RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 EPN3Q9H201 632 aa8.03□□□□□ -1.12
VPS29-212ENST00000621131 BTG4Q9NY30 223 aa8.03□□□□□ -1.12
VPS29-212ENST00000621131 RTEL1Q9NZ71 1219 aa8.03□□□□□ -1.12
VPS29-212ENST00000621131 X6R8D5 127 aa8.03□□□□□ -1.12
VPS29-212ENST00000621131 NCANO14594 1321 aa8.03□□□□□ -1.12
VPS29-212ENST00000621131 A0A1B0GTL3 188 aa8.02□□□□□ -1.13
VPS29-212ENST00000621131 SH3D21A4FU49 640 aa8.02□□□□□ -1.13
VPS29-212ENST00000621131 MEFVO15553 781 aaPredicted RBP8.02□□□□□ -1.13
VPS29-212ENST00000621131 KLF4O43474 513 aa8.02□□□□□ -1.13
VPS29-212ENST00000621131 BCL6P41182 706 aa8.02□□□□□ -1.13
VPS29-212ENST00000621131 RPL11P62913 178 aaKnown RBP8.02□□□□□ -1.13
VPS29-212ENST00000621131 SLC10A6Q3KNW5 377 aa8.02□□□□□ -1.13
VPS29-212ENST00000621131 ANKS3Q6ZW76 656 aa8.02□□□□□ -1.13
VPS29-212ENST00000621131 CEP68Q76N32 757 aa8.02□□□□□ -1.13
VPS29-212ENST00000621131 DCP2Q8IU60 420 aaKnown RBP8.02□□□□□ -1.13
VPS29-212ENST00000621131 RIOX2Q8IUF8 465 aa8.02□□□□□ -1.13
VPS29-212ENST00000621131 ZDHHC14Q8IZN3 488 aa8.02□□□□□ -1.13
VPS29-212ENST00000621131 RCBTB1Q8NDN9 531 aa8.02□□□□□ -1.13
VPS29-212ENST00000621131 C1orf159Q96HA4 380 aa8.02□□□□□ -1.13
VPS29-212ENST00000621131 ST7Q9NRC1 585 aa8.02□□□□□ -1.13
VPS29-212ENST00000621131 FOXD2O60548 495 aaPredicted RBP8.01□□□□□ -1.13
VPS29-212ENST00000621131 FPR2P25090 351 aa8.01□□□□□ -1.13
VPS29-212ENST00000621131 GRIA2P42262 883 aa8.01□□□□□ -1.13
VPS29-212ENST00000621131 KCNC1P48547 511 aa8.01□□□□□ -1.13
VPS29-212ENST00000621131 KCNAB2Q13303 367 aa8.01□□□□□ -1.13
VPS29-212ENST00000621131 NFIXQ14938 502 aa8.01□□□□□ -1.13
VPS29-212ENST00000621131 LIPIQ6XZB0 460 aa8.01□□□□□ -1.13
VPS29-212ENST00000621131 NLRP10Q86W26 655 aa8.01□□□□□ -1.13
VPS29-212ENST00000621131 TMEM145Q8NBT3 493 aa8.01□□□□□ -1.13
VPS29-212ENST00000621131 SPATA6Q9NWH7 488 aaPredicted RBP8.01□□□□□ -1.13
VPS29-212ENST00000621131 A0A1W2PQU0 124 aa8□□□□□ -1.13
VPS29-212ENST00000621131 LCP1P13796 627 aa8□□□□□ -1.13
VPS29-212ENST00000621131 KCNJ6P48051 423 aa8□□□□□ -1.13
VPS29-212ENST00000621131 SLC6A11P48066 632 aa8□□□□□ -1.13
VPS29-212ENST00000621131 GTF2A2P52657 109 aa8□□□□□ -1.13
VPS29-212ENST00000621131 SLC35F1Q5T1Q4 408 aa8□□□□□ -1.13
VPS29-212ENST00000621131 MROH9Q5TGP6 573 aa8□□□□□ -1.13
VPS29-212ENST00000621131 SEC14L1Q92503 715 aa8□□□□□ -1.13
VPS29-212ENST00000621131 FBXL7Q9UJT9 491 aa8□□□□□ -1.13
VPS29-212ENST00000621131 R3HCC1Q9Y3T6 440 aaKnown RBP8□□□□□ -1.13
VPS29-212ENST00000621131 NPFFR2Q9Y5X5 522 aa8□□□□□ -1.13
VPS29-212ENST00000621131 C8BP07358 591 aa7.99□□□□□ -1.13
VPS29-212ENST00000621131 LTBRP36941 435 aa7.99□□□□□ -1.13
VPS29-212ENST00000621131 PPP2R2AP63151 447 aa7.99□□□□□ -1.13
VPS29-212ENST00000621131 DDR2Q16832 855 aa7.99□□□□□ -1.13
VPS29-212ENST00000621131 MIB1Q86YT6 1006 aa7.99□□□□□ -1.13
VPS29-212ENST00000621131 PPIL6Q8IXY8 311 aa7.99□□□□□ -1.13
VPS29-212ENST00000621131 LINC00482Q8N8I6 264 aa7.99□□□□□ -1.13
VPS29-212ENST00000621131 CXorf38Q8TB03 319 aa7.99□□□□□ -1.13
VPS29-212ENST00000621131 DDX11Q96FC9 970 aa7.99□□□□□ -1.13
VPS29-212ENST00000621131 TRMT2BQ96GJ1 504 aaKnown RBP7.99□□□□□ -1.13
VPS29-212ENST00000621131 AP5M1Q9H0R1 490 aa7.99□□□□□ -1.13
VPS29-212ENST00000621131 TMEM169Q96HH4 297 aa7.98□□□□□ -1.13
VPS29-212ENST00000621131 SYT3Q9BQG1 590 aa7.98□□□□□ -1.13
VPS29-212ENST00000621131 PALD1Q9ULE6 856 aa7.98□□□□□ -1.13
VPS29-212ENST00000621131 PCDHA2Q9Y5H9 948 aa7.98□□□□□ -1.13
VPS29-212ENST00000621131 AGRPO00253 132 aa7.97□□□□□ -1.13
VPS29-212ENST00000621131 MYO1BO43795 1136 aa7.97□□□□□ -1.13
VPS29-212ENST00000621131 LSAMPQ13449 338 aa7.97□□□□□ -1.13
VPS29-212ENST00000621131 ETV3LQ6ZN32 361 aa7.97□□□□□ -1.13
VPS29-212ENST00000621131 FRMD5Q7Z6J6 570 aa7.97□□□□□ -1.13
VPS29-212ENST00000621131 MILR1Q7Z6M3 343 aa7.97□□□□□ -1.13
VPS29-212ENST00000621131 CARFQ8N187 725 aa7.97□□□□□ -1.13
VPS29-212ENST00000621131 FAM26EQ8N5C1 309 aa7.97□□□□□ -1.13
VPS29-212ENST00000621131 GORASP1Q9BQQ3 440 aa7.97□□□□□ -1.13
VPS29-212ENST00000621131 SPATA25Q9BR10 227 aa7.97□□□□□ -1.13
VPS29-212ENST00000621131 H7BY64 318 aa7.96□□□□□ -1.14
VPS29-212ENST00000621131 DLX3O60479 287 aa7.96□□□□□ -1.14
VPS29-212ENST00000621131 CYP2C8P10632 490 aa7.96□□□□□ -1.14
VPS29-212ENST00000621131 BUD31P41223 144 aaPredicted RBP7.96□□□□□ -1.14
VPS29-212ENST00000621131 MAP4K2Q12851 820 aa7.96□□□□□ -1.14
VPS29-212ENST00000621131 ZBTB8AQ96BR9 441 aa7.96□□□□□ -1.14
VPS29-212ENST00000621131 SGSM3Q96HU1 749 aa7.96□□□□□ -1.14
VPS29-212ENST00000621131 TEPSINQ96N21 525 aa7.96□□□□□ -1.14
VPS29-212ENST00000621131 ADAM7Q9H2U9 754 aa7.96□□□□□ -1.14
VPS29-212ENST00000621131 CDIP1Q9H305 208 aa7.96□□□□□ -1.14
VPS29-212ENST00000621131 E9PSI1 815 aa7.95□□□□□ -1.14
VPS29-212ENST00000621131 SYN1P17600 705 aa7.95□□□□□ -1.14
VPS29-212ENST00000621131 CD300LDQ6UXZ3 194 aa7.95□□□□□ -1.14
VPS29-212ENST00000621131 KCTD13Q8WZ19 329 aa7.95□□□□□ -1.14
VPS29-212ENST00000621131 C11orf84Q9BUA3 381 aaPredicted RBP7.95□□□□□ -1.14
VPS29-212ENST00000621131 PCDH18Q9HCL0 1135 aa7.95□□□□□ -1.14
VPS29-212ENST00000621131 EIF4G1Q04637 1599 aaKnown RBP7.95□□□□□ -1.14
VPS29-212ENST00000621131 TADA3O75528 432 aa7.94□□□□□ -1.14
VPS29-212ENST00000621131 SARSP49591 514 aaKnown RBP7.94□□□□□ -1.14
VPS29-212ENST00000621131 SMAD4Q13485 552 aaKnown RBP7.94□□□□□ -1.14
VPS29-212ENST00000621131 RAB33AQ14088 237 aa7.94□□□□□ -1.14
VPS29-212ENST00000621131 ZFYVE27Q5T4F4 411 aa7.94□□□□□ -1.14
VPS29-212ENST00000621131 FAM126BQ8IXS8 530 aa7.94□□□□□ -1.14
VPS29-212ENST00000621131 IER2Q9BTL4 223 aa7.94□□□□□ -1.14
VPS29-212ENST00000621131 COA3Q9Y2R0 106 aaPredicted RBP7.94□□□□□ -1.14
VPS29-212ENST00000621131 SCRIBQ14160 1630 aa7.93□□□□□ -1.14
VPS29-212ENST00000621131 HGSO14964 777 aaPredicted RBP7.93□□□□□ -1.14
VPS29-212ENST00000621131 NOBOXO60393 691 aa7.93□□□□□ -1.14
VPS29-212ENST00000621131 HSP90AA2PQ14568 343 aaPredicted RBP7.93□□□□□ -1.14
VPS29-212ENST00000621131 CR1LQ2VPA4 569 aa7.93□□□□□ -1.14
VPS29-212ENST00000621131 NT5DC1Q5TFE4 455 aa7.93□□□□□ -1.14
VPS29-212ENST00000621131 TTLL7Q6ZT98 887 aa7.93□□□□□ -1.14
VPS29-212ENST00000621131 CHAMP1Q96JM3 812 aa7.93□□□□□ -1.14
VPS29-212ENST00000621131 CLDND1Q9NY35 253 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms