RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 FTOQ9C0B1 505 aaKnown RBP eCLIP9.13□□□□□ -0.95
CPNE3-209ENST00000620393 PORCNQ9H237 461 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 EFCC1Q9HA90 598 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 GDPD2Q9HCC8 539 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 CEP131Q9UPN4 1083 aa9.13□□□□□ -0.95
CPNE3-209ENST00000620393 MORC2Q9Y6X9 1032 aaPredicted RBP9.13□□□□□ -0.95
CPNE3-209ENST00000620393 PFASO15067 1338 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 RPTORQ8N122 1335 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 DNAJC25-GNG10A0A024R161 153 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 SPTLC2O15270 562 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 FIBPO43427 364 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 CCNT1O60563 726 aaKnown RBP9.12□□□□□ -0.95
CPNE3-209ENST00000620393 PPP6R2O75170 966 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 PRPF40AO75400 957 aaKnown RBP9.12□□□□□ -0.95
CPNE3-209ENST00000620393 FCER1AP12319 257 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 GCFC2P16383 781 aaKnown RBP9.12□□□□□ -0.95
CPNE3-209ENST00000620393 MAPK4P31152 587 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 MCM7P33993 719 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 PTGDRQ13258 359 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 CRHR2Q13324 411 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 KCTD2Q14681 263 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 NFKBIBQ15653 356 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 ARHGEF16Q5VV41 709 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 XRRA1Q6P2D8 792 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 SLC30A10Q6XR72 485 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 ABRAQ8N0Z2 381 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 FAM133AQ8N9E0 248 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 DNERQ8NFT8 737 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 KCNG4Q8TDN1 519 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 MBOAT7Q96N66 472 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 PURBQ96QR8 312 aaKnown RBP9.12□□□□□ -0.95
CPNE3-209ENST00000620393 MMP19Q99542 508 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 TMEM121BQ9BXQ6 578 aaPredicted RBP9.12□□□□□ -0.95
CPNE3-209ENST00000620393 CFHR5Q9BXR6 569 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 PXMP2Q9NR77 195 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 LMBRD1Q9NUN5 540 aa9.12□□□□□ -0.95
CPNE3-209ENST00000620393 ELP1O95163 1332 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 SOWAHBA6NEL2 793 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 TDP2O95551 362 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 NR3C2P08235 984 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 HSPA6P17066 643 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 PTPREP23469 700 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 ZNF76P36508 570 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 C1QTNF8P60827 252 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 Q4G0T1 1027 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 WDR78Q5VTH9 848 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 PLEKHH3Q7Z736 793 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 VSIG10LQ86VR7 867 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 JMYQ8N9B5 988 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 IWS1Q96ST2 819 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 PDCD2LQ9BRP1 358 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 RNF186Q9NXI6 227 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 ADD3Q9UEY8 706 aaKnown RBP9.11□□□□□ -0.95
CPNE3-209ENST00000620393 PCDHA7Q9UN72 937 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 LOC285556D6RIA3 1793 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 RLFQ13129 1914 aa9.11□□□□□ -0.95
CPNE3-209ENST00000620393 FRMPD4Q14CM0 1322 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 SLC15A5A6NIM6 579 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 DDX11L8A8MPP1 907 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 B4DLN1 442 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 FAM86B1E9PN63 330 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 MEIS1O00470 390 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 LAD1O00515 517 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 FAM86B2P0C5J1 330 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 EIF2AK2P19525 551 aaKnown RBP9.1□□□□□ -0.95
CPNE3-209ENST00000620393 PTMSP20962 102 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 MARCKSP29966 332 aaPredicted RBP9.1□□□□□ -0.95
CPNE3-209ENST00000620393 PRPHP41219 470 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 ME1P48163 572 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 UBXN2AP68543 259 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 MRPS9P82933 396 aaKnown RBP9.1□□□□□ -0.95
CPNE3-209ENST00000620393 ATP2C1P98194 919 aaPredicted RBP9.1□□□□□ -0.95
CPNE3-209ENST00000620393 CNTN2Q02246 1040 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 PGM5Q15124 567 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 CEP55Q53EZ4 464 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 AXDND1Q5T1B0 1012 aaPredicted RBP9.1□□□□□ -0.95
CPNE3-209ENST00000620393 PCNX4Q63HM2 1172 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 ARL6IP4Q66PJ3 421 aaKnown RBP9.1□□□□□ -0.95
CPNE3-209ENST00000620393 ADALQ6DHV7 355 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 NIPA1Q7RTP0 329 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 GPR142Q7Z601 462 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 KRI1Q8N9T8 703 aaKnown RBP9.1□□□□□ -0.95
CPNE3-209ENST00000620393 CYP2W1Q8TAV3 490 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 FERMT2Q96AC1 680 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 MTMR9Q96QG7 549 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 MXRA8Q9BRK3 442 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 TMEM60Q9H2L4 133 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 DDX25Q9UHL0 483 aaKnown RBP9.1□□□□□ -0.95
CPNE3-209ENST00000620393 DIS3Q9Y2L1 958 aaKnown RBP9.1□□□□□ -0.95
CPNE3-209ENST00000620393 SRPRBQ9Y5M8 271 aaKnown RBP9.1□□□□□ -0.95
CPNE3-209ENST00000620393 UBIAD1Q9Y5Z9 338 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 IVNS1ABPQ9Y6Y0 642 aa9.1□□□□□ -0.95
CPNE3-209ENST00000620393 PTPRFP10586 1907 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 IGLV3-22A0A075B6J6 115 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 LOC102724159A0A0B4J2E5 919 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 GOLGA6L4A6NEF3 574 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 TBX3O15119 743 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 MAFGO15525 162 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 SLC37A4O43826 429 aa9.09□□□□□ -0.95
CPNE3-209ENST00000620393 NEMFO60524 1076 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms