RNA–Protein interactions for RNA: ENST00000619976.1

SYNRG-227, Transcript of synergin gamma, human

TSL 2

Gene SYNRG, Length 1,375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-227	ENST00000619976	PPP4R2	Q9NY27	417 aa		32.09	■■■□□ 2.73
SYNRG-227	ENST00000619976	SCN10A	Q9Y5Y9	1956 aa		32.09	■■■□□ 2.73
SYNRG-227	ENST00000619976	HMGB1	P09429	215 aa	Known RBP	32.08	■■■□□ 2.73
SYNRG-227	ENST00000619976	HSPA4	P34932	840 aa		32.08	■■■□□ 2.73
SYNRG-227	ENST00000619976	ARHGAP1	Q07960	439 aa		32.08	■■■□□ 2.73
SYNRG-227	ENST00000619976	CCDC82	Q8N4S0	544 aa		32.08	■■■□□ 2.73
SYNRG-227	ENST00000619976	DDX41	Q9UJV9	622 aa	Known RBP	32.08	■■■□□ 2.73
SYNRG-227	ENST00000619976	MRVI1	Q9Y6F6	885 aa		32.08	■■■□□ 2.73
SYNRG-227	ENST00000619976	REC8	O95072	547 aa		32.07	■■■□□ 2.73
SYNRG-227	ENST00000619976	CCND2	P30279	289 aa		32.07	■■■□□ 2.73
SYNRG-227	ENST00000619976	GPR153	Q6NV75	609 aa		32.07	■■■□□ 2.73
SYNRG-227	ENST00000619976	AFG1L	Q8WV93	481 aa		32.07	■■■□□ 2.73
SYNRG-227	ENST00000619976	BRPF3	Q9ULD4	1205 aa		32.07	■■■□□ 2.73
SYNRG-227	ENST00000619976	MYH7B	A7E2Y1	1941 aa		32.07	■■■□□ 2.72
SYNRG-227	ENST00000619976	RGS20	O76081	388 aa		32.07	■■■□□ 2.72
SYNRG-227	ENST00000619976	EPHB4	P54760	987 aa		32.07	■■■□□ 2.72
SYNRG-227	ENST00000619976	ERICH6B	Q5W0A0	696 aa		32.07	■■■□□ 2.72
SYNRG-227	ENST00000619976	MFSD5	Q6N075	450 aa		32.07	■■■□□ 2.72
SYNRG-227	ENST00000619976	TRPV6	Q9H1D0	765 aa		32.07	■■■□□ 2.72
SYNRG-227	ENST00000619976	B4GALT4	O60513	344 aa		32.06	■■■□□ 2.72
SYNRG-227	ENST00000619976	PPP1R12C	Q9BZL4	782 aa		32.06	■■■□□ 2.72
SYNRG-227	ENST00000619976	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	32.06	■■■□□ 2.72
SYNRG-227	ENST00000619976	RBM28	Q9NW13	759 aa	Known RBP	32.06	■■■□□ 2.72
SYNRG-227	ENST00000619976	SNX14	Q9Y5W7	946 aa		32.06	■■■□□ 2.72
SYNRG-227	ENST00000619976	hCG_1642624	A0A1W2PR95	340 aa		32.05	■■■□□ 2.72
SYNRG-227	ENST00000619976	ZBTB43	O43298	467 aa		32.05	■■■□□ 2.72
SYNRG-227	ENST00000619976	CUL5	Q93034	780 aa		32.05	■■■□□ 2.72
SYNRG-227	ENST00000619976	FRMPD4	Q14CM0	1322 aa		32.04	■■■□□ 2.72
SYNRG-227	ENST00000619976	MMP3	P08254	477 aa		32.04	■■■□□ 2.72
SYNRG-227	ENST00000619976	CPA1	P15085	419 aa		32.04	■■■□□ 2.72
SYNRG-227	ENST00000619976	NBPF20	Q3BBV1	942 aa		32.04	■■■□□ 2.72
SYNRG-227	ENST00000619976	KCNV1	Q6PIU1	500 aa		32.04	■■■□□ 2.72
SYNRG-227	ENST00000619976	USP17L6P	Q6QN14	398 aa		32.04	■■■□□ 2.72
SYNRG-227	ENST00000619976	SMARCC2	Q8TAQ2	1214 aa		32.04	■■■□□ 2.72
SYNRG-227	ENST00000619976	ZFP91	Q96JP5	570 aa	Predicted RBP	32.04	■■■□□ 2.72
SYNRG-227	ENST00000619976	JAKMIP1	Q96N16	626 aa	Known RBP	32.04	■■■□□ 2.72
SYNRG-227	ENST00000619976	PIK3CD	O00329	1044 aa		32.03	■■■□□ 2.72
SYNRG-227	ENST00000619976	MEIS2	O14770	477 aa		32.03	■■■□□ 2.72
SYNRG-227	ENST00000619976	RTN1	Q16799	776 aa		32.03	■■■□□ 2.72
SYNRG-227	ENST00000619976	EMID1	Q96A84	441 aa	Predicted RBP	32.03	■■■□□ 2.72
SYNRG-227	ENST00000619976	HIPK3	Q9H422	1215 aa		32.03	■■■□□ 2.72
SYNRG-227	ENST00000619976	KLF18	A0A0U1RQI7	1052 aa		32.02	■■■□□ 2.72
SYNRG-227	ENST00000619976	CYP2C18	P33260	490 aa		32.02	■■■□□ 2.72
SYNRG-227	ENST00000619976	FGD1	P98174	961 aa		32.02	■■■□□ 2.72
SYNRG-227	ENST00000619976	LAMC2	Q13753	1193 aa		32.02	■■■□□ 2.72
SYNRG-227	ENST00000619976	DHX37	Q8IY37	1157 aa	Known RBP	32.02	■■■□□ 2.72
SYNRG-227	ENST00000619976	TMEM199	Q8N511	208 aa		32.02	■■■□□ 2.72
SYNRG-227	ENST00000619976	PPIG	Q13427	754 aa	Known RBP eCLIP	32.01	■■■□□ 2.71	2e-6	■□□□□ 9.5
SYNRG-227	ENST00000619976	FAM47C	Q5HY64	1035 aa		32.01	■■■□□ 2.71
SYNRG-227	ENST00000619976	NFRKB	Q6P4R8	1299 aa		32.01	■■■□□ 2.71
SYNRG-227	ENST00000619976	BLOC1S2	Q6QNY1	142 aa		32.01	■■■□□ 2.71
SYNRG-227	ENST00000619976	PSTPIP2	Q9H939	334 aa		32.01	■■■□□ 2.71
SYNRG-227	ENST00000619976	TRMT13	Q9NUP7	481 aa	Known RBP	32.01	■■■□□ 2.71
SYNRG-227	ENST00000619976	CNTNAP5	Q8WYK1	1306 aa		32.01	■■■□□ 2.71
SYNRG-227	ENST00000619976	TGFB3	P10600	412 aa		32	■■■□□ 2.71
SYNRG-227	ENST00000619976	CSF2RA	P15509	400 aa		32	■■■□□ 2.71
SYNRG-227	ENST00000619976	CAST	P20810	708 aa	Known RBP	32	■■■□□ 2.71
SYNRG-227	ENST00000619976	DGKD	Q16760	1214 aa		32	■■■□□ 2.71
SYNRG-227	ENST00000619976	PPP1R13L	Q8WUF5	828 aa		32	■■■□□ 2.71
SYNRG-227	ENST00000619976	RNPC3	Q96LT9	517 aa	Known RBP	32	■■■□□ 2.71
SYNRG-227	ENST00000619976	NOC4L	Q9BVI4	516 aa	Known RBP	32	■■■□□ 2.71
SYNRG-227	ENST00000619976	GOLGA8A	A7E2F4	631 aa		31.99	■■■□□ 2.71
SYNRG-227	ENST00000619976	GOLGA8B	A8MQT2	603 aa		31.99	■■■□□ 2.71
SYNRG-227	ENST00000619976	STAM2	O75886	525 aa		31.99	■■■□□ 2.71
SYNRG-227	ENST00000619976	CENPB	P07199	599 aa	Predicted RBP	31.99	■■■□□ 2.71
SYNRG-227	ENST00000619976	SUPT20HL2	P0C7V6	817 aa		31.99	■■■□□ 2.71
SYNRG-227	ENST00000619976	MRPS9	P82933	396 aa	Known RBP	31.99	■■■□□ 2.71
SYNRG-227	ENST00000619976		Q6ZUG5	572 aa		31.99	■■■□□ 2.71
SYNRG-227	ENST00000619976	HEATR3	Q7Z4Q2	680 aa		31.99	■■■□□ 2.71
SYNRG-227	ENST00000619976	PPTC7	Q8NI37	304 aa		31.99	■■■□□ 2.71
SYNRG-227	ENST00000619976	NAP1L2	Q9ULW6	460 aa	Predicted RBP	31.99	■■■□□ 2.71
SYNRG-227	ENST00000619976	UMODL1	Q5DID0	1318 aa		31.99	■■■□□ 2.71
SYNRG-227	ENST00000619976	RCAN1	P53805	252 aa		31.98	■■■□□ 2.71
SYNRG-227	ENST00000619976	CHMP4BP1	P59074	171 aa		31.98	■■■□□ 2.71
SYNRG-227	ENST00000619976	FUT2	Q10981	343 aa		31.98	■■■□□ 2.71
SYNRG-227	ENST00000619976	CELF3	Q5SZQ8	465 aa	Known RBP	31.98	■■■□□ 2.71
SYNRG-227	ENST00000619976	MYSM1	Q5VVJ2	828 aa		31.98	■■■□□ 2.71
SYNRG-227	ENST00000619976	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	31.98	■■■□□ 2.71
SYNRG-227	ENST00000619976	LAMA2	P24043	3122 aa	Known RBP	31.98	■■■□□ 2.71
SYNRG-227	ENST00000619976	EPB41L2	O43491	1005 aa	Known RBP	31.97	■■■□□ 2.71
SYNRG-227	ENST00000619976	GGPS1	O95749	300 aa		31.97	■■■□□ 2.71
SYNRG-227	ENST00000619976	UBA1	P22314	1058 aa	Known RBP	31.97	■■■□□ 2.71
SYNRG-227	ENST00000619976	SP2	Q02086	613 aa		31.97	■■■□□ 2.71
SYNRG-227	ENST00000619976	PTPN11	Q06124	597 aa	Predicted RBP	31.97	■■■□□ 2.71
SYNRG-227	ENST00000619976	GNPTAB	Q3T906	1256 aa		31.97	■■■□□ 2.71
SYNRG-227	ENST00000619976	DEFB123	Q8N688	67 aa		31.97	■■■□□ 2.71
SYNRG-227	ENST00000619976	INPP4A	Q96PE3	977 aa	Predicted RBP	31.97	■■■□□ 2.71
SYNRG-227	ENST00000619976	FAM217B	Q9NTX9	383 aa	Predicted RBP	31.97	■■■□□ 2.71
SYNRG-227	ENST00000619976	SORBS3	O60504	671 aa		31.96	■■■□□ 2.71
SYNRG-227	ENST00000619976	CDC27	P30260	824 aa		31.96	■■■□□ 2.71
SYNRG-227	ENST00000619976	APOBR	Q0VD83	1088 aa		31.96	■■■□□ 2.71
SYNRG-227	ENST00000619976		Q7L0L9	218 aa		31.96	■■■□□ 2.71
SYNRG-227	ENST00000619976	C16orf59	Q7L2K0	433 aa		31.96	■■■□□ 2.71
SYNRG-227	ENST00000619976	KAT2B	Q92831	832 aa		31.96	■■■□□ 2.71
SYNRG-227	ENST00000619976	BRF1	Q92994	677 aa		31.96	■■■□□ 2.71
SYNRG-227	ENST00000619976	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	31.96	■■■□□ 2.71	2e-7	■■■■□ 21.8
SYNRG-227	ENST00000619976	CYP2C9	P11712	490 aa		31.95	■■■□□ 2.71
SYNRG-227	ENST00000619976	RPS6KB1	P23443	525 aa		31.95	■■■□□ 2.71
SYNRG-227	ENST00000619976	PSMA5	P28066	241 aa		31.95	■■■□□ 2.71
SYNRG-227	ENST00000619976	PCNX4	Q63HM2	1172 aa		31.95	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms