RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 DNAJC19Q96DA6 116 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 MASTLQ96GX5 879 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 CDK5RAP3Q96JB5 506 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 PURBQ96QR8 312 aaKnown RBP10.51□□□□□ -0.73
PDPN-212ENST00000621990 IDI2Q9BXS1 227 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
PDPN-212ENST00000621990 SCN9AQ15858 1988 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 NKRFO15226 690 aaKnown RBP eCLIP10.5□□□□□ -0.73
PDPN-212ENST00000621990 SASH3O75995 380 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 KIF20AO95235 890 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 FGFR1OPO95684 399 aaKnown RBP10.5□□□□□ -0.73
PDPN-212ENST00000621990 ECM1Q16610 540 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 ZCWPW2Q504Y3 356 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 FKBP15Q5T1M5 1219 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 TATDN1Q6P1N9 297 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 MOXD1Q6UVY6 613 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 EHBP1Q8NDI1 1231 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 CRYGNQ8WXF5 182 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 DDX12PQ92771 950 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 ARFGAP3Q9NP61 516 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 KCNMB3Q9NPA1 279 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 NYAP2Q9P242 653 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 ATAD5Q96QE3 1844 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 PES1O00541 588 aaKnown RBP10.5□□□□□ -0.73
PDPN-212ENST00000621990 SEC31AO94979 1220 aaKnown RBP10.5□□□□□ -0.73
PDPN-212ENST00000621990 CYLC1P35663 651 aaPredicted RBP10.5□□□□□ -0.73
PDPN-212ENST00000621990 USP11P51784 963 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 MAN2A1Q16706 1144 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 PAPD7Q5XG87 772 aaKnown RBP10.5□□□□□ -0.73
PDPN-212ENST00000621990 ARHGAP27Q6ZUM4 889 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 KCTD1Q719H9 257 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 COL23A1Q86Y22 540 aaPredicted RBP10.5□□□□□ -0.73
PDPN-212ENST00000621990 ZFPM1Q8IX07 1006 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 FUT8Q9BYC5 575 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 NDST4Q9H3R1 872 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 NHEJ1Q9H9Q4 299 aaPredicted RBP10.5□□□□□ -0.73
PDPN-212ENST00000621990 ZNHIT6Q9NWK9 470 aaKnown RBP10.5□□□□□ -0.73
PDPN-212ENST00000621990 TRIM10Q9UDY6 481 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 MYO6Q9UM54 1294 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 PLAGL2Q9UPG8 496 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 KDM3AQ9Y4C1 1321 aa10.5□□□□□ -0.73
PDPN-212ENST00000621990 LCA5LO95447 670 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 HSPA1LP34931 641 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 SLC16A2P36021 539 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 CCDC96Q2M329 555 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 STRIP1Q5VSL9 837 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 CCDC84Q86UT8 332 aaPredicted RBP10.49□□□□□ -0.73
PDPN-212ENST00000621990 MSL3Q8N5Y2 521 aaKnown RBP10.49□□□□□ -0.73
PDPN-212ENST00000621990 EEF2KMTQ96G04 330 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 NT5C3AQ9H0P0 336 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 KANSL2Q9H9L4 492 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 COL2A1P02458 1487 aaPredicted RBP10.49□□□□□ -0.73
PDPN-212ENST00000621990 MAP2K7O14733 419 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 TUBBP07437 444 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 QRICH1Q2TAL8 776 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 DACT2Q5SW24 774 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 DYMQ7RTS9 669 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 PI4KBQ9UBF8 816 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 FAM198AQ9UFP1 575 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 PUF60Q9UHX1 559 aaKnown RBP10.49□□□□□ -0.73
PDPN-212ENST00000621990 PCDHA12Q9UN75 941 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 CTAGE15A4D2H0 777 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 MPHOSPH10O00566 681 aaKnown RBP10.49□□□□□ -0.73
PDPN-212ENST00000621990 PLSCR1O15162 318 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 CTAGE8P0CG41 777 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 EEF2P13639 858 aaKnown RBP10.49□□□□□ -0.73
PDPN-212ENST00000621990 AP3B2Q13367 1082 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 MCTP2Q6DN12 878 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 SH3BP5LQ7L8J4 393 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 CTAGE6Q86UF2 777 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 SIAH1Q8IUQ4 282 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 CTAGE4Q8IX94 777 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 GMCL1P1Q8NEA9 526 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 EDEM3Q9BZQ6 932 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 ST7Q9NRC1 585 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 GUCA1BQ9UMX6 200 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 PCDHA2Q9Y5H9 948 aa10.49□□□□□ -0.73
PDPN-212ENST00000621990 ATRNL1Q5VV63 1379 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 ANO9A1A5B4 782 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 RCCD1A6NED2 376 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 KRT86O43790 486 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 COASYQ13057 564 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 CCDC122Q5T0U0 273 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 JAKMIP2Q96AA8 810 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 PNKPQ96T60 521 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 FRMD3A2A2Y4 597 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 DDTLA6NHG4 134 aaPredicted RBP10.48□□□□□ -0.73
PDPN-212ENST00000621990 MEIS2O14770 477 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 MARSP56192 900 aaKnown RBP10.48□□□□□ -0.73
PDPN-212ENST00000621990 LONRF2Q1L5Z9 754 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 BEND6Q5SZJ8 279 aaPredicted RBP10.48□□□□□ -0.73
PDPN-212ENST00000621990 ZC3H3Q8IXZ2 948 aaKnown RBP10.48□□□□□ -0.73
PDPN-212ENST00000621990 MYOCDQ8IZQ8 938 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 FLAD1Q8NFF5 587 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 GMCL1Q96IK5 515 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 TSGA10Q9BZW7 698 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 LACRTQ9GZZ8 138 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 TMX4Q9H1E5 349 aaPredicted RBP10.48□□□□□ -0.73
PDPN-212ENST00000621990 ZSWIM4Q9H7M6 989 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 KCNQ5Q9NR82 932 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms