RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CPS1P31327 1500 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 POTEMA6NI47 508 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 SFI1A8K8P3 1242 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 CASP8Q14790 479 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 STMN2Q93045 179 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 PTPRMP28827 1452 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 PPFIA4O75335 1185 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 FAM186BQ8IYM0 893 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 SUPT20HQ8NEM7 779 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 ISCA1Q9BUE6 129 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 BRIP1Q9BX63 1249 aa17.66■□□□□ 0.42
GABRB3-215ENST00000622697 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.65■□□□□ 0.42
GABRB3-215ENST00000622697 PLA2G4BP0C869 781 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 HSPA1LP34931 641 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 CACNB3P54284 484 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 ADCY1Q08828 1119 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 TSGA10IPQ3SY00 556 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 ZNF577Q9BSK1 485 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 ADGRL3Q9HAR2 1447 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 RIC8AQ9NPQ8 531 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 PALLDQ8WX93 1383 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 BSPRYQ5W0U4 402 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 CASC4Q6P4E1 433 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 SMIM5Q71RC9 77 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 PHLDB2Q86SQ0 1253 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 CACNA2D3Q8IZS8 1091 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 PPRC1Q5VV67 1664 aaKnown RBP17.65■□□□□ 0.42
GABRB3-215ENST00000622697 ZNF335Q9H4Z2 1342 aaPredicted RBP17.65■□□□□ 0.42
GABRB3-215ENST00000622697 USP17L5A8MUK1 530 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 CA8P35219 290 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 PSMC4P43686 418 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 IFNAR2P48551 515 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 OSBPL5Q9H0X9 879 aaPredicted RBP17.65■□□□□ 0.42
GABRB3-215ENST00000622697 C1orf112Q9NSG2 853 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 ABHD10Q9NUJ1 306 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 STK17AQ9UEE5 414 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 PARP2Q9UGN5 583 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 ADAMTS1Q9UHI8 967 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 PRPF6O94906 941 aaKnown RBP17.65■□□□□ 0.42
GABRB3-215ENST00000622697 METTL13Q8N6R0 699 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 ALDH8A1Q9H2A2 487 aaPredicted RBP17.65■□□□□ 0.42
GABRB3-215ENST00000622697 ANKFY1Q9P2R3 1169 aa17.65■□□□□ 0.42
GABRB3-215ENST00000622697 DAPK3O43293 454 aa17.64■□□□□ 0.42
GABRB3-215ENST00000622697 ARL6IP4Q66PJ3 421 aaKnown RBP17.64■□□□□ 0.42
GABRB3-215ENST00000622697 POMGNT1Q8WZA1 660 aa17.64■□□□□ 0.42
GABRB3-215ENST00000622697 SUGCTQ9HAC7 445 aa17.64■□□□□ 0.42
GABRB3-215ENST00000622697 ATP8B1O43520 1251 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 AP1M1Q9BXS5 423 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 GCNT4Q9P109 453 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 MTF1Q14872 753 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 PFKFB3Q16875 520 aaPredicted RBP17.64■□□□□ 0.41
GABRB3-215ENST00000622697 PAGR1Q9BTK6 254 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 RNF34Q969K3 372 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 MAGOHBQ96A72 148 aaKnown RBP17.64■□□□□ 0.41
GABRB3-215ENST00000622697 IWS1Q96ST2 819 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 TMEM47Q9BQJ4 181 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 TACO1Q9BSH4 297 aaKnown RBP17.64■□□□□ 0.41
GABRB3-215ENST00000622697 USP31Q70CQ4 1352 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 FAM205CA6NFA0 338 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 TRIM37O94972 964 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 FOSP01100 380 aaPredicted RBP17.64■□□□□ 0.41
GABRB3-215ENST00000622697 CYP19A1P11511 503 aaPredicted RBP17.64■□□□□ 0.41
GABRB3-215ENST00000622697 PCK1P35558 622 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 PSMC2P35998 433 aaKnown RBP17.64■□□□□ 0.41
GABRB3-215ENST00000622697 CTAGE3PQ8IX95 158 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 BPIFA3Q9BQP9 254 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 ATP8A1Q9Y2Q0 1164 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 JRKLQ9Y4A0 524 aa17.64■□□□□ 0.41
GABRB3-215ENST00000622697 USP42Q9H9J4 1324 aaKnown RBP17.63■□□□□ 0.41
GABRB3-215ENST00000622697 STK36Q9NRP7 1315 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 SNX1Q13596 522 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
GABRB3-215ENST00000622697 CROCCP2Q86T23 111 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 CCDC17Q96LX7 622 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 DCP1AQ9NPI6 582 aaPredicted RBP17.63■□□□□ 0.41
GABRB3-215ENST00000622697 THAP12O43422 761 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 GKAP1Q5VSY0 366 aaPredicted RBP17.63■□□□□ 0.41
GABRB3-215ENST00000622697 GSPT2Q8IYD1 628 aaKnown RBP17.63■□□□□ 0.41
GABRB3-215ENST00000622697 CCDC13Q8IYE1 715 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 CCDC170Q8IYT3 715 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 TRIM6Q9C030 488 aaPredicted RBP17.63■□□□□ 0.41
GABRB3-215ENST00000622697 TMEM260Q9NX78 707 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 LRRIQ4A6NIV6 560 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 EPHB4P54760 987 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 ITIH3Q06033 890 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 CEP128Q6ZU80 1094 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 METTL16Q86W50 562 aaKnown RBP17.63■□□□□ 0.41
GABRB3-215ENST00000622697 CPDO75976 1380 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 ANKRD65E5RJM6 399 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 DMP1Q13316 513 aaPredicted RBP17.63■□□□□ 0.41
GABRB3-215ENST00000622697 DGKHQ86XP1 1220 aa17.63■□□□□ 0.41
GABRB3-215ENST00000622697 ZNF579Q8NAF0 562 aaKnown RBP17.63■□□□□ 0.41
GABRB3-215ENST00000622697 ZCCHC17Q9NP64 241 aaKnown RBP17.63■□□□□ 0.41
GABRB3-215ENST00000622697 MYL1P05976 194 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 PLTPP55058 493 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 CTTNQ14247 550 aaKnown RBP17.62■□□□□ 0.41
GABRB3-215ENST00000622697 CDAN1Q8IWY9 1227 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 MCTP2Q6DN12 878 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 SCYL2Q6P3W7 929 aa17.62■□□□□ 0.41
GABRB3-215ENST00000622697 MCUR1Q96AQ8 359 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms