RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 PUS7LQ9H0K6 701 aaKnown RBP16.54■□□□□ 0.24
SNX1-214ENST00000625244 PAG1Q9NWQ8 432 aa16.54■□□□□ 0.24
SNX1-214ENST00000625244 COL4A6Q14031 1691 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 NCOR2Q9Y618 2525 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 MINDY4BA8MYZ0 360 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 LGR5O75473 907 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 ARIH2O95376 493 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 MCCP23508 829 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 TRIM71Q2Q1W2 868 aaKnown RBP16.53■□□□□ 0.24
SNX1-214ENST00000625244 ZNF618Q5T7W0 954 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 ERC1Q8IUD2 1116 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 FSD1Q9BTV5 496 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 CD207Q9UJ71 328 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 CCPG1Q9ULG6 757 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 TRPC6Q9Y210 931 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 CACNA1GO43497 2377 aa16.53■□□□□ 0.24
SNX1-214ENST00000625244 MICAL3Q7RTP6 2002 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 LOC102724159A0A0B4J2E5 919 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 PRR23AA6NEV1 266 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 LINC01565O15544 149 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 SLC1A4P43007 532 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 ID4P47928 161 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 PWP2Q15269 919 aaKnown RBP16.52■□□□□ 0.24
SNX1-214ENST00000625244 UBE3CQ15386 1083 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 KCTD1Q719H9 257 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 ZNF444Q8N0Y2 327 aaPredicted RBP16.52■□□□□ 0.24
SNX1-214ENST00000625244 DBF4BQ8NFT6 615 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 SCFD2Q8WU76 684 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 AFG1LQ8WV93 481 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 ASIC4Q96FT7 647 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 GMCL1Q96IK5 515 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 YME1L1Q96TA2 773 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 HDAC6Q9UBN7 1215 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 GTF2IRD1Q9UHL9 959 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 PRR12Q9ULL5 1215 aa16.52■□□□□ 0.24
SNX1-214ENST00000625244 LOC730098B7Z3J9 87 aa16.51■□□□□ 0.23
SNX1-214ENST00000625244 NFIBO00712 420 aa16.51■□□□□ 0.23
SNX1-214ENST00000625244 PLA2G6O60733 806 aa16.51■□□□□ 0.23
SNX1-214ENST00000625244 RGS20O76081 388 aa16.51■□□□□ 0.23
SNX1-214ENST00000625244 TXNP10599 105 aaKnown RBP16.51■□□□□ 0.23
SNX1-214ENST00000625244 PDE4BQ07343 736 aa16.51■□□□□ 0.23
SNX1-214ENST00000625244 SIGLEC14Q08ET2 396 aa16.51■□□□□ 0.23
SNX1-214ENST00000625244 RASGRP2Q7LDG7 609 aa16.51■□□□□ 0.23
SNX1-214ENST00000625244 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.51■□□□□ 0.232e-6■■■□□ 14.6
SNX1-214ENST00000625244 BOLA2Q9H3K6 86 aa16.51■□□□□ 0.23
SNX1-214ENST00000625244 IGFLR1Q9H665 355 aa16.51■□□□□ 0.23
SNX1-214ENST00000625244 GSG1L2A8MUP6 293 aa16.5■□□□□ 0.23
SNX1-214ENST00000625244 GRM6O15303 877 aa16.5■□□□□ 0.23
SNX1-214ENST00000625244 UPP2O95045 317 aa16.5■□□□□ 0.23
SNX1-214ENST00000625244 ICAM1P05362 532 aa16.5■□□□□ 0.23
SNX1-214ENST00000625244 MMP3P08254 477 aa16.5■□□□□ 0.23
SNX1-214ENST00000625244 PDE4DQ08499 809 aa16.5■□□□□ 0.23
SNX1-214ENST00000625244 SLC30A10Q6XR72 485 aa16.5■□□□□ 0.23
SNX1-214ENST00000625244 RHPN1Q8TCX5 695 aa16.5■□□□□ 0.23
SNX1-214ENST00000625244 TOP1MTQ969P6 601 aa16.5■□□□□ 0.23
SNX1-214ENST00000625244 STRBPQ96SI9 672 aaKnown RBP16.5■□□□□ 0.23
SNX1-214ENST00000625244 KMT2BQ9UMN6 2715 aaPredicted RBP16.5■□□□□ 0.23
SNX1-214ENST00000625244 ATG2AQ2TAZ0 1938 aa16.49■□□□□ 0.23
SNX1-214ENST00000625244 PTPDC1A2A3K4 754 aa16.49■□□□□ 0.23
SNX1-214ENST00000625244 EYA4O95677 639 aa16.49■□□□□ 0.23
SNX1-214ENST00000625244 EDNRBP24530 442 aa16.49■□□□□ 0.23
SNX1-214ENST00000625244 CALML3P27482 149 aa16.49■□□□□ 0.23
SNX1-214ENST00000625244 ZNF200P98182 395 aaPredicted RBP16.49■□□□□ 0.23
SNX1-214ENST00000625244 PTK7Q13308 1070 aa16.49■□□□□ 0.23
SNX1-214ENST00000625244 CBX2Q14781 532 aaPredicted RBP16.49■□□□□ 0.23
SNX1-214ENST00000625244 CEP85Q6P2H3 762 aa16.49■□□□□ 0.23
SNX1-214ENST00000625244 MSLNLQ96KJ4 702 aa16.49■□□□□ 0.23
SNX1-214ENST00000625244 TPRP12270 2363 aaKnown RBP16.49■□□□□ 0.23
SNX1-214ENST00000625244 CSPG5O95196 566 aa16.48■□□□□ 0.23
SNX1-214ENST00000625244 ADAM15Q13444 863 aa16.48■□□□□ 0.23
SNX1-214ENST00000625244 RCSD1Q6JBY9 416 aa16.48■□□□□ 0.23
SNX1-214ENST00000625244 CCDC62Q6P9F0 684 aa16.48■□□□□ 0.23
SNX1-214ENST00000625244 C7orf31Q8N865 590 aa16.48■□□□□ 0.23
SNX1-214ENST00000625244 NEDD1Q8NHV4 660 aa16.48■□□□□ 0.23
SNX1-214ENST00000625244 ALG1Q9BT22 464 aa16.48■□□□□ 0.23
SNX1-214ENST00000625244 BCL11AQ9H165 835 aa16.48■□□□□ 0.23
SNX1-214ENST00000625244 CFAP47Q6ZTR5 3102 aa16.48■□□□□ 0.23
SNX1-214ENST00000625244 EMSYQ7Z589 1322 aa16.47■□□□□ 0.23
SNX1-214ENST00000625244 EP300Q09472 2414 aaPredicted RBP16.47■□□□□ 0.23
SNX1-214ENST00000625244 GALR2O43603 387 aaPredicted RBP16.47■□□□□ 0.23
SNX1-214ENST00000625244 KRT37O76014 449 aa16.47■□□□□ 0.23
SNX1-214ENST00000625244 PDGFBP01127 241 aaPredicted RBP16.47■□□□□ 0.23
SNX1-214ENST00000625244 IFIT2P09913 472 aaKnown RBP16.47■□□□□ 0.23
SNX1-214ENST00000625244 CTNNB1P35222 781 aa16.47■□□□□ 0.23
SNX1-214ENST00000625244 NBL1P41271 181 aa16.47■□□□□ 0.23
SNX1-214ENST00000625244 ARHGAP1Q07960 439 aa16.47■□□□□ 0.23
SNX1-214ENST00000625244 PLEKHG4Q58EX7 1191 aa16.47■□□□□ 0.23
SNX1-214ENST00000625244 GIMAP6Q6P9H5 292 aa16.47■□□□□ 0.23
SNX1-214ENST00000625244 CLASRPQ8N2M8 674 aaKnown RBP16.47■□□□□ 0.23
SNX1-214ENST00000625244 CLEC4DQ8WXI8 215 aa16.47■□□□□ 0.23
SNX1-214ENST00000625244 LMAN2LQ9H0V9 348 aa16.47■□□□□ 0.23
SNX1-214ENST00000625244 CLEC1BQ9P126 229 aa16.47■□□□□ 0.23
SNX1-214ENST00000625244 PLIN4Q96Q06 1357 aa16.47■□□□□ 0.23
SNX1-214ENST00000625244 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.46■□□□□ 0.23
SNX1-214ENST00000625244 C5orf67F2Z3F1 127 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 KDM4AO75164 1064 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 LINC00271P0C7V0 271 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 TSPY3P0CV98 308 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 TSPY8P0CW00 308 aa16.46■□□□□ 0.23
SNX1-214ENST00000625244 CASTP20810 708 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms