RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 HSF2BPO75031 334 aa17.46■□□□□ 0.39
NPHP4-211ENST00000622020 TDP2O95551 362 aa17.46■□□□□ 0.39
NPHP4-211ENST00000622020 SOGA3Q5TF21 947 aa17.46■□□□□ 0.39
NPHP4-211ENST00000622020 TBC1D9BQ66K14 1250 aa17.46■□□□□ 0.39
NPHP4-211ENST00000622020 NEK8Q86SG6 692 aa17.46■□□□□ 0.39
NPHP4-211ENST00000622020 TADA2BQ86TJ2 420 aa17.46■□□□□ 0.39
NPHP4-211ENST00000622020 FNBP4Q8N3X1 1017 aaPredicted RBP17.46■□□□□ 0.39
NPHP4-211ENST00000622020 GUCY1A3Q02108 690 aa17.46■□□□□ 0.39
NPHP4-211ENST00000622020 PPFIA1Q13136 1202 aa17.46■□□□□ 0.39
NPHP4-211ENST00000622020 KCNK18Q7Z418 384 aa17.46■□□□□ 0.39
NPHP4-211ENST00000622020 KLHL7Q8IXQ5 586 aa17.46■□□□□ 0.39
NPHP4-211ENST00000622020 MMGT1Q8N4V1 131 aa17.46■□□□□ 0.39
NPHP4-211ENST00000622020 SRP68Q9UHB9 627 aaKnown RBP17.46■□□□□ 0.39
NPHP4-211ENST00000622020 AMPD3Q01432 767 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 EHHADHQ08426 723 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 DDB1Q16531 1140 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 CLEC10AQ8IUN9 316 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 KRT12Q99456 494 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 C7orf25Q9BPX7 421 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 ZHX3Q9H4I2 956 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 SH3GLB2Q9NR46 395 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 ANKIB1Q9P2G1 1089 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 LRP5O75197 1615 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 NDUFAB1O14561 156 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 SLC37A4O43826 429 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 ZSCAN29Q8IWY8 852 aaPredicted RBP17.45■□□□□ 0.38
NPHP4-211ENST00000622020 KAT2BQ92831 832 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 BLOC1S4Q9NUP1 217 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 ZNF652Q9Y2D9 606 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 PLCH1Q4KWH8 1693 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 SHTN1A0MZ66 631 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 TRAF5O00463 557 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 PALMO75781 387 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 ERLIN2O94905 339 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 HEXIM1O94992 359 aaKnown RBP17.45■□□□□ 0.38
NPHP4-211ENST00000622020 POLR2FP61218 127 aaKnown RBP17.45■□□□□ 0.38
NPHP4-211ENST00000622020 GRB10Q13322 594 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 NNTQ13423 1086 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 KLHDC7AQ5VTJ3 777 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 ICE2Q659A1 982 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 PACSIN1Q9BY11 444 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 ANKRD36CQ5JPF3 1778 aa17.45■□□□□ 0.38
NPHP4-211ENST00000622020 CCDC40Q4G0X9 1142 aa17.44■□□□□ 0.38
NPHP4-211ENST00000622020 GRIN2DO15399 1336 aa17.44■□□□□ 0.38
NPHP4-211ENST00000622020 EIF3HO15372 352 aaKnown RBP eCLIP17.44■□□□□ 0.38
NPHP4-211ENST00000622020 LDHBP07195 334 aaKnown RBP17.44■□□□□ 0.38
NPHP4-211ENST00000622020 CENPPQ6IPU0 288 aa17.44■□□□□ 0.38
NPHP4-211ENST00000622020 EFCAB13Q8IY85 973 aa17.44■□□□□ 0.38
NPHP4-211ENST00000622020 LARP4BQ92615 738 aaKnown RBP17.44■□□□□ 0.38
NPHP4-211ENST00000622020 DDX12PQ92771 950 aa17.44■□□□□ 0.38
NPHP4-211ENST00000622020 FGFBP2Q9BYJ0 223 aa17.44■□□□□ 0.38
NPHP4-211ENST00000622020 C6orf50Q9HD87 102 aa17.44■□□□□ 0.38
NPHP4-211ENST00000622020 SEC63Q9UGP8 760 aaKnown RBP17.44■□□□□ 0.38
NPHP4-211ENST00000622020 ADAMTS1Q9UHI8 967 aa17.44■□□□□ 0.38
NPHP4-211ENST00000622020 MARCH6O60337 910 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 MYL1P05976 194 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 TCP1P17987 556 aaKnown RBP17.43■□□□□ 0.38
NPHP4-211ENST00000622020 HPDP32754 393 aaPredicted RBP17.43■□□□□ 0.38
NPHP4-211ENST00000622020 GNAQP50148 359 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 EPHB4P54760 987 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 CALCRLQ16602 461 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 MAN2A1Q16706 1144 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 SNX29Q8TEQ0 813 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 TBC1D5Q92609 795 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 NOX5Q96PH1 765 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 RAD21O60216 631 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 TNNI2P48788 182 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 SEC24CP53992 1094 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 RAPGEF1Q13905 1077 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 SBK1Q52WX2 424 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 PNMA5Q96PV4 448 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 ZMYND12Q9H0C1 365 aa17.43■□□□□ 0.38
NPHP4-211ENST00000622020 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
NPHP4-211ENST00000622020 USP17L5A8MUK1 530 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 SHOX2O60902 331 aaPredicted RBP17.42■□□□□ 0.38
NPHP4-211ENST00000622020 KLRC1P26715 233 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 KCNMA1Q12791 1236 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 ZNF662Q6ZS27 426 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 REXO1Q8N1G1 1221 aaKnown RBP17.42■□□□□ 0.38
NPHP4-211ENST00000622020 BAP1Q92560 729 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 NLRP3Q96P20 1036 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 EYA3Q99504 573 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 ARAP2Q8WZ64 1704 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 A0A087WUV0 522 aaPredicted RBP17.42■□□□□ 0.38
NPHP4-211ENST00000622020 NPHP3-ACAD11A0A0J9YXS1 232 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 A0A1W2PQJ5 194 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 OPA1O60313 960 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 RASA1P20936 1047 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 IBSPP21815 317 aaPredicted RBP17.42■□□□□ 0.38
NPHP4-211ENST00000622020 SF3B3Q15393 1217 aaKnown RBP17.42■□□□□ 0.38
NPHP4-211ENST00000622020 ECM1Q16610 540 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 CFAP58Q5T655 872 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 KRT25Q7Z3Z0 450 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 NBPF5PQ86XG9 351 aaPredicted RBP17.42■□□□□ 0.38
NPHP4-211ENST00000622020 MARCH10Q8NA82 808 aaPredicted RBP17.42■□□□□ 0.38
NPHP4-211ENST00000622020 SF3A3Q12874 501 aaKnown RBP eCLIP17.42■□□□□ 0.386e-7■■■■■ 34.3
NPHP4-211ENST00000622020 HLTFQ14527 1009 aaKnown RBP eCLIP17.42■□□□□ 0.38
NPHP4-211ENST00000622020 UBE2SQ16763 222 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 MAATS1Q7Z4T9 603 aa17.42■□□□□ 0.38
NPHP4-211ENST00000622020 FAM133AQ8N9E0 248 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms