RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	PGM5	Q15124	567 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	TCTN1	Q2MV58	587 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	NBPF20	Q3BBV1	942 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	DUSP28	Q4G0W2	176 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	BMP2KL	Q5H9B9	411 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	UTP14C	Q5TAP6	766 aa	Known RBP	5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	TYW1B	Q6NUM6	668 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	FAM117B	Q6P1L5	589 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	ZNF365	Q70YC5	407 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	C16orf59	Q7L2K0	433 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	OTOP2	Q7RTS6	562 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	FAM126B	Q8IXS8	530 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	MICALL1	Q8N3F8	863 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	CTCFL	Q8NI51	663 aa	Predicted RBP	5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	RASGRP4	Q8TDF6	673 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	MYLIP	Q8WY64	445 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	WNT8B	Q93098	351 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	GUCD1	Q96NT3	240 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	AMN	Q9BXJ7	453 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	HIPK3	Q9H422	1215 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	CERS4	Q9HA82	394 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	NCOA5	Q9HCD5	579 aa	Known RBP	5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	TMEM260	Q9NX78	707 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	ADD3	Q9UEY8	706 aa	Known RBP	5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	NRBP1	Q9UHY1	535 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	TBX21	Q9UL17	535 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	MRPL11	Q9Y3B7	192 aa	Known RBP	5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	MRVI1	Q9Y6F6	885 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	CNTNAP5	Q8WYK1	1306 aa		5.17	□□□□□ -1.58
LINC00649-219	ENST00000622171	TRANK1	O15050	2925 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	MOXD2P	A6NHM9	499 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	GCOM1	H8Y6P7	765 aa	Predicted RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	DDX39A	O00148	427 aa	Known RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	KIAA0355	O15063	1070 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	ARHGEF15	O94989	841 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	NR3C2	P08235	984 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	MMP3	P08254	477 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	POLR2M	P0CAP2	368 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	FDX1	P10109	184 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	UBA1	P22314	1058 aa	Known RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	EDNRB	P24530	442 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	MARK3	P27448	753 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	CST5	P28325	142 aa	Predicted RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	CDC27	P30260	824 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	MCM5	P33992	734 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	CCT2	P78371	535 aa	Known RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	FGD1	P98174	961 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	SEMA3F	Q13275	785 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	TTLL4	Q14679	1199 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	NECTIN1	Q15223	517 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	CCDC178	Q5BJE1	867 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	WWC2	Q6AWC2	1192 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	GDF6	Q6KF10	455 aa	Predicted RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171		Q6ZUG5	572 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	TRMT1L	Q7Z2T5	733 aa	Known RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	MSL3	Q8N5Y2	521 aa	Known RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	PCSK9	Q8NBP7	692 aa	Known RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	SMARCC2	Q8TAQ2	1214 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	SCFD2	Q8WU76	684 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	ANKS1A	Q92625	1134 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	BRF1	Q92994	677 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	PHKB	Q93100	1093 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	RRP36	Q96EU6	259 aa	Known RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	PDCD2L	Q9BRP1	358 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	NOC4L	Q9BVI4	516 aa	Known RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	OSBPL7	Q9BZF2	842 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	UPF3B	Q9BZI7	483 aa	Known RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	NKX2-4	Q9H2Z4	354 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	TTYH1	Q9H313	450 aa	Predicted RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	PRDM6	Q9NQX0	595 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	SEC63	Q9UGP8	760 aa	Known RBP	5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	NOD1	Q9Y239	953 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	SNX14	Q9Y5W7	946 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	SLC12A7	Q9Y666	1083 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	TTC28	Q96AY4	2481 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	C5orf42	Q9H799	3197 aa		5.16	□□□□□ -1.58
LINC00649-219	ENST00000622171	PNMA6F	A0A0J9YX94	578 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	RFXAP	O00287	272 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	TLR3	O15455	904 aa	Known RBP	5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	DDAH1	O94760	285 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	TIMP1	P01033	207 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	GH1	P01241	217 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	CD4	P01730	458 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	CAST	P20810	708 aa	Known RBP	5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	CCND2	P30279	289 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	BMP8B	P34820	402 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	PSEN2	P49810	448 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	CDK7	P50613	346 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	HSD17B4	P51659	736 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	NAPA	P54920	295 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	IGBP1	P78318	339 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	MRPS9	P82933	396 aa	Known RBP	5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	STXBP2	Q15833	593 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	CCDC85B	Q15834	202 aa	Predicted RBP	5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	RTN1	Q16799	776 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	HSDL1	Q3SXM5	330 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	TMEM240	Q5SV17	173 aa		5.15	□□□□□ -1.59
LINC00649-219	ENST00000622171	ZNF697	Q5TEC3	545 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms