RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 ZNF592Q92610 1267 aa9.01□□□□□ -0.97
TCF4-260ENST00000627685 MAP4K1Q92918 833 aa9.01□□□□□ -0.97
TCF4-260ENST00000627685 AGBL1Q96MI9 1066 aa9.01□□□□□ -0.97
TCF4-260ENST00000627685 ZKSCAN3Q9BRR0 538 aa9.01□□□□□ -0.97
TCF4-260ENST00000627685 HTATIP2Q9BUP3 242 aa9.01□□□□□ -0.97
TCF4-260ENST00000627685 TEX13BQ9BXU2 312 aa9.01□□□□□ -0.97
TCF4-260ENST00000627685 RANBP17Q9H2T7 1088 aaKnown RBP9.01□□□□□ -0.97
TCF4-260ENST00000627685 CPVLQ9H3G5 476 aa9.01□□□□□ -0.97
TCF4-260ENST00000627685 MROH8Q9H579 483 aa9.01□□□□□ -0.97
TCF4-260ENST00000627685 PRR12Q9ULL5 1215 aa9.01□□□□□ -0.97
TCF4-260ENST00000627685 DDX49Q9Y6V7 483 aaKnown RBP9.01□□□□□ -0.97
TCF4-260ENST00000627685 TMEM232C9JQI7 657 aa9□□□□□ -0.97
TCF4-260ENST00000627685 HIP1O00291 1037 aa9□□□□□ -0.97
TCF4-260ENST00000627685 RANBP6O60518 1105 aaKnown RBP9□□□□□ -0.97
TCF4-260ENST00000627685 FARP2O94887 1054 aaPredicted RBP9□□□□□ -0.97
TCF4-260ENST00000627685 ZNF865P0CJ78 1059 aaPredicted RBP9□□□□□ -0.97
TCF4-260ENST00000627685 TOP1P11387 765 aaKnown RBP9□□□□□ -0.97
TCF4-260ENST00000627685 MCCP23508 829 aa9□□□□□ -0.97
TCF4-260ENST00000627685 STAT3P40763 770 aa9□□□□□ -0.97
TCF4-260ENST00000627685 OAZ1P54368 228 aa9□□□□□ -0.97
TCF4-260ENST00000627685 RELBQ01201 579 aa9□□□□□ -0.97
TCF4-260ENST00000627685 ZNF543Q08ER8 600 aa9□□□□□ -0.97
TCF4-260ENST00000627685 TMEM132AQ24JP5 1023 aa9□□□□□ -0.97
TCF4-260ENST00000627685 MUM1L1Q5H9M0 696 aa9□□□□□ -0.97
TCF4-260ENST00000627685 MB21D2Q8IYB1 491 aaPredicted RBP9□□□□□ -0.97
TCF4-260ENST00000627685 FAM133AQ8N9E0 248 aa9□□□□□ -0.97
TCF4-260ENST00000627685 PRPF38AQ8NAV1 312 aaKnown RBP9□□□□□ -0.97
TCF4-260ENST00000627685 CLEC4DQ8WXI8 215 aa9□□□□□ -0.97
TCF4-260ENST00000627685 ESYT1Q9BSJ8 1104 aa9□□□□□ -0.97
TCF4-260ENST00000627685 RAVER2Q9HCJ3 691 aaKnown RBP9□□□□□ -0.97
TCF4-260ENST00000627685 ZSWIM5Q9P217 1185 aa9□□□□□ -0.97
TCF4-260ENST00000627685 FEM1BQ9UK73 627 aa9□□□□□ -0.97
TCF4-260ENST00000627685 STX8Q9UNK0 236 aa9□□□□□ -0.97
TCF4-260ENST00000627685 CEP290O15078 2479 aa9□□□□□ -0.97
TCF4-260ENST00000627685 RANBP2P49792 3224 aaKnown RBP8.99□□□□□ -0.97
TCF4-260ENST00000627685 OPLAHO14841 1288 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 CTAGE5O15320 804 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 MAN1A2O60476 641 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 SLC25A27O95847 323 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 SNAI1O95863 264 aaPredicted RBP8.99□□□□□ -0.97
TCF4-260ENST00000627685 TFRCP02786 760 aaKnown RBP8.99□□□□□ -0.97
TCF4-260ENST00000627685 SLC3A2P08195 630 aaKnown RBP8.99□□□□□ -0.97
TCF4-260ENST00000627685 PTGS1P23219 599 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 COPB2P35606 906 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 SLC16A2P36021 539 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 STAT2P52630 851 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 NECTIN1Q15223 517 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 RRP12Q5JTH9 1297 aaKnown RBP8.99□□□□□ -0.97
TCF4-260ENST00000627685 PRAMEF19Q5SWL8 479 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 SNRNP48Q6IEG0 339 aaKnown RBP8.99□□□□□ -0.97
TCF4-260ENST00000627685 MAMDC4Q6UXC1 1216 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 NCAPG2Q86XI2 1143 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 DCAF4Q8WV16 495 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 LENG1Q96BZ8 264 aaPredicted RBP8.99□□□□□ -0.97
TCF4-260ENST00000627685 CHMP4CQ96CF2 233 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 MTMR8Q96EF0 704 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 CWC22Q9HCG8 908 aaKnown RBP8.99□□□□□ -0.97
TCF4-260ENST00000627685 A1CFQ9NQ94 594 aaKnown RBP8.99□□□□□ -0.97
TCF4-260ENST00000627685 CYLDQ9NQC7 956 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 IVNS1ABPQ9Y6Y0 642 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 TNKSO95271 1327 aa8.99□□□□□ -0.97
TCF4-260ENST00000627685 FRMPD2Q68DX3 1309 aaPredicted RBP8.99□□□□□ -0.97
TCF4-260ENST00000627685 E7EWF7 191 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 NFIBO00712 420 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 ZNF213O14771 459 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 MSCO60682 206 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 PPP1R11O60927 126 aaPredicted RBP8.98□□□□□ -0.97
TCF4-260ENST00000627685 LILRA1O75019 489 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 TMEM63BQ5T3F8 832 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 RNF20Q5VTR2 975 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 MFSD14CQ5VZR4 134 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 TREML4Q6UXN2 200 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 MFSD6Q6ZSS7 791 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 NECAB2Q7Z6G3 386 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 FAM160B2Q86V87 743 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 DGKHQ86XP1 1220 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 STAG2Q8N3U4 1231 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 MORC4Q8TE76 937 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 TTC14Q96N46 770 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 MMP19Q99542 508 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 SLC5A4Q9NY91 659 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 DIS3Q9Y2L1 958 aaKnown RBP8.98□□□□□ -0.97
TCF4-260ENST00000627685 RBM8AQ9Y5S9 174 aaKnown RBP8.98□□□□□ -0.97
TCF4-260ENST00000627685 LTBP2Q14767 1821 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 PLXNA1Q9UIW2 1896 aa8.98□□□□□ -0.97
TCF4-260ENST00000627685 TERTO14746 1132 aaKnown RBP8.97□□□□□ -0.97
TCF4-260ENST00000627685 CYTH3O43739 400 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 ADAMTS4O75173 837 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 ICAM1P05362 532 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 FCER1AP12319 257 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 ADD1P35611 737 aaKnown RBP8.97□□□□□ -0.97
TCF4-260ENST00000627685 SLC1A4P43007 532 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 NT5C2P49902 561 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 MFAP1P55081 439 aaKnown RBP8.97□□□□□ -0.97
TCF4-260ENST00000627685 CNTN2Q02246 1040 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 VAC14Q08AM6 782 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 TROAPQ12815 778 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 PLS1Q14651 629 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 SYDE2Q5VT97 1194 aa8.97□□□□□ -0.97
TCF4-260ENST00000627685 CCSAPQ6IQ19 270 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms