RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 GRM4Q14833 912 aa17.77■□□□□ 0.44
DKC1-213ENST00000620277 ECM1Q16610 540 aa17.77■□□□□ 0.44
DKC1-213ENST00000620277 TTC31Q49AM3 519 aaPredicted RBP17.77■□□□□ 0.44
DKC1-213ENST00000620277 TTBK2Q6IQ55 1244 aa17.77■□□□□ 0.44
DKC1-213ENST00000620277 FAM133AQ8N9E0 248 aa17.77■□□□□ 0.44
DKC1-213ENST00000620277 OR2W6PQ8NHA6 318 aa17.77■□□□□ 0.44
DKC1-213ENST00000620277 HYOU1Q9Y4L1 999 aa17.77■□□□□ 0.44
DKC1-213ENST00000620277 FLT1P17948 1338 aa17.77■□□□□ 0.44
DKC1-213ENST00000620277 FAM196BA6NMK8 535 aa17.77■□□□□ 0.43
DKC1-213ENST00000620277 E9PMD0 336 aa17.77■□□□□ 0.43
DKC1-213ENST00000620277 RIMBP2O15034 1052 aa17.77■□□□□ 0.43
DKC1-213ENST00000620277 ATP2C2O75185 946 aa17.77■□□□□ 0.43
DKC1-213ENST00000620277 CDK8P49336 464 aa17.77■□□□□ 0.43
DKC1-213ENST00000620277 GRB10Q13322 594 aa17.77■□□□□ 0.43
DKC1-213ENST00000620277 FBXW10Q5XX13 1052 aa17.77■□□□□ 0.43
DKC1-213ENST00000620277 DDX42Q86XP3 938 aaKnown RBP eCLIP17.77■□□□□ 0.43
DKC1-213ENST00000620277 PYM1Q9BRP8 204 aaKnown RBP17.77■□□□□ 0.43
DKC1-213ENST00000620277 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.77■□□□□ 0.439e-7■■■■■ 35.8
DKC1-213ENST00000620277 MEIS1O00470 390 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 PALMO75781 387 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 GUCY1A3Q02108 690 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 EHBP1Q8NDI1 1231 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 LSM14BQ9BX40 385 aaKnown RBP17.76■□□□□ 0.43
DKC1-213ENST00000620277 CAPS2Q9BXY5 557 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 CCSER1Q9C0I3 900 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 KRT18P05783 430 aaKnown RBP17.76■□□□□ 0.43
DKC1-213ENST00000620277 KCNB1Q14721 858 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 MEA1Q16626 185 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 CNNM4Q6P4Q7 775 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 MAATS1Q7Z4T9 603 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 DGKHQ86XP1 1220 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 LARP4BQ92615 738 aaKnown RBP17.76■□□□□ 0.43
DKC1-213ENST00000620277 SH2D4AQ9H788 454 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 JRKLQ9Y4A0 524 aa17.76■□□□□ 0.43
DKC1-213ENST00000620277 DDX60Q8IY21 1712 aaKnown RBP17.76■□□□□ 0.43
DKC1-213ENST00000620277 PARP4Q9UKK3 1724 aaKnown RBP17.76■□□□□ 0.43
DKC1-213ENST00000620277 STAT3P40763 770 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 EPS15P42566 896 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 TCERG1LQ5VWI1 586 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 TRIM58Q8NG06 486 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 ALS2CR12Q96Q35 445 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 AP1M1Q9BXS5 423 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 TRIM31Q9BZY9 425 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 BLOC1S4Q9NUP1 217 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 TMCO5BA8MYB1 307 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 KCTD1Q719H9 257 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 NOC3LQ8WTT2 800 aaKnown RBP17.75■□□□□ 0.43
DKC1-213ENST00000620277 MXD3Q9BW11 206 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 IKZF4Q9H2S9 585 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 ZC3H4Q9UPT8 1303 aaKnown RBP17.75■□□□□ 0.43
DKC1-213ENST00000620277 HEXIM1O94992 359 aaKnown RBP17.75■□□□□ 0.43
DKC1-213ENST00000620277 FGRP09769 529 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 SEC24CP53992 1094 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 NAA35Q5VZE5 725 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 FAM114A1Q8IWE2 563 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 NUP58Q9BVL2 599 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 FAM184BQ9ULE4 1060 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 DUOX1Q9NRD9 1551 aa17.75■□□□□ 0.43
DKC1-213ENST00000620277 PPFIA4O75335 1185 aa17.74■□□□□ 0.43
DKC1-213ENST00000620277 KLRC1P26715 233 aa17.74■□□□□ 0.43
DKC1-213ENST00000620277 AMPD3Q01432 767 aa17.74■□□□□ 0.43
DKC1-213ENST00000620277 KIAA0753Q2KHM9 967 aa17.74■□□□□ 0.43
DKC1-213ENST00000620277 ZIM3Q96PE6 472 aa17.74■□□□□ 0.43
DKC1-213ENST00000620277 PNMA5Q96PV4 448 aa17.74■□□□□ 0.43
DKC1-213ENST00000620277 M0R2N6 131 aa17.74■□□□□ 0.43
DKC1-213ENST00000620277 LLGL1Q15334 1064 aa17.74■□□□□ 0.43
DKC1-213ENST00000620277 TLR10Q9BXR5 811 aa17.74■□□□□ 0.43
DKC1-213ENST00000620277 PLAGL2Q9UPG8 496 aa17.74■□□□□ 0.43
DKC1-213ENST00000620277 USP17L15C9J2P7 530 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 USP17L13C9JLJ4 530 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 USP17L11C9JVI0 530 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 USP17L18D6R9N7 530 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 USP17L22D6RA61 530 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 USP17L17D6RBQ6 530 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 USP17L19D6RCP7 530 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 USP17L20D6RJB6 530 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 HSF2BPO75031 334 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 USP17L24Q0WX57 530 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 SF3B3Q15393 1217 aaKnown RBP17.73■□□□□ 0.43
DKC1-213ENST00000620277 TTMPQ5BVD1 217 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 HERC4Q5GLZ8 1057 aaPredicted RBP17.73■□□□□ 0.43
DKC1-213ENST00000620277 HAUS3Q68CZ6 603 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 USP17L6PQ6QN14 398 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 CCDC170Q8IYT3 715 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 NDUFAB1O14561 156 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 BAG3O95817 575 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 GNAQP50148 359 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 SHROOM1Q2M3G4 852 aaPredicted RBP17.73■□□□□ 0.43
DKC1-213ENST00000620277 RNF187Q5TA31 235 aaPredicted RBP17.73■□□□□ 0.43
DKC1-213ENST00000620277 KRT79Q5XKE5 535 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 KIAA1024Q9UPX6 916 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 EBAG9O00559 213 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 DCAF17Q5H9S7 520 aaPredicted RBP17.73■□□□□ 0.43
DKC1-213ENST00000620277 STIM2Q9P246 746 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 SIK3Q9Y2K2 1263 aa17.73■□□□□ 0.43
DKC1-213ENST00000620277 PCNTO95613 3336 aa17.72■□□□□ 0.43
DKC1-213ENST00000620277 PALM3A6NDB9 673 aaPredicted RBP17.72■□□□□ 0.43
DKC1-213ENST00000620277 SFI1A8K8P3 1242 aa17.72■□□□□ 0.43
DKC1-213ENST00000620277 GNA11P29992 359 aa17.72■□□□□ 0.43
DKC1-213ENST00000620277 NNTQ13423 1086 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms