RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SPATS2Q86XZ4 545 aaKnown RBP6.74□□□□□ -1.33
CPNE3-213ENST00000622183 BCL7CQ8WUZ0 217 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-213ENST00000622183 TMEM169Q96HH4 297 aa6.74□□□□□ -1.33
CPNE3-213ENST00000622183 CHAMP1Q96JM3 812 aa6.74□□□□□ -1.33
CPNE3-213ENST00000622183 CARS2Q9HA77 564 aaKnown RBP6.74□□□□□ -1.33
CPNE3-213ENST00000622183 SLC5A4Q9NY91 659 aa6.74□□□□□ -1.33
CPNE3-213ENST00000622183 B4GALT6Q9UBX8 382 aa6.74□□□□□ -1.33
CPNE3-213ENST00000622183 ADGRE2Q9UHX3 823 aa6.74□□□□□ -1.33
CPNE3-213ENST00000622183 APOBEC2Q9Y235 224 aaKnown RBP6.74□□□□□ -1.33
CPNE3-213ENST00000622183 WASHC2CQ9Y4E1 1318 aa6.74□□□□□ -1.33
CPNE3-213ENST00000622183 A0A1W2PQ45 241 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-213ENST00000622183 A0A1W2PQY0 241 aa6.73□□□□□ -1.33
CPNE3-213ENST00000622183 GAS7O60861 476 aa6.73□□□□□ -1.33
CPNE3-213ENST00000622183 PARNO95453 639 aaKnown RBP6.73□□□□□ -1.33
CPNE3-213ENST00000622183 PYGMP11217 842 aa6.73□□□□□ -1.33
CPNE3-213ENST00000622183 CD96P40200 585 aa6.73□□□□□ -1.33
CPNE3-213ENST00000622183 KIR2DL1P43626 348 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-213ENST00000622183 KIR2DL2P43627 348 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-213ENST00000622183 CORO7P57737 925 aa6.73□□□□□ -1.33
CPNE3-213ENST00000622183 SART3Q15020 963 aaKnown RBP6.73□□□□□ -1.33
CPNE3-213ENST00000622183 ANGEL2Q5VTE6 544 aaKnown RBP6.73□□□□□ -1.33
CPNE3-213ENST00000622183 NLGN2Q8NFZ4 835 aa6.73□□□□□ -1.33
CPNE3-213ENST00000622183 JMJD8Q96S16 334 aa6.73□□□□□ -1.33
CPNE3-213ENST00000622183 ZKSCAN5Q9Y2L8 839 aa6.73□□□□□ -1.33
CPNE3-213ENST00000622183 WTIPA6NIX2 430 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-213ENST00000622183 PRNPP04156 253 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 ZGLP1P0C6A0 271 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 ADCYAP1R1P41586 468 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 LACTBP83111 547 aaPredicted RBP6.72□□□□□ -1.33
CPNE3-213ENST00000622183 BNIP3Q12983 259 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 ARHGAP44Q17R89 818 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 PRSS36Q5K4E3 855 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 CEP68Q76N32 757 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 NXPE1Q8N323 547 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 JDP2Q8WYK2 163 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 ALPK1Q96QP1 1244 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 KCNJ15Q99712 375 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 PUS7LQ9H0K6 701 aaKnown RBP6.72□□□□□ -1.33
CPNE3-213ENST00000622183 ADAMTS10Q9H324 1103 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 CRTAC1Q9NQ79 661 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 CATSPERZQ9NTU4 200 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 BTG4Q9NY30 223 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.72□□□□□ -1.33
CPNE3-213ENST00000622183 GULP1Q9UBP9 304 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 EBF1Q9UH73 591 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 CBLCQ9ULV8 474 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 G3BP2Q9UN86 482 aaKnown RBP6.72□□□□□ -1.33
CPNE3-213ENST00000622183 SLC5A6Q9Y289 635 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 THRAP3Q9Y2W1 955 aaKnown RBP6.72□□□□□ -1.33
CPNE3-213ENST00000622183 X6R8D5 127 aa6.72□□□□□ -1.33
CPNE3-213ENST00000622183 PTPDC1A2A3K4 754 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 ZNF561-AS1K7EIQ3 104 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 PPP1R11O60927 126 aaPredicted RBP6.71□□□□□ -1.34
CPNE3-213ENST00000622183 KATNA1O75449 491 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 FKBP9O95302 570 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 PDE6AP16499 860 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 ID4P47928 161 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 LSSP48449 732 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 IL2P60568 153 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 TMPRSS15P98073 1019 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 OCRLQ01968 901 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 ZP2Q05996 745 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 MTMR1Q13613 665 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 CRY1Q16526 586 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 HABP4Q5JVS0 413 aaKnown RBP6.71□□□□□ -1.34
CPNE3-213ENST00000622183 FKBP9P1Q75LS8 142 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 OTOP1Q7RTM1 612 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 TEX2Q8IWB9 1127 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 CISD2Q8N5K1 135 aaKnown RBP6.71□□□□□ -1.34
CPNE3-213ENST00000622183 C2orf69Q8N8R5 385 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 TRMT2BQ96GJ1 504 aaKnown RBP6.71□□□□□ -1.34
CPNE3-213ENST00000622183 JAM3Q9BX67 310 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 ASPSCR1Q9BZE9 553 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 MARCH2Q9P0N8 246 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 SLAMF8Q9P0V8 285 aa6.71□□□□□ -1.34
CPNE3-213ENST00000622183 C22orf46C9J442 243 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 COBLO75128 1261 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 USP2O75604 605 aaPredicted RBP6.7□□□□□ -1.34
CPNE3-213ENST00000622183 IGHA1P01876 353 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 CD8BP10966 210 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 GNAT1P11488 350 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 ATP2A2P16615 1042 aaKnown RBP6.7□□□□□ -1.34
CPNE3-213ENST00000622183 YBX3P16989 372 aaKnown RBP eCLIP6.7□□□□□ -1.34
CPNE3-213ENST00000622183 FPR2P25090 351 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 RTP1P59025 263 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 SPIRE1Q08AE8 756 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 RALGPS1Q5JS13 557 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 SPRED2Q7Z698 418 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 WFDC3Q8IUB2 231 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 RIOX2Q8IUF8 465 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 ANKS4BQ8N8V4 417 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 PLEKHO2Q8TD55 490 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 ASIC4Q96FT7 647 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 MTA3Q9BTC8 594 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 EPB41L1Q9H4G0 881 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 THG1LQ9NWX6 298 aaKnown RBP6.7□□□□□ -1.34
CPNE3-213ENST00000622183 TMEM59LQ9UK28 342 aa6.7□□□□□ -1.34
CPNE3-213ENST00000622183 ALDH1L1O75891 902 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 FUCA1P04066 466 aa6.69□□□□□ -1.34
CPNE3-213ENST00000622183 CHRNEQ04844 493 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms