RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 ANKRD33Q7Z3H0 272 aa14.19□□□□□ -0.14
CBWD3-218ENST00000622755 TEX2Q8IWB9 1127 aa14.19□□□□□ -0.14
CBWD3-218ENST00000622755 BRF1Q92994 677 aa14.19□□□□□ -0.14
CBWD3-218ENST00000622755 GDF15Q99988 308 aa14.19□□□□□ -0.14
CBWD3-218ENST00000622755 MTG1Q9BT17 334 aaPredicted RBP14.19□□□□□ -0.14
CBWD3-218ENST00000622755 PSTPIP2Q9H939 334 aa14.19□□□□□ -0.14
CBWD3-218ENST00000622755 COL20A1Q9P218 1284 aa14.19□□□□□ -0.14
CBWD3-218ENST00000622755 TGFB3P10600 412 aa14.18□□□□□ -0.14
CBWD3-218ENST00000622755 NAPAP54920 295 aa14.18□□□□□ -0.14
CBWD3-218ENST00000622755 ITGA7Q13683 1181 aa14.18□□□□□ -0.14
CBWD3-218ENST00000622755 LAMC2Q13753 1193 aa14.18□□□□□ -0.14
CBWD3-218ENST00000622755 XRRA1Q6P2D8 792 aa14.18□□□□□ -0.14
CBWD3-218ENST00000622755 CPLX2Q6PUV4 134 aaKnown RBP14.18□□□□□ -0.14
CBWD3-218ENST00000622755 DHX37Q8IY37 1157 aaKnown RBP14.18□□□□□ -0.14
CBWD3-218ENST00000622755 TDHQ8IZJ6 230 aa14.18□□□□□ -0.14
CBWD3-218ENST00000622755 CMTR1Q8N1G2 835 aaKnown RBP14.18□□□□□ -0.14
CBWD3-218ENST00000622755 CCDC12Q8WUD4 166 aaPredicted RBP14.18□□□□□ -0.14
CBWD3-218ENST00000622755 PDLIM7Q9NR12 457 aa14.18□□□□□ -0.14
CBWD3-218ENST00000622755 PIK3CDO00329 1044 aa14.17□□□□□ -0.14
CBWD3-218ENST00000622755 OPLAHO14841 1288 aa14.17□□□□□ -0.14
CBWD3-218ENST00000622755 SUPT20HL2P0C7V6 817 aa14.17□□□□□ -0.14
CBWD3-218ENST00000622755 FAM47CQ5HY64 1035 aa14.17□□□□□ -0.14
CBWD3-218ENST00000622755 PPP1R18Q6NYC8 613 aa14.17□□□□□ -0.14
CBWD3-218ENST00000622755 RUFY3Q7L099 469 aa14.17□□□□□ -0.14
CBWD3-218ENST00000622755 NLRX1Q86UT6 975 aa14.17□□□□□ -0.14
CBWD3-218ENST00000622755 KATNAL1Q9BW62 490 aa14.17□□□□□ -0.14
CBWD3-218ENST00000622755 NOD1Q9Y239 953 aa14.17□□□□□ -0.14
CBWD3-218ENST00000622755 APOBRQ0VD83 1088 aa14.16□□□□□ -0.14
CBWD3-218ENST00000622755 DGKDQ16760 1214 aa14.16□□□□□ -0.14
CBWD3-218ENST00000622755 LY6KQ17RY6 165 aa14.16□□□□□ -0.14
CBWD3-218ENST00000622755 VSIG10LQ86VR7 867 aa14.16□□□□□ -0.14
CBWD3-218ENST00000622755 CDHR1Q96JP9 859 aa14.16□□□□□ -0.14
CBWD3-218ENST00000622755 USP26Q9BXU7 913 aa14.16□□□□□ -0.14
CBWD3-218ENST00000622755 TM6SF1Q9BZW5 370 aa14.16□□□□□ -0.14
CBWD3-218ENST00000622755 MLXIPQ9HAP2 919 aa14.16□□□□□ -0.14
CBWD3-218ENST00000622755 BRPF3Q9ULD4 1205 aa14.16□□□□□ -0.14
CBWD3-218ENST00000622755 A6NJR5 290 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 NOP56O00567 594 aaKnown RBP14.15□□□□□ -0.14
CBWD3-218ENST00000622755 CPLX1O14810 134 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 KIAA0355O15063 1070 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 CTAGE5O15320 804 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 CPA1P15085 419 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 CDK7P50613 346 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 ADCY7P51828 1080 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 CHMP4BP1P59074 171 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 IRX5P78411 483 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-218ENST00000622755 PURAQ00577 322 aaKnown RBP14.15□□□□□ -0.14
CBWD3-218ENST00000622755 FAAP100Q0VG06 881 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 NEDD9Q14511 834 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 SLC35G1Q2M3R5 365 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 MCTP2Q6DN12 878 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 CCDC62Q6P9F0 684 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 TRIM22Q8IYM9 498 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 FBXL16Q8N461 479 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 TMEM199Q8N511 208 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 GIMAP8Q8ND71 665 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-218ENST00000622755 BADQ92934 168 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 V9GY48 417 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-218ENST00000622755 CNTNAP5Q8WYK1 1306 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 hCG_1642624A0A1W2PR95 340 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 FIBPO43427 364 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 FOSP01100 380 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-218ENST00000622755 FPGSQ05932 587 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 PTPN11Q06124 597 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-218ENST00000622755 PCNX4Q63HM2 1172 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 USP17L6PQ6QN14 398 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 FAM126BQ8IXS8 530 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 AFG1LQ8WV93 481 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 COPS5Q92905 334 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 GPKOWQ92917 476 aaPredicted RBP eCLIP14.15□□□□□ -0.14
CBWD3-218ENST00000622755 EMID1Q96A84 441 aaPredicted RBP14.15□□□□□ -0.14
CBWD3-218ENST00000622755 PRO3102Q9H379 93 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 ZSWIM6Q9HCJ5 1215 aa14.15□□□□□ -0.14
CBWD3-218ENST00000622755 DDX41Q9UJV9 622 aaKnown RBP14.15□□□□□ -0.14
CBWD3-218ENST00000622755 LTBP2Q14767 1821 aa14.14□□□□□ -0.15
CBWD3-218ENST00000622755 ARIH2O95376 493 aa14.14□□□□□ -0.15
CBWD3-218ENST00000622755 TIMP1P01033 207 aa14.14□□□□□ -0.15
CBWD3-218ENST00000622755 MMP3P08254 477 aa14.14□□□□□ -0.15
CBWD3-218ENST00000622755 ANAPC15P60006 121 aa14.14□□□□□ -0.15
CBWD3-218ENST00000622755 PPIGQ13427 754 aaKnown RBP eCLIP14.14□□□□□ -0.15
CBWD3-218ENST00000622755 ANKRD1Q15327 319 aa14.14□□□□□ -0.15
CBWD3-218ENST00000622755 NFRKBQ6P4R8 1299 aa14.14□□□□□ -0.15
CBWD3-218ENST00000622755 CCDC155Q8N6L0 562 aa14.14□□□□□ -0.15
CBWD3-218ENST00000622755 CCDC148Q8NFR7 591 aa14.14□□□□□ -0.15
CBWD3-218ENST00000622755 PPTC7Q8NI37 304 aa14.14□□□□□ -0.15
CBWD3-218ENST00000622755 SPATA33Q96N06 139 aa14.14□□□□□ -0.15
CBWD3-218ENST00000622755 MTIF3Q9H2K0 278 aaKnown RBP14.14□□□□□ -0.15
CBWD3-218ENST00000622755 PDRG1Q9NUG6 133 aa14.14□□□□□ -0.15
CBWD3-218ENST00000622755 MYH7BA7E2Y1 1941 aa14.13□□□□□ -0.15
CBWD3-218ENST00000622755 FRMPD4Q14CM0 1322 aa14.13□□□□□ -0.15
CBWD3-218ENST00000622755 TRIM43BA6NCK2 446 aa14.13□□□□□ -0.15
CBWD3-218ENST00000622755 SMCO2A6NFE2 343 aa14.13□□□□□ -0.15
CBWD3-218ENST00000622755 MEIS2O14770 477 aa14.13□□□□□ -0.15
CBWD3-218ENST00000622755 GGPS1O95749 300 aa14.13□□□□□ -0.15
CBWD3-218ENST00000622755 SCG2P13521 617 aa14.13□□□□□ -0.15
CBWD3-218ENST00000622755 GNA11P29992 359 aa14.13□□□□□ -0.15
CBWD3-218ENST00000622755 FXR1P51114 621 aaKnown RBP eCLIP14.13□□□□□ -0.15
CBWD3-218ENST00000622755 PSMC6P62333 389 aa14.13□□□□□ -0.15
CBWD3-218ENST00000622755 ARHGAP1Q07960 439 aa14.13□□□□□ -0.15
CBWD3-218ENST00000622755 AP3B2Q13367 1082 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms