RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 ORC2Q13416 577 aaPredicted RBP11.25□□□□□ -0.61
SRGAP2-217ENST00000624873 TXNRD3Q86VQ6 643 aa11.25□□□□□ -0.61
SRGAP2-217ENST00000624873 FAM49AQ9H0Q0 323 aaPredicted RBP11.25□□□□□ -0.61
SRGAP2-217ENST00000624873 BARHL2Q9NY43 387 aa11.25□□□□□ -0.61
SRGAP2-217ENST00000624873 BRPF3Q9ULD4 1205 aa11.25□□□□□ -0.61
SRGAP2-217ENST00000624873 RPN1P04843 607 aaKnown RBP11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 ZRSR2Q15696 482 aaKnown RBP11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 ASIC2Q16515 512 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 ZNF710Q8N1W2 664 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 NEK9Q8TD19 979 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 ACCSQ96QU6 501 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 NUCKS1Q9H1E3 243 aaKnown RBP11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 TMEM206Q9H813 350 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 SCAF8Q9UPN6 1271 aaKnown RBP11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 MARK3P27448 753 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 USP50Q70EL3 339 aaPredicted RBP11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 C7orf31Q8N865 590 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 MCPH1Q8NEM0 835 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 CCDC102AQ96A19 550 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 MMS19Q96T76 1030 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 C1orf112Q9NSG2 853 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 TMEM110-MUSTN1A8MSY1 372 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 CAP2P40123 477 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 NFX1Q12986 1120 aaKnown RBP11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 SLC9C1Q4G0N8 1177 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 DDX12PQ92771 950 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 CCDC127Q96BQ5 260 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 AIFM3Q96NN9 605 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 SLC39A2Q9NP94 309 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 HOXA7P31268 230 aaPredicted RBP11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 ADAM9Q13443 819 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 HLTFQ14527 1009 aaKnown RBP eCLIP11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 MAP1SQ66K74 1059 aaPredicted RBP11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 SESTD1Q86VW0 696 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 IPO4Q8TEX9 1081 aaKnown RBP11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 GSDMAQ96QA5 445 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 NUDT12Q9BQG2 462 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 PHLPP2Q6ZVD8 1323 aa11.24□□□□□ -0.61
SRGAP2-217ENST00000624873 ALDH1A1P00352 501 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 DLATP10515 647 aaKnown RBP11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 NBPF9Q3BBW0 867 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 TAX1BP1Q86VP1 789 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 CCDC50Q8IVM0 306 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 CACTINQ8WUQ7 758 aaKnown RBP11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 GJA10Q969M2 543 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 PDS5AQ29RF7 1337 aaKnown RBP11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 PABPN1LA6NDY0 278 aaKnown RBP11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 KRT9P35527 623 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 GCLCP48506 637 aaPredicted RBP11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 ALCAMQ13740 583 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 KIAA1841Q6NSI8 718 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 CRACR2AQ9BSW2 395 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 ZBED2Q9BTP6 218 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 PARVGQ9HBI0 331 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 TAB2Q9NYJ8 693 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 HESX1Q9UBX0 185 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 K7ERI5 159 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 MEIS1O00470 390 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 FANCCQ00597 558 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 CKAP4Q07065 602 aaKnown RBP11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 TOB2Q14106 344 aaPredicted RBP11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 CATSPER4Q7RTX7 472 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 PLCD3Q8N3E9 789 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 CHST13Q8NET6 341 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 COMMD10Q9Y6G5 202 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 GADD45BO75293 160 aaPredicted RBP11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 USP11P51784 963 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 PRELPP51888 382 aa11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 FKBP1AP62942 108 aaKnown RBP11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 MAK16Q9BXY0 300 aaKnown RBP11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 FTOQ9C0B1 505 aaKnown RBP eCLIP11.23□□□□□ -0.61
SRGAP2-217ENST00000624873 ERCC3P19447 782 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 CYP2B6P20813 491 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 FCGRTP55899 365 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 PPP2R3AQ06190 1150 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 TAF3Q5VWG9 929 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 DCUN1D2Q6PH85 259 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 C16orf45Q96MC5 204 aaPredicted RBP11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 SPATA33Q96N06 139 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 CCDC94Q9BW85 323 aaPredicted RBP11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 PRR12Q9ULL5 1215 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 SRPRBQ9Y5M8 271 aaKnown RBP11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 ZBTB24O43167 697 aaPredicted RBP11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 PLA2G4BP0C869 781 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 TXNP10599 105 aaKnown RBP11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 CASP7P55210 303 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 ZKSCAN4Q969J2 545 aaPredicted RBP11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 MIS12Q9H081 205 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 TMX1Q9H3N1 280 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 PFASO15067 1338 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 SALL1Q9NSC2 1324 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 SRGAP2CP0DJJ0 459 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 NFIAQ12857 509 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 BAATQ14032 418 aaPredicted RBP11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 TTBK2Q6IQ55 1244 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 GBP6Q6ZN66 633 aa11.22□□□□□ -0.61
SRGAP2-217ENST00000624873 LINC00301Q8NCQ3 95 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms