAP15509 400 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 UBA1P22314 1058 aaKnown RBP9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 RPS6KB1P23443 525 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 LIFRP42702 1097 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 FGD1P98174 961 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 NTRK3Q16288 839 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 NBPF20Q3BBV1 942 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 HSDL1Q3SXM5 330 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 C1orf53Q5VUE5 145 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 ANKRD33Q7Z3H0 272 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 FANCBQ8NB91 859 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 RGS22Q8NE09 1264 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 IL27Q8NEV9 243 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 RASGRP4Q8TDF6 673 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 PHKBQ93100 1093 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 FAM161BQ96MY7 647 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 TBC1D32Q96NH3 1257 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 PKD2L1Q9P0L9 805 aa9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 DDX41Q9UJV9 622 aaKnown RBP9.34□□□□□ -0.91
SPTAN1-213ENST00000627809 TRANK1O15050 2925 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 COL4A6Q14031 1691 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 CCDC69A6NI79 296 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 GOLGA8BA8MQT2 603 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 STXBP3O00186 592 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 ITGB5P18084 799 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 BMP8BP34820 402 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 PBX2P40425 430 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 CCL23P55773 120 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 CCT2P78371 535 aaKnown RBP9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 ITGA7Q13683 1181 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 PPP2R5BQ15173 497 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 ARHGEF16Q5VV41 709 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 IQSEC1Q6DN90 963 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 GDF6Q6KF10 455 aaPredicted RBP9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 TMCO2Q7Z6W1 182 aaPredicted RBP9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 TDHQ8IZJ6 230 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 FBXL16Q8N461 479 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 DNERQ8NFT8 737 aa9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 TSEN34Q9BSV6 310 aaKnown RBP9.33□□□□□ -0.92
SPTAN1-213ENST00000627809 NOC4LQ9BVI4 516 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms