RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 STARD3NLO95772 234 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 CYP19A1P11511 503 aaPredicted RBP11.41□□□□□ -0.58
VPS11-207ENST00000620429 ZNF24P17028 368 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 METAP2P50579 478 aaKnown RBP eCLIP11.41□□□□□ -0.58
VPS11-207ENST00000620429 INHBCP55103 352 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 SFMBT2Q5VUG0 894 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 ANO7Q6IWH7 933 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 APTXQ7Z2E3 356 aaKnown RBP11.41□□□□□ -0.58
VPS11-207ENST00000620429 PNMA8AQ86V59 439 aaPredicted RBP11.41□□□□□ -0.58
VPS11-207ENST00000620429 CNBD1Q8NA66 436 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 CAPZA3Q96KX2 299 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 TRAPPC9Q96Q05 1148 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 DMGDHQ9UI17 866 aaKnown RBP11.41□□□□□ -0.58
VPS11-207ENST00000620429 DACH1Q9UI36 760 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 IFIT3O14879 490 aaKnown RBP11.41□□□□□ -0.58
VPS11-207ENST00000620429 MPP3Q13368 585 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 ADAM9Q13443 819 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 TMED1Q13445 227 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 TRIM29Q14134 588 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 TTC39AQ5SRH9 613 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 FAM114A1Q8IWE2 563 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 MLKLQ8NB16 471 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 CAGE1Q8TC20 777 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 CEP131Q9UPN4 1083 aa11.41□□□□□ -0.58
VPS11-207ENST00000620429 MAP3K13O43283 966 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 CASP14P31944 242 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 PAK2Q13177 524 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 TAF11Q15544 211 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.58
VPS11-207ENST00000620429 CPLX3Q8WVH0 158 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 OPTNQ96CV9 577 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 POLD4Q9HCU8 107 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 SAMSN1Q9NSI8 373 aaKnown RBP11.4□□□□□ -0.58
VPS11-207ENST00000620429 TMCO1Q9UM00 188 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 MAP3K15Q6ZN16 1313 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 TEX33O43247 280 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 ATP2C2O75185 946 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 ATP2A2P16615 1042 aaKnown RBP11.4□□□□□ -0.58
VPS11-207ENST00000620429 C2orf54Q08AI8 447 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 SCARF1Q14162 830 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 POSTNQ15063 836 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 Q4G0T1 1027 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 PI16Q6UXB8 463 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 SESTD1Q86VW0 696 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 LMNTD2Q8IXW0 634 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 LRRC1Q9BTT6 524 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 TAF1DQ9H5J8 278 aaPredicted RBP11.4□□□□□ -0.58
VPS11-207ENST00000620429 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.4□□□□□ -0.58
VPS11-207ENST00000620429 GUCA1BQ9UMX6 200 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 ANGEL1Q9UNK9 670 aaKnown RBP11.4□□□□□ -0.58
VPS11-207ENST00000620429 LRRC42Q9Y546 428 aa11.4□□□□□ -0.58
VPS11-207ENST00000620429 EVI5O60447 810 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 GYPCP04921 128 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 PCCAP05165 728 aaPredicted RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 ZFYP08048 801 aaPredicted RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 DESP17661 470 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 EIF4BP23588 611 aaKnown RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 MDM2Q00987 491 aaPredicted RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 MAP3K12Q12852 859 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 GIGYF2Q6Y7W6 1299 aaKnown RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 NLRP10Q86W26 655 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 MICU3Q86XE3 530 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 CCDC155Q8N6L0 562 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 GBP7Q8N8V2 638 aaPredicted RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 SMCR8Q8TEV9 937 aaPredicted RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 AIDAQ96BJ3 306 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 IFT43Q96FT9 208 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 PUS7LQ9H0K6 701 aaKnown RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 DMAP1Q9NPF5 467 aaPredicted RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 GALNT8Q9NY28 637 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 STIM2Q9P246 746 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 CEP126Q9P2H0 1117 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 DENND2AQ9ULE3 1009 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 GOLGA6L10A0A0M3HER8 536 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 POLR2DO15514 142 aaKnown RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 PAX3P23760 479 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 FXR1P51114 621 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS11-207ENST00000620429 GRAMD1CQ8IYS0 662 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 ZBTB38Q8NAP3 1195 aaPredicted RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 PROCA1Q8NCQ7 364 aaPredicted RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 HDAC7Q8WUI4 952 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 LZICQ8WZA0 190 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 CCDC43Q96MW1 224 aaKnown RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 TSPYL2Q9H2G4 693 aaPredicted RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 GREM2Q9H772 168 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS11-207ENST00000620429 AATFQ9NY61 560 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS11-207ENST00000620429 SERTAD1Q9UHV2 236 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 REXO2Q9Y3B8 237 aaKnown RBP11.39□□□□□ -0.59
VPS11-207ENST00000620429 NUB1Q9Y5A7 615 aa11.39□□□□□ -0.59
VPS11-207ENST00000620429 IARSP41252 1262 aaKnown RBP11.38□□□□□ -0.59
VPS11-207ENST00000620429 GJA8P48165 433 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 ENOX2Q16206 610 aaKnown RBP11.38□□□□□ -0.59
VPS11-207ENST00000620429 ERICH1Q86X53 443 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 STK11IPQ8N1F8 1099 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 APPBP2Q92624 585 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 KIFAP3Q92845 792 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 SLF1Q9BQI6 1058 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 SYT15Q9BQS2 421 aa11.38□□□□□ -0.59
VPS11-207ENST00000620429 TMBIM4Q9HC24 238 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms