RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 MMP3P08254 477 aa22.35■■□□□ 1.17
LTBP4-239ENST00000622565 CYP2C9P11712 490 aa22.35■■□□□ 1.17
LTBP4-239ENST00000622565 CCL23P55773 120 aa22.35■■□□□ 1.17
LTBP4-239ENST00000622565 SMAD3P84022 425 aaKnown RBP22.35■■□□□ 1.17
LTBP4-239ENST00000622565 ADCK5Q3MIX3 580 aa22.35■■□□□ 1.17
LTBP4-239ENST00000622565 NFXL1Q6ZNB6 911 aa22.35■■□□□ 1.17
LTBP4-239ENST00000622565 FCHSD1Q86WN1 690 aa22.35■■□□□ 1.17
LTBP4-239ENST00000622565 SAMD3Q8N6K7 520 aa22.35■■□□□ 1.17
LTBP4-239ENST00000622565 GPKOWQ92917 476 aaPredicted RBP eCLIP22.35■■□□□ 1.17
LTBP4-239ENST00000622565 RASIP1Q5U651 963 aa22.34■■□□□ 1.17
LTBP4-239ENST00000622565 ZNF365Q70YC5 407 aa22.34■■□□□ 1.17
LTBP4-239ENST00000622565 KAT2BQ92831 832 aa22.34■■□□□ 1.17
LTBP4-239ENST00000622565 CCDC136Q96JN2 1154 aa22.34■■□□□ 1.17
LTBP4-239ENST00000622565 TCEANC2Q96MN5 208 aa22.34■■□□□ 1.17
LTBP4-239ENST00000622565 TTYH1Q9H313 450 aaPredicted RBP22.34■■□□□ 1.17
LTBP4-239ENST00000622565 MRVI1Q9Y6F6 885 aa22.34■■□□□ 1.17
LTBP4-239ENST00000622565 KIAA1217Q5T5P2 1943 aa22.33■■□□□ 1.17
LTBP4-239ENST00000622565 SORBS3O60504 671 aa22.33■■□□□ 1.17
LTBP4-239ENST00000622565 KPNA6O60684 536 aa22.33■■□□□ 1.17
LTBP4-239ENST00000622565 SMARCA1P28370 1054 aa22.33■■□□□ 1.17
LTBP4-239ENST00000622565 KIF5BP33176 963 aa22.33■■□□□ 1.17
LTBP4-239ENST00000622565 SP2Q02086 613 aa22.33■■□□□ 1.17
LTBP4-239ENST00000622565 BRDTQ58F21 947 aaPredicted RBP22.33■■□□□ 1.17
LTBP4-239ENST00000622565 FAM47CQ5HY64 1035 aa22.33■■□□□ 1.17
LTBP4-239ENST00000622565 TMTC2Q8N394 836 aa22.33■■□□□ 1.17
LTBP4-239ENST00000622565 SCLYQ96I15 445 aa22.33■■□□□ 1.17
LTBP4-239ENST00000622565 IL23AQ9NPF7 189 aa22.33■■□□□ 1.17
LTBP4-239ENST00000622565 SCN10AQ9Y5Y9 1956 aa22.32■■□□□ 1.16
LTBP4-239ENST00000622565 hCG_1642624A0A1W2PR95 340 aa22.32■■□□□ 1.16
LTBP4-239ENST00000622565 EXOSC10Q01780 885 aaKnown RBP22.32■■□□□ 1.16
LTBP4-239ENST00000622565 TRAF1Q13077 416 aa22.32■■□□□ 1.16
LTBP4-239ENST00000622565 SGMS1Q86VZ5 419 aa22.32■■□□□ 1.16
LTBP4-239ENST00000622565 EMID1Q96A84 441 aaPredicted RBP22.32■■□□□ 1.16
LTBP4-239ENST00000622565 RRP36Q96EU6 259 aaKnown RBP22.32■■□□□ 1.16
LTBP4-239ENST00000622565 NEK1Q96PY6 1258 aa22.32■■□□□ 1.16
LTBP4-239ENST00000622565 BCAS3Q9H6U6 928 aa22.32■■□□□ 1.16
LTBP4-239ENST00000622565 STXBP5LQ9Y2K9 1186 aa22.32■■□□□ 1.16
LTBP4-239ENST00000622565 COL6A3P12111 3177 aa22.32■■□□□ 1.16
LTBP4-239ENST00000622565 FRMPD4Q14CM0 1322 aa22.31■■□□□ 1.16
LTBP4-239ENST00000622565 BAZ2BQ9UIF8 2168 aaKnown RBP22.31■■□□□ 1.16
LTBP4-239ENST00000622565 GRXCR1A8MXD5 290 aa22.31■■□□□ 1.16
LTBP4-239ENST00000622565 CHMP4BP1P59074 171 aa22.31■■□□□ 1.16
LTBP4-239ENST00000622565 MRPS9P82933 396 aaKnown RBP22.31■■□□□ 1.16
LTBP4-239ENST00000622565 ZNF697Q5TEC3 545 aa22.31■■□□□ 1.16
LTBP4-239ENST00000622565 NFRKBQ6P4R8 1299 aa22.31■■□□□ 1.16
LTBP4-239ENST00000622565 USP17L6PQ6QN14 398 aa22.31■■□□□ 1.16
LTBP4-239ENST00000622565 CTAGE1Q96RT6 745 aa22.31■■□□□ 1.16
LTBP4-239ENST00000622565 LZTS2Q9BRK4 669 aa22.31■■□□□ 1.16
LTBP4-239ENST00000622565 SEMA6BQ9H3T3 888 aa22.31■■□□□ 1.16
LTBP4-239ENST00000622565 CXXC1Q9P0U4 656 aaPredicted RBP22.31■■□□□ 1.16
LTBP4-239ENST00000622565 SLC12A7Q9Y666 1083 aa22.31■■□□□ 1.16
LTBP4-239ENST00000622565 RBAK-RBAKDNI3L0D1 243 aa22.3■■□□□ 1.16
LTBP4-239ENST00000622565 MEIS2O14770 477 aa22.3■■□□□ 1.16
LTBP4-239ENST00000622565 CCND2P30279 289 aa22.3■■□□□ 1.16
LTBP4-239ENST00000622565 TSGA10IPQ3SY00 556 aa22.3■■□□□ 1.16
LTBP4-239ENST00000622565 RNF20Q5VTR2 975 aa22.3■■□□□ 1.16
LTBP4-239ENST00000622565 TMTC3Q6ZXV5 915 aa22.3■■□□□ 1.16
LTBP4-239ENST00000622565 MICU3Q86XE3 530 aa22.3■■□□□ 1.16
LTBP4-239ENST00000622565 DHX37Q8IY37 1157 aaKnown RBP22.3■■□□□ 1.16
LTBP4-239ENST00000622565 CCDC82Q8N4S0 544 aa22.3■■□□□ 1.16
LTBP4-239ENST00000622565 FANCBQ8NB91 859 aa22.3■■□□□ 1.16
LTBP4-239ENST00000622565 BRPF3Q9ULD4 1205 aa22.3■■□□□ 1.16
LTBP4-239ENST00000622565 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.29■■□□□ 1.16
LTBP4-239ENST00000622565 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.29■■□□□ 1.16
LTBP4-239ENST00000622565 SUPT20HL2P0C7V6 817 aa22.29■■□□□ 1.16
LTBP4-239ENST00000622565 CALM1P0DP23 149 aa22.29■■□□□ 1.16
LTBP4-239ENST00000622565 CALM2P0DP24 149 aa22.29■■□□□ 1.16
LTBP4-239ENST00000622565 CALM3P0DP25 149 aa22.29■■□□□ 1.16
LTBP4-239ENST00000622565 UBA1P22314 1058 aaKnown RBP22.29■■□□□ 1.16
LTBP4-239ENST00000622565 GNAQP50148 359 aa22.29■■□□□ 1.16
LTBP4-239ENST00000622565 LAMC2Q13753 1193 aa22.29■■□□□ 1.16
LTBP4-239ENST00000622565 HSDL1Q3SXM5 330 aa22.29■■□□□ 1.16
LTBP4-239ENST00000622565 MYSM1Q5VVJ2 828 aa22.29■■□□□ 1.16
LTBP4-239ENST00000622565 PSRC1Q6PGN9 363 aaPredicted RBP22.29■■□□□ 1.16
LTBP4-239ENST00000622565 GGPS1O95749 300 aa22.28■■□□□ 1.16
LTBP4-239ENST00000622565 ZNF286BP0CG31 522 aa22.28■■□□□ 1.16
LTBP4-239ENST00000622565 CPA1P15085 419 aa22.28■■□□□ 1.16
LTBP4-239ENST00000622565 CASTP20810 708 aaKnown RBP22.28■■□□□ 1.16
LTBP4-239ENST00000622565 PBX2P40425 430 aa22.28■■□□□ 1.16
LTBP4-239ENST00000622565 PTPN11Q06124 597 aaPredicted RBP22.28■■□□□ 1.16
LTBP4-239ENST00000622565 SEMA3FQ13275 785 aa22.28■■□□□ 1.16
LTBP4-239ENST00000622565 DGKDQ16760 1214 aa22.28■■□□□ 1.16
LTBP4-239ENST00000622565 CELF3Q5SZQ8 465 aaKnown RBP22.28■■□□□ 1.16
LTBP4-239ENST00000622565 GDF6Q6KF10 455 aaPredicted RBP22.28■■□□□ 1.16
LTBP4-239ENST00000622565 APOA5Q6Q788 366 aa22.28■■□□□ 1.16
LTBP4-239ENST00000622565 DHX32Q7L7V1 743 aaKnown RBP22.28■■□□□ 1.16
LTBP4-239ENST00000622565 PPTC7Q8NI37 304 aa22.28■■□□□ 1.16
LTBP4-239ENST00000622565 HERVK_113Q902F9 699 aa22.28■■□□□ 1.16
LTBP4-239ENST00000622565 SEC63Q9UGP8 760 aaKnown RBP22.28■■□□□ 1.16
LTBP4-239ENST00000622565 FGBP02675 491 aa22.27■■□□□ 1.16
LTBP4-239ENST00000622565 HOXD8P13378 290 aaPredicted RBP22.27■■□□□ 1.16
LTBP4-239ENST00000622565 OTOP2Q7RTS6 562 aa22.27■■□□□ 1.16
LTBP4-239ENST00000622565 KCNB2Q92953 911 aa22.27■■□□□ 1.16
LTBP4-239ENST00000622565 CDX2Q99626 313 aaPredicted RBP22.27■■□□□ 1.16
LTBP4-239ENST00000622565 RTEL1Q9NZ71 1219 aa22.27■■□□□ 1.16
LTBP4-239ENST00000622565 TELO2Q9Y4R8 837 aa22.27■■□□□ 1.16
LTBP4-239ENST00000622565 HAS3O00219 553 aa22.26■■□□□ 1.15
LTBP4-239ENST00000622565 PIK3CDO00329 1044 aa22.26■■□□□ 1.15
LTBP4-239ENST00000622565 F2P00734 622 aa22.26■■□□□ 1.15
LTBP4-239ENST00000622565 DNAJB2P25686 324 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms