RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 KIF22Q14807 665 aa18.89■□□□□ 0.61
CCNA1-203ENST00000625767 SF3A1Q15459 793 aaKnown RBP18.89■□□□□ 0.61
CCNA1-203ENST00000625767 PCNX4Q63HM2 1172 aa18.89■□□□□ 0.61
CCNA1-203ENST00000625767 VSIG10LQ86VR7 867 aa18.89■□□□□ 0.61
CCNA1-203ENST00000625767 POTEDQ86YR6 584 aa18.89■□□□□ 0.61
CCNA1-203ENST00000625767 LENG9Q96B70 501 aa18.89■□□□□ 0.61
CCNA1-203ENST00000625767 TMEM60Q9H2L4 133 aa18.89■□□□□ 0.61
CCNA1-203ENST00000625767 EHMT1Q9H9B1 1298 aa18.89■□□□□ 0.61
CCNA1-203ENST00000625767 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.89■□□□□ 0.61
CCNA1-203ENST00000625767 ADD3Q9UEY8 706 aaKnown RBP18.89■□□□□ 0.61
CCNA1-203ENST00000625767 NOL7Q9UMY1 257 aaKnown RBP18.89■□□□□ 0.61
CCNA1-203ENST00000625767 IGLV3-22A0A075B6J6 115 aa18.88■□□□□ 0.61
CCNA1-203ENST00000625767 NCLP19338 710 aaKnown RBP18.88■□□□□ 0.61
CCNA1-203ENST00000625767 USP11P51784 963 aa18.88■□□□□ 0.61
CCNA1-203ENST00000625767 SOCS4Q8WXH5 440 aa18.88■□□□□ 0.61
CCNA1-203ENST00000625767 WDR11Q9BZH6 1224 aa18.88■□□□□ 0.61
CCNA1-203ENST00000625767 HOXC6P09630 235 aa18.87■□□□□ 0.61
CCNA1-203ENST00000625767 CCND2P30279 289 aa18.87■□□□□ 0.61
CCNA1-203ENST00000625767 ZNF76P36508 570 aa18.87■□□□□ 0.61
CCNA1-203ENST00000625767 TRAPPC10P48553 1259 aa18.87■□□□□ 0.61
CCNA1-203ENST00000625767 PRR16Q569H4 304 aa18.87■□□□□ 0.61
CCNA1-203ENST00000625767 ANO1Q5XXA6 986 aa18.87■□□□□ 0.61
CCNA1-203ENST00000625767 ARMCX2Q7L311 632 aa18.87■□□□□ 0.61
CCNA1-203ENST00000625767 DDX25Q9UHL0 483 aaKnown RBP18.87■□□□□ 0.61
CCNA1-203ENST00000625767 HSPA1AP0DMV8 641 aaKnown RBP18.86■□□□□ 0.61
CCNA1-203ENST00000625767 HSPA1BP0DMV9 641 aaKnown RBP18.86■□□□□ 0.61
CCNA1-203ENST00000625767 ARP10275 920 aa18.86■□□□□ 0.61
CCNA1-203ENST00000625767 CIITAP33076 1130 aa18.86■□□□□ 0.61
CCNA1-203ENST00000625767 RGS2P41220 211 aa18.86■□□□□ 0.61
CCNA1-203ENST00000625767 PTPAQ15257 358 aa18.86■□□□□ 0.61
CCNA1-203ENST00000625767 FBXO16Q8IX29 292 aaPredicted RBP18.86■□□□□ 0.61
CCNA1-203ENST00000625767 C4orf32Q8N8J7 132 aa18.86■□□□□ 0.61
CCNA1-203ENST00000625767 ERO1AQ96HE7 468 aa18.86■□□□□ 0.61
CCNA1-203ENST00000625767 IWS1Q96ST2 819 aa18.86■□□□□ 0.61
CCNA1-203ENST00000625767 APBA2Q99767 749 aa18.86■□□□□ 0.61
CCNA1-203ENST00000625767 SRRDQ9UH36 339 aa18.86■□□□□ 0.61
CCNA1-203ENST00000625767 UBIAD1Q9Y5Z9 338 aa18.86■□□□□ 0.61
CCNA1-203ENST00000625767 CYP3A7-CYP3A51PA0A087WV96 503 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 FIBPO43427 364 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 BAG4O95429 457 aaKnown RBP18.85■□□□□ 0.61
CCNA1-203ENST00000625767 SNAI1O95863 264 aaPredicted RBP18.85■□□□□ 0.61
CCNA1-203ENST00000625767 HSPA8P11142 646 aaKnown RBP18.85■□□□□ 0.61
CCNA1-203ENST00000625767 PTGS1P23219 599 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 CYP3A7P24462 503 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 CYP2C19P33261 490 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 PDE4DQ08499 809 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 SEMA3FQ13275 785 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 CEP55Q53EZ4 464 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 TMEM63BQ5T3F8 832 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 PPP4R3AQ6IN85 833 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 MORC4Q8TE76 937 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 MBOAT7Q96N66 472 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 MXRA8Q9BRK3 442 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 TINF2Q9BSI4 451 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 PKD2L1Q9P0L9 805 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 DIS3Q9Y2L1 958 aaKnown RBP18.85■□□□□ 0.61
CCNA1-203ENST00000625767 TRIM32Q13049 653 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 PTGDRQ13258 359 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 STXBP2Q15833 593 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 PRAMEF19Q5SWL8 479 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 TRIB2Q92519 343 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 ZNF396Q96N95 335 aaPredicted RBP18.85■□□□□ 0.61
CCNA1-203ENST00000625767 BCAS3Q9H6U6 928 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 PDGFCQ9NRA1 345 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 ATP6V1DQ9Y5K8 247 aa18.85■□□□□ 0.61
CCNA1-203ENST00000625767 MEIS1O00470 390 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 NEMFO60524 1076 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 ELNP15502 786 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 MARCKSP29966 332 aaPredicted RBP18.84■□□□□ 0.61
CCNA1-203ENST00000625767 NASPP49321 788 aaPredicted RBP18.84■□□□□ 0.61
CCNA1-203ENST00000625767 GRIN1Q05586 938 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 MAMDC4Q6UXC1 1216 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 SEPT14Q6ZU15 432 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 OTOP1Q7RTM1 612 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 ZNF467Q7Z7K2 595 aaPredicted RBP18.84■□□□□ 0.61
CCNA1-203ENST00000625767 PLA2G4DQ86XP0 818 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 LINC00301Q8NCQ3 95 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 HAS1Q92839 578 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 INPP4AQ96PE3 977 aaPredicted RBP18.84■□□□□ 0.61
CCNA1-203ENST00000625767 KATNBL1Q9H079 304 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 POLR3EQ9NVU0 708 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.84■□□□□ 0.61
CCNA1-203ENST00000625767 TRIM17Q9Y577 477 aa18.84■□□□□ 0.61
CCNA1-203ENST00000625767 MSH4O15457 936 aa18.83■□□□□ 0.61
CCNA1-203ENST00000625767 IGHA2P01877 340 aa18.83■□□□□ 0.61
CCNA1-203ENST00000625767 LBX1P52954 281 aa18.83■□□□□ 0.61
CCNA1-203ENST00000625767 KRT85P78386 507 aa18.83■□□□□ 0.61
CCNA1-203ENST00000625767 IL17AQ16552 155 aa18.83■□□□□ 0.61
CCNA1-203ENST00000625767 Q4G0T1 1027 aa18.83■□□□□ 0.61
CCNA1-203ENST00000625767 MOXD1Q6UVY6 613 aa18.83■□□□□ 0.61
CCNA1-203ENST00000625767 ETNPPLQ8TBG4 499 aa18.83■□□□□ 0.61
CCNA1-203ENST00000625767 JADE2Q9NQC1 790 aa18.83■□□□□ 0.61
CCNA1-203ENST00000625767 KCNH7Q9NS40 1196 aa18.83■□□□□ 0.61
CCNA1-203ENST00000625767 ASB14A6NK59 587 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 SORBS3O60504 671 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 ATP9AO75110 1047 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 EIF3JO75822 258 aaKnown RBP18.82■□□□□ 0.6
CCNA1-203ENST00000625767 ARIH2O95376 493 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 TPRNQ4KMQ1 711 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 LEO1Q8WVC0 666 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms