RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 TGFB3P10600 412 aa19.24■□□□□ 0.67
UBE3D-208ENST00000626828 IFNAR1P17181 557 aa19.24■□□□□ 0.67
UBE3D-208ENST00000626828 CPT1AP50416 773 aa19.24■□□□□ 0.67
UBE3D-208ENST00000626828 ANKRD1Q15327 319 aa19.24■□□□□ 0.67
UBE3D-208ENST00000626828 NTRK3Q16288 839 aa19.24■□□□□ 0.67
UBE3D-208ENST00000626828 PFKFB3Q16875 520 aaPredicted RBP19.24■□□□□ 0.67
UBE3D-208ENST00000626828 PPP1R18Q6NYC8 613 aa19.24■□□□□ 0.67
UBE3D-208ENST00000626828 POLR3EQ9NVU0 708 aa19.24■□□□□ 0.67
UBE3D-208ENST00000626828 BARHL2Q9NY43 387 aa19.24■□□□□ 0.67
UBE3D-208ENST00000626828 DDX41Q9UJV9 622 aaKnown RBP19.24■□□□□ 0.67
UBE3D-208ENST00000626828 SMCO2A6NFE2 343 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 KPNA6O60684 536 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 ARIH2O95376 493 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 GH1P01241 217 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 SCG2P13521 617 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 PTGS1P23219 599 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 LY6KQ17RY6 165 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 CPLX2Q6PUV4 134 aaKnown RBP19.23■□□□□ 0.67
UBE3D-208ENST00000626828 COPS5Q92905 334 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 TOX2Q96NM4 488 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 RNF26Q9BY78 433 aaPredicted RBP19.23■□□□□ 0.67
UBE3D-208ENST00000626828 SEZ6LQ9BYH1 1024 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 RIC8AQ9NPQ8 531 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 PRKAG2Q9UGJ0 569 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 ZMYND8Q9ULU4 1186 aaPredicted RBP19.23■□□□□ 0.67
UBE3D-208ENST00000626828 MRVI1Q9Y6F6 885 aa19.23■□□□□ 0.67
UBE3D-208ENST00000626828 MYH7BA7E2Y1 1941 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 A6NJR5 290 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 SPDYE3A6NKU9 549 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 STXBP3O00186 592 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 CPLX1O14810 134 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 RGS20O76081 388 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 FOSP01100 380 aaPredicted RBP19.22■□□□□ 0.67
UBE3D-208ENST00000626828 CDK7P50613 346 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 TLE2Q04725 743 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 TRIM60Q495X7 471 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 C8orf34Q49A92 452 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 CXCL17Q6UXB2 119 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 IL31RAQ8NI17 732 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 LARP6Q9BRS8 491 aaKnown RBP19.22■□□□□ 0.67
UBE3D-208ENST00000626828 NCOA5Q9HCD5 579 aaKnown RBP19.22■□□□□ 0.67
UBE3D-208ENST00000626828 LRRC37A2A6NM11 1700 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 FRMPD4Q14CM0 1322 aa19.22■□□□□ 0.67
UBE3D-208ENST00000626828 A0A0U1RQG5 324 aaPredicted RBP19.21■□□□□ 0.67
UBE3D-208ENST00000626828 DCDC2CA8MYV0 355 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 ARVCFO00192 962 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 SYN1P17600 705 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 ADCY7P51828 1080 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 MRPS9P82933 396 aaKnown RBP19.21■□□□□ 0.67
UBE3D-208ENST00000626828 LAMC2Q13753 1193 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 PKN1Q16512 942 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 GNPTABQ3T906 1256 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 PCNX4Q63HM2 1172 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 TYW1BQ6NUM6 668 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 ANKRD33Q7Z3H0 272 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 CCDC12Q8WUD4 166 aaPredicted RBP19.21■□□□□ 0.67
UBE3D-208ENST00000626828 PHKBQ93100 1093 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 SLC26A6Q9BXS9 759 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 EHMT1Q9H9B1 1298 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 PCDHA6Q9UN73 950 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 PCDHA8Q9Y5H6 950 aa19.21■□□□□ 0.67
UBE3D-208ENST00000626828 ICAM3P32942 547 aa19.2■□□□□ 0.66
UBE3D-208ENST00000626828 NEK4P51957 841 aa19.2■□□□□ 0.66
UBE3D-208ENST00000626828 SSRP1Q08945 709 aaKnown RBP19.2■□□□□ 0.66
UBE3D-208ENST00000626828 UBE2SQ16763 222 aa19.2■□□□□ 0.66
UBE3D-208ENST00000626828 DHX37Q8IY37 1157 aaKnown RBP19.2■□□□□ 0.66
UBE3D-208ENST00000626828 TRIM22Q8IYM9 498 aa19.2■□□□□ 0.66
UBE3D-208ENST00000626828 ZFP91Q96JP5 570 aaPredicted RBP19.2■□□□□ 0.66
UBE3D-208ENST00000626828 SLKQ9H2G2 1235 aaPredicted RBP19.2■□□□□ 0.66
UBE3D-208ENST00000626828 RTEL1Q9NZ71 1219 aa19.2■□□□□ 0.66
UBE3D-208ENST00000626828 MROH7Q68CQ1 1323 aa19.2■□□□□ 0.66
UBE3D-208ENST00000626828 DNAH12Q6ZR08 3092 aa19.19■□□□□ 0.66
UBE3D-208ENST00000626828 SPATA31C2B4DYI2 1134 aa19.19■□□□□ 0.66
UBE3D-208ENST00000626828 MYL3P08590 195 aa19.19■□□□□ 0.66
UBE3D-208ENST00000626828 ARHGAP1Q07960 439 aa19.19■□□□□ 0.66
UBE3D-208ENST00000626828 STK3Q13188 491 aa19.19■□□□□ 0.66
UBE3D-208ENST00000626828 ITGA7Q13683 1181 aa19.19■□□□□ 0.66
UBE3D-208ENST00000626828 MCTP2Q6DN12 878 aa19.19■□□□□ 0.66
UBE3D-208ENST00000626828 NLRX1Q86UT6 975 aa19.19■□□□□ 0.66
UBE3D-208ENST00000626828 AFG1LQ8WV93 481 aa19.19■□□□□ 0.66
UBE3D-208ENST00000626828 EMID1Q96A84 441 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-208ENST00000626828 INPP4AQ96PE3 977 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-208ENST00000626828 MTG1Q9BT17 334 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-208ENST00000626828 C6orf50Q9HD87 102 aa19.19■□□□□ 0.66
UBE3D-208ENST00000626828 COLQQ9Y215 455 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-208ENST00000626828 ESYT2A0FGR8 921 aa19.18■□□□□ 0.66
UBE3D-208ENST00000626828 PQBP1O60828 265 aaKnown RBP19.18■□□□□ 0.66
UBE3D-208ENST00000626828 GNA11P29992 359 aa19.18■□□□□ 0.66
UBE3D-208ENST00000626828 AK2P54819 239 aa19.18■□□□□ 0.66
UBE3D-208ENST00000626828 PURAQ00577 322 aaKnown RBP19.18■□□□□ 0.66
UBE3D-208ENST00000626828 CELF3Q5SZQ8 465 aaKnown RBP19.18■□□□□ 0.66
UBE3D-208ENST00000626828 MYSM1Q5VVJ2 828 aa19.18■□□□□ 0.66
UBE3D-208ENST00000626828 CHRDL2Q6WN34 429 aa19.18■□□□□ 0.66
UBE3D-208ENST00000626828 SLC43A3Q8NBI5 491 aa19.18■□□□□ 0.66
UBE3D-208ENST00000626828 ZMYND12Q9H0C1 365 aa19.18■□□□□ 0.66
UBE3D-208ENST00000626828 TPCN1Q9ULQ1 816 aa19.18■□□□□ 0.66
UBE3D-208ENST00000626828 TLR3O15455 904 aaKnown RBP19.17■□□□□ 0.66
UBE3D-208ENST00000626828 MAFGO15525 162 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 FIBPO43427 364 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 PFKFB2O60825 505 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms