RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 SYN1P17600 705 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 ADCY7P51828 1080 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 ANKRD1Q15327 319 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 UBE2SQ16763 222 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 PFKFB3Q16875 520 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 TRIM60Q495X7 471 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 CCSAPQ6IQ19 270 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 CPLX2Q6PUV4 134 aaKnown RBP16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 VSIG10LQ86VR7 867 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 TRIM22Q8IYM9 498 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 IL31RAQ8NI17 732 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 COPS5Q92905 334 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 ZFP91Q96JP5 570 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 EHMT1Q9H9B1 1298 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 BARHL2Q9NY43 387 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 ALPK3Q96L96 1907 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 DNAH12Q6ZR08 3092 aa16.05■□□□□ 0.16
PCDHGC3-208ENST00000622836 SMCO2A6NFE2 343 aa16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 CTAGE5O15320 804 aa16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 PRPF3O43395 683 aaKnown RBP16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 PQBP1O60828 265 aaKnown RBP16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 GH1P01241 217 aa16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 MYL3P08590 195 aa16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 NEK4P51957 841 aa16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 NKX3-2P78367 333 aa16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 LY6KQ17RY6 165 aa16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 GNPTABQ3T906 1256 aa16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 KCNV1Q6PIU1 500 aa16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 CXCL17Q6UXB2 119 aa16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 CCDC12Q8WUD4 166 aaPredicted RBP16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 SLKQ9H2G2 1235 aaPredicted RBP16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 PRDM5Q9NQX1 630 aaPredicted RBP16.04■□□□□ 0.16
PCDHGC3-208ENST00000622836 ELP1O95163 1332 aa16.03■□□□□ 0.16
PCDHGC3-208ENST00000622836 A0A0U1RQG5 324 aaPredicted RBP16.03■□□□□ 0.16
PCDHGC3-208ENST00000622836 CABYRO75952 493 aa16.03■□□□□ 0.16
PCDHGC3-208ENST00000622836 IFNAR1P17181 557 aa16.03■□□□□ 0.16
PCDHGC3-208ENST00000622836 AK2P54819 239 aa16.03■□□□□ 0.16
PCDHGC3-208ENST00000622836 SSRP1Q08945 709 aaKnown RBP16.03■□□□□ 0.16
PCDHGC3-208ENST00000622836 CCDC62Q6P9F0 684 aa16.03■□□□□ 0.16
PCDHGC3-208ENST00000622836 RNF26Q9BY78 433 aaPredicted RBP16.03■□□□□ 0.16
PCDHGC3-208ENST00000622836 GLT8D2Q9H1C3 349 aa16.03■□□□□ 0.16
PCDHGC3-208ENST00000622836 RIC8AQ9NPQ8 531 aa16.03■□□□□ 0.16
PCDHGC3-208ENST00000622836 POLR3EQ9NVU0 708 aa16.03■□□□□ 0.16
PCDHGC3-208ENST00000622836 RTEL1Q9NZ71 1219 aa16.03■□□□□ 0.16
PCDHGC3-208ENST00000622836 FRMPD4Q14CM0 1322 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 SORBS3O60504 671 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 STAM2O75886 525 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 TLE2Q04725 743 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 SNX17Q15036 470 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 NTRK3Q16288 839 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 C1orf53Q5VUE5 145 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 PCNX4Q63HM2 1172 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 TYW1BQ6NUM6 668 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 XRRA1Q6P2D8 792 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 CHRDL2Q6WN34 429 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 DHX37Q8IY37 1157 aaKnown RBP16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 ALDH8A1Q9H2A2 487 aaPredicted RBP16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 UPF2Q9HAU5 1272 aaKnown RBP16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 DDX41Q9UJV9 622 aaKnown RBP16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 PCDHA6Q9UN73 950 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 PCDHA8Q9Y5H6 950 aa16.02■□□□□ 0.16
PCDHGC3-208ENST00000622836 KIAA1217Q5T5P2 1943 aa16.02■□□□□ 0.15
PCDHGC3-208ENST00000622836 CDKL5O76039 1030 aa16.01■□□□□ 0.15
PCDHGC3-208ENST00000622836 RGS20O76081 388 aa16.01■□□□□ 0.15
PCDHGC3-208ENST00000622836 PKN1Q16512 942 aa16.01■□□□□ 0.15
PCDHGC3-208ENST00000622836 NLRX1Q86UT6 975 aa16.01■□□□□ 0.15
PCDHGC3-208ENST00000622836 CCDC148Q8NFR7 591 aa16.01■□□□□ 0.15
PCDHGC3-208ENST00000622836 AFG1LQ8WV93 481 aa16.01■□□□□ 0.15
PCDHGC3-208ENST00000622836 C6orf50Q9HD87 102 aa16.01■□□□□ 0.15
PCDHGC3-208ENST00000622836 TPCN1Q9ULQ1 816 aa16.01■□□□□ 0.15
PCDHGC3-208ENST00000622836 MROH7Q68CQ1 1323 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 DCDC2CA8MYV0 355 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 ARVCFO00192 962 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 KPNA6O60684 536 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 FOSP01100 380 aaPredicted RBP16■□□□□ 0.15
PCDHGC3-208ENST00000622836 CLTBP09497 229 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 TGFB3P10600 412 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 CHMP4BP1P59074 171 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 MRPS9P82933 396 aaKnown RBP16■□□□□ 0.15
PCDHGC3-208ENST00000622836 ARHGAP1Q07960 439 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 ITGA7Q13683 1181 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 LAMC2Q13753 1193 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 TEX2Q8IWB9 1127 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 IL17RAQ96F46 866 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 PGBD1Q96JS3 809 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 LBHD1Q9BQE6 289 aaPredicted RBP16■□□□□ 0.15
PCDHGC3-208ENST00000622836 MTG1Q9BT17 334 aaPredicted RBP16■□□□□ 0.15
PCDHGC3-208ENST00000622836 ANO3Q9BYT9 981 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 C22orf23Q9BZE7 217 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 MLXIPQ9HAP2 919 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 GTF3C3Q9Y5Q9 886 aa16■□□□□ 0.15
PCDHGC3-208ENST00000622836 A6NJR5 290 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 TLR3O15455 904 aaKnown RBP15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 FIBPO43427 364 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 DEXIO95424 95 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 GGPS1O95749 300 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 MMP3P08254 477 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 UBA1P22314 1058 aaKnown RBP15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 GNA11P29992 359 aa15.99■□□□□ 0.15
PCDHGC3-208ENST00000622836 PSMC6P62333 389 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms