RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 ZNF333Q96JL9 665 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 MAP3K14Q99558 947 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 JMJD4Q9H9V9 463 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 PDRG1Q9NUG6 133 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 MAD2L2Q9UI95 211 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 CNPY2Q9Y2B0 182 aa8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 MRPL11Q9Y3B7 192 aaKnown RBP8.36□□□□□ -1.07
NPLOC4-221ENST00000625705 ZNF536O15090 1300 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 B4DLN1 442 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 NFIBO00712 420 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 CPLX1O14810 134 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 ZBTB5O15062 677 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 COBLO75128 1261 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 PLEKHA8P1O95397 391 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 HOXC6P09630 235 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 CYP2C19P33261 490 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 MRPL12P52815 198 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 USP46P62068 366 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 EXOSC10Q01780 885 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 COL9A3Q14050 684 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 MTFR1Q15390 333 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 C8orf34Q49A92 452 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 OLFML2BQ68BL8 750 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 RNF207Q6ZRF8 634 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 NOL8Q76FK4 1167 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 MCF2L2Q86YR7 1114 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 KRI1Q8N9T8 703 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 FANCBQ8NB91 859 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 KCNB2Q92953 911 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 MAML3Q96JK9 1138 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 PIGSQ96S52 555 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 USB1Q9BQ65 265 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 SPZ1Q9BXG8 430 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 TM6SF1Q9BZW5 370 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 UNC93B1Q9H1C4 597 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 A1CFQ9NQ94 594 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 ADD3Q9UEY8 706 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 PCDHA1Q9Y5I3 950 aa8.35□□□□□ -1.07
NPLOC4-221ENST00000625705 RPTORQ8N122 1335 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 DOCK3Q8IZD9 2030 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 PNMA6FA0A0J9YX94 578 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 ZBTB24O43167 697 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 HOXA2O43364 376 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 CFBP00751 764 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 TFRCP02786 760 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 MMP16P51512 607 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 GUCA2AQ02747 115 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 TRIM32Q13049 653 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 STK3Q13188 491 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 BAATQ14032 418 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 ANKRD1Q15327 319 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 CPLX2Q6PUV4 134 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 SLC30A10Q6XR72 485 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 HEATR3Q7Z4Q2 680 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 CMTR1Q8N1G2 835 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 USP6NLQ92738 828 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 CUL5Q93034 780 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 DEFB118Q96PH6 123 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 FAM217BQ9NTX9 383 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 CYP39A1Q9NYL5 469 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 ZHX1Q9UKY1 873 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 BRPF3Q9ULD4 1205 aa8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 DIS3Q9Y2L1 958 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 ZNFX1Q9P2E3 1918 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-221ENST00000625705 hCG_1642624A0A1W2PR95 340 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 ASB14A6NK59 587 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 ST8SIA5O15466 376 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 MSCO60682 206 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 CCND3P30281 292 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 NEK4P51957 841 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 RCAN1P53805 252 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 CCT2P78371 535 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 CNTN2Q02246 1040 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 CACNB2Q08289 660 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 PDE4DQ08499 809 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 PPP2R5BQ15173 497 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 ZNF792Q3KQV3 632 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 TMTC3Q6ZXV5 915 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 TRIM22Q8IYM9 498 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 SRBD1Q8N5C6 995 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 TINF2Q9BSI4 451 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 C22orf23Q9BZE7 217 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 RIOX1Q9H6W3 641 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 FLRT1Q9NZU1 646 aa8.33□□□□□ -1.08
NPLOC4-221ENST00000625705 DNAJC25-GNG10A0A024R161 153 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 GCOM1H8Y6P7 765 aaPredicted RBP8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 CYTH3O43739 400 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 GJB1P08034 283 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 POLR2MP0CAP2 368 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 SMARCA1P28370 1054 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 NAPAP54920 295 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 RPS6P62753 249 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 PRAMEF19Q5SWL8 479 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 ARHGEF16Q5VV41 709 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 ANO1Q5XXA6 986 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 ARMCX2Q7L311 632 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 EEPD1Q7L9B9 569 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 FCHSD1Q86WN1 690 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 CYP4X1Q8N118 509 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms