RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 TIFAQ96CG3 184 aa13.22□□□□□ -0.29
LINC00649-218ENST00000620580 IWS1Q96ST2 819 aa13.22□□□□□ -0.29
LINC00649-218ENST00000620580 MYL10Q9BUA6 226 aa13.22□□□□□ -0.29
LINC00649-218ENST00000620580 SEZ6LQ9BYH1 1024 aa13.22□□□□□ -0.29
LINC00649-218ENST00000620580 ZNF576Q9H609 170 aa13.22□□□□□ -0.29
LINC00649-218ENST00000620580 VCANP13611 3396 aa13.22□□□□□ -0.29
LINC00649-218ENST00000620580 SCN5AQ14524 2016 aa13.22□□□□□ -0.29
LINC00649-218ENST00000620580 CHD9Q3L8U1 2897 aa13.22□□□□□ -0.29
LINC00649-218ENST00000620580 TET1Q8NFU7 2136 aa13.21□□□□□ -0.29
LINC00649-218ENST00000620580 ERICH2A1L162 156 aa13.21□□□□□ -0.29
LINC00649-218ENST00000620580 EIF3JO75822 258 aaKnown RBP13.21□□□□□ -0.29
LINC00649-218ENST00000620580 RGS20O76081 388 aa13.21□□□□□ -0.29
LINC00649-218ENST00000620580 GH1P01241 217 aa13.21□□□□□ -0.29
LINC00649-218ENST00000620580 MMP3P08254 477 aa13.21□□□□□ -0.29
LINC00649-218ENST00000620580 GHRHRQ02643 423 aa13.21□□□□□ -0.29
LINC00649-218ENST00000620580 DEFB128Q7Z7B8 93 aa13.21□□□□□ -0.29
LINC00649-218ENST00000620580 MAFAQ8NHW3 353 aaPredicted RBP13.21□□□□□ -0.29
LINC00649-218ENST00000620580 KAT2BQ92831 832 aa13.21□□□□□ -0.29
LINC00649-218ENST00000620580 PDCD2LQ9BRP1 358 aa13.21□□□□□ -0.29
LINC00649-218ENST00000620580 MAF1Q9H063 256 aa13.21□□□□□ -0.29
LINC00649-218ENST00000620580 LSG1Q9H089 658 aaKnown RBP13.21□□□□□ -0.29
LINC00649-218ENST00000620580 TRIP12Q14669 1992 aaPredicted RBP13.21□□□□□ -0.29
LINC00649-218ENST00000620580 KIAA1217Q5T5P2 1943 aa13.21□□□□□ -0.3
LINC00649-218ENST00000620580 MYH7BA7E2Y1 1941 aa13.2□□□□□ -0.3
LINC00649-218ENST00000620580 TMEM265A0A087WTH1 108 aa13.2□□□□□ -0.3
LINC00649-218ENST00000620580 KPNA6O60684 536 aa13.2□□□□□ -0.3
LINC00649-218ENST00000620580 SUPT20HL2P0C7V6 817 aa13.2□□□□□ -0.3
LINC00649-218ENST00000620580 FOSL2P15408 326 aa13.2□□□□□ -0.3
LINC00649-218ENST00000620580 RABGGTBP53611 331 aa13.2□□□□□ -0.3
LINC00649-218ENST00000620580 NFRKBQ6P4R8 1299 aa13.2□□□□□ -0.3
LINC00649-218ENST00000620580 CATIPQ7Z7H3 387 aa13.2□□□□□ -0.3
LINC00649-218ENST00000620580 FCHSD1Q86WN1 690 aa13.2□□□□□ -0.3
LINC00649-218ENST00000620580 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
LINC00649-218ENST00000620580 GPKOWQ92917 476 aaPredicted RBP eCLIP13.2□□□□□ -0.3
LINC00649-218ENST00000620580 CTAGE1Q96RT6 745 aa13.2□□□□□ -0.3
LINC00649-218ENST00000620580 LY9Q9HBG7 655 aa13.2□□□□□ -0.3
LINC00649-218ENST00000620580 YBX2Q9Y2T7 364 aaKnown RBP13.2□□□□□ -0.3
LINC00649-218ENST00000620580 MRVI1Q9Y6F6 885 aa13.2□□□□□ -0.3
LINC00649-218ENST00000620580 SPTBN5Q9NRC6 3674 aaKnown RBP13.19□□□□□ -0.3
LINC00649-218ENST00000620580 PNMA6FA0A0J9YX94 578 aa13.19□□□□□ -0.3
LINC00649-218ENST00000620580 GCOM1H8Y6P7 765 aaPredicted RBP13.19□□□□□ -0.3
LINC00649-218ENST00000620580 POLR2MP0CAP2 368 aa13.19□□□□□ -0.3
LINC00649-218ENST00000620580 MYOGP15173 224 aa13.19□□□□□ -0.3
LINC00649-218ENST00000620580 SP2Q02086 613 aa13.19□□□□□ -0.3
LINC00649-218ENST00000620580 SART3Q15020 963 aaKnown RBP13.19□□□□□ -0.3
LINC00649-218ENST00000620580 PGM5Q15124 567 aa13.19□□□□□ -0.3
LINC00649-218ENST00000620580 GDF6Q6KF10 455 aaPredicted RBP13.19□□□□□ -0.3
LINC00649-218ENST00000620580 VSIG10LQ86VR7 867 aa13.19□□□□□ -0.3
LINC00649-218ENST00000620580 RAB11FIP4Q86YS3 637 aa13.19□□□□□ -0.3
LINC00649-218ENST00000620580 RPUSD2Q8IZ73 545 aaKnown RBP13.19□□□□□ -0.3
LINC00649-218ENST00000620580 ESYT1Q9BSJ8 1104 aa13.19□□□□□ -0.3
LINC00649-218ENST00000620580 LRRC2Q9BYS8 371 aa13.19□□□□□ -0.3
LINC00649-218ENST00000620580 NKX2-4Q9H2Z4 354 aa13.19□□□□□ -0.3
LINC00649-218ENST00000620580 BCAS3Q9H6U6 928 aa13.19□□□□□ -0.3
LINC00649-218ENST00000620580 ZBBXA8MT70 800 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 SLC27A2O14975 620 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 PRC1O43663 620 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 IQCF3P0C7M6 154 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 ZNF286BP0CG31 522 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 RXRAP19793 462 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
LINC00649-218ENST00000620580 PTPN11Q06124 597 aaPredicted RBP13.18□□□□□ -0.3
LINC00649-218ENST00000620580 PTGISQ16647 500 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 ZNF654Q8IZM8 581 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 CMTR1Q8N1G2 835 aaKnown RBP13.18□□□□□ -0.3
LINC00649-218ENST00000620580 USP38Q8NB14 1042 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 ALG1Q9BT22 464 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 PRDM12Q9H4Q4 367 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 CHD7Q9P2D1 2997 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 TTC28Q96AY4 2481 aa13.18□□□□□ -0.3
LINC00649-218ENST00000620580 GBF1Q92538 1859 aa13.17□□□□□ -0.3
LINC00649-218ENST00000620580 SH2B2O14492 632 aaPredicted RBP13.17□□□□□ -0.3
LINC00649-218ENST00000620580 PLEKHA8P1O95397 391 aa13.17□□□□□ -0.3
LINC00649-218ENST00000620580 PSEN2P49810 448 aa13.17□□□□□ -0.3
LINC00649-218ENST00000620580 ZNF200P98182 395 aaPredicted RBP13.17□□□□□ -0.3
LINC00649-218ENST00000620580 LAMC2Q13753 1193 aa13.17□□□□□ -0.3
LINC00649-218ENST00000620580 DGKDQ16760 1214 aa13.17□□□□□ -0.3
LINC00649-218ENST00000620580 MYSM1Q5VVJ2 828 aa13.17□□□□□ -0.3
LINC00649-218ENST00000620580 CREB3L3Q68CJ9 461 aa13.17□□□□□ -0.3
LINC00649-218ENST00000620580 DHX37Q8IY37 1157 aaKnown RBP13.17□□□□□ -0.3
LINC00649-218ENST00000620580 SRBD1Q8N5C6 995 aaKnown RBP13.17□□□□□ -0.3
LINC00649-218ENST00000620580 DHX38Q92620 1227 aaKnown RBP13.17□□□□□ -0.3
LINC00649-218ENST00000620580 EMID1Q96A84 441 aaPredicted RBP13.17□□□□□ -0.3
LINC00649-218ENST00000620580 COL25A1Q9BXS0 654 aaPredicted RBP13.17□□□□□ -0.3
LINC00649-218ENST00000620580 MAP3K20Q9NYL2 800 aaKnown RBP13.17□□□□□ -0.3
LINC00649-218ENST00000620580 HDAC6Q9UBN7 1215 aa13.17□□□□□ -0.3
LINC00649-218ENST00000620580 MSRAQ9UJ68 235 aa13.17□□□□□ -0.3
LINC00649-218ENST00000620580 NOD1Q9Y239 953 aa13.17□□□□□ -0.3
LINC00649-218ENST00000620580 SLC4A7Q9Y6M7 1214 aa13.17□□□□□ -0.3
LINC00649-218ENST00000620580 hCG_1642624A0A1W2PR95 340 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 GGPS1O95749 300 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 UBA1P22314 1058 aaKnown RBP13.16□□□□□ -0.3
LINC00649-218ENST00000620580 CCND2P30279 289 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
LINC00649-218ENST00000620580 ADGRE1Q14246 886 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 HIC1Q14526 733 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 GPNMBQ14956 572 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 HSDL1Q3SXM5 330 aa13.16□□□□□ -0.3
LINC00649-218ENST00000620580 CELF3Q5SZQ8 465 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms