RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 NUP133Q8WUM0 1156 aa24.48■■□□□ 1.51
SGMS1-210ENST00000619438 A1CFQ9NQ94 594 aaKnown RBP24.48■■□□□ 1.51
SGMS1-210ENST00000619438 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.48■■□□□ 1.51
SGMS1-210ENST00000619438 DNAJC25-GNG10A0A024R161 153 aa24.47■■□□□ 1.51
SGMS1-210ENST00000619438 FAM237AA0A1B0GTK4 181 aa24.47■■□□□ 1.51
SGMS1-210ENST00000619438 AP5Z1O43299 807 aa24.47■■□□□ 1.51
SGMS1-210ENST00000619438 GNL2Q13823 731 aaKnown RBP24.47■■□□□ 1.51
SGMS1-210ENST00000619438 PTPAQ15257 358 aa24.47■■□□□ 1.51
SGMS1-210ENST00000619438 SAFBQ15424 915 aaKnown RBP eCLIP24.47■■□□□ 1.51
SGMS1-210ENST00000619438 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.47■■□□□ 1.516e-6■■■□□ 14.6
SGMS1-210ENST00000619438 MAP3K14Q99558 947 aa24.47■■□□□ 1.51
SGMS1-210ENST00000619438 CRISPLD2Q9H0B8 497 aa24.47■■□□□ 1.51
SGMS1-210ENST00000619438 FOXP1Q9H334 677 aaPredicted RBP24.47■■□□□ 1.51
SGMS1-210ENST00000619438 RBM28Q9NW13 759 aaKnown RBP24.47■■□□□ 1.51
SGMS1-210ENST00000619438 MAD2L2Q9UI95 211 aa24.47■■□□□ 1.51
SGMS1-210ENST00000619438 DDAH1O94760 285 aa24.46■■□□□ 1.51
SGMS1-210ENST00000619438 TAL1P17542 331 aaPredicted RBP24.46■■□□□ 1.51
SGMS1-210ENST00000619438 ZNF165P49910 485 aa24.46■■□□□ 1.51
SGMS1-210ENST00000619438 CDC37Q16543 378 aaPredicted RBP24.46■■□□□ 1.51
SGMS1-210ENST00000619438 USH1GQ495M9 461 aa24.46■■□□□ 1.51
SGMS1-210ENST00000619438 PFASO15067 1338 aa24.46■■□□□ 1.51
SGMS1-210ENST00000619438 PALM3A6NDB9 673 aaPredicted RBP24.46■■□□□ 1.51
SGMS1-210ENST00000619438 MSCO60682 206 aa24.46■■□□□ 1.51
SGMS1-210ENST00000619438 FARP2O94887 1054 aaPredicted RBP24.46■■□□□ 1.51
SGMS1-210ENST00000619438 NDUFA8P51970 172 aa24.46■■□□□ 1.51
SGMS1-210ENST00000619438 TROAPQ12815 778 aa24.46■■□□□ 1.51
SGMS1-210ENST00000619438 NOSTRINQ8IVI9 506 aa24.46■■□□□ 1.51
SGMS1-210ENST00000619438 IGHA2P01877 340 aa24.45■■□□□ 1.5
SGMS1-210ENST00000619438 TPM3P06753 285 aa24.45■■□□□ 1.5
SGMS1-210ENST00000619438 CYBAP13498 195 aa24.45■■□□□ 1.5
SGMS1-210ENST00000619438 CNTN2Q02246 1040 aa24.45■■□□□ 1.5
SGMS1-210ENST00000619438 GRM4Q14833 912 aa24.45■■□□□ 1.5
SGMS1-210ENST00000619438 LUZP1Q86V48 1076 aa24.45■■□□□ 1.5
SGMS1-210ENST00000619438 MSL3Q8N5Y2 521 aaKnown RBP24.45■■□□□ 1.5
SGMS1-210ENST00000619438 TRPV1Q8NER1 839 aa24.45■■□□□ 1.5
SGMS1-210ENST00000619438 TIGD1Q96MW7 591 aa24.45■■□□□ 1.5
SGMS1-210ENST00000619438 JMJD4Q9H9V9 463 aa24.45■■□□□ 1.5
SGMS1-210ENST00000619438 ANO10Q9NW15 660 aa24.45■■□□□ 1.5
SGMS1-210ENST00000619438 DDX20Q9UHI6 824 aaKnown RBP24.45■■□□□ 1.5
SGMS1-210ENST00000619438 A0A1B0GVL5 298 aa24.44■■□□□ 1.5
SGMS1-210ENST00000619438 FUT2Q10981 343 aa24.44■■□□□ 1.5
SGMS1-210ENST00000619438 LHX8Q68G74 356 aa24.44■■□□□ 1.5
SGMS1-210ENST00000619438 CTCFLQ8NI51 663 aaPredicted RBP24.44■■□□□ 1.5
SGMS1-210ENST00000619438 DNAJC25Q9H1X3 360 aa24.44■■□□□ 1.5
SGMS1-210ENST00000619438 CYP39A1Q9NYL5 469 aa24.44■■□□□ 1.5
SGMS1-210ENST00000619438 PLXNA1Q9UIW2 1896 aa24.44■■□□□ 1.5
SGMS1-210ENST00000619438 ZNF467Q7Z7K2 595 aaPredicted RBP24.43■■□□□ 1.5
SGMS1-210ENST00000619438 OGDHLQ9ULD0 1010 aa24.43■■□□□ 1.5
SGMS1-210ENST00000619438 MORC2Q9Y6X9 1032 aaPredicted RBP24.43■■□□□ 1.5
SGMS1-210ENST00000619438 NFIBO00712 420 aa24.43■■□□□ 1.5
SGMS1-210ENST00000619438 SEPT4O43236 478 aa24.43■■□□□ 1.5
SGMS1-210ENST00000619438 PRPF3O43395 683 aaKnown RBP24.43■■□□□ 1.5
SGMS1-210ENST00000619438 BAATQ14032 418 aaPredicted RBP24.43■■□□□ 1.5
SGMS1-210ENST00000619438 IQCB1Q15051 598 aa24.43■■□□□ 1.5
SGMS1-210ENST00000619438 QRICH1Q2TAL8 776 aa24.43■■□□□ 1.5
SGMS1-210ENST00000619438 MAMDC4Q6UXC1 1216 aa24.43■■□□□ 1.5
SGMS1-210ENST00000619438 FBXO11Q86XK2 927 aa24.43■■□□□ 1.5
SGMS1-210ENST00000619438 DIS3L2Q8IYB7 885 aaKnown RBP24.43■■□□□ 1.5
SGMS1-210ENST00000619438 ANKLE1Q8NAG6 615 aa24.43■■□□□ 1.5
SGMS1-210ENST00000619438 NRBP1Q9UHY1 535 aa24.43■■□□□ 1.5
SGMS1-210ENST00000619438 HPSEQ9Y251 543 aa24.43■■□□□ 1.5
SGMS1-210ENST00000619438 KIF5BP33176 963 aa24.42■■□□□ 1.5
SGMS1-210ENST00000619438 RILPL1Q5EBL4 403 aa24.42■■□□□ 1.5
SGMS1-210ENST00000619438 FAM133AQ8N9E0 248 aa24.42■■□□□ 1.5
SGMS1-210ENST00000619438 PAWRQ96IZ0 340 aaKnown RBP24.42■■□□□ 1.5
SGMS1-210ENST00000619438 SDF4Q9BRK5 362 aa24.42■■□□□ 1.5
SGMS1-210ENST00000619438 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.42■■□□□ 1.5
SGMS1-210ENST00000619438 SYNGAP1Q96PV0 1343 aa24.41■■□□□ 1.5
SGMS1-210ENST00000619438 CUTAO60888 179 aa24.41■■□□□ 1.5
SGMS1-210ENST00000619438 OFD1O75665 1012 aa24.41■■□□□ 1.5
SGMS1-210ENST00000619438 RNF207Q6ZRF8 634 aa24.41■■□□□ 1.5
SGMS1-210ENST00000619438 NECAB2Q7Z6G3 386 aa24.41■■□□□ 1.5
SGMS1-210ENST00000619438 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.41■■□□□ 1.5
SGMS1-210ENST00000619438 HOMER1Q86YM7 354 aa24.41■■□□□ 1.5
SGMS1-210ENST00000619438 GOLGA6L6A8MZA4 724 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 ZNF202O95125 648 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 MYCNP04198 464 aaPredicted RBP24.4■■□□□ 1.5
SGMS1-210ENST00000619438 PFKFB1P16118 471 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 XBP1P17861 261 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 CALML3P27482 149 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 SARM1Q6SZW1 724 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 CLEC4DQ8WXI8 215 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 AMNQ9BXJ7 453 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 KIAA1468Q9P260 1216 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 ZHX1Q9UKY1 873 aaPredicted RBP24.4■■□□□ 1.5
SGMS1-210ENST00000619438 MYH6P13533 1939 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 ABCB11O95342 1321 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 ASB14A6NK59 587 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 BTBD18B2RXH4 712 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 SNAI1O95863 264 aaPredicted RBP24.4■■□□□ 1.5
SGMS1-210ENST00000619438 AKAP17AQ02040 695 aaKnown RBP24.4■■□□□ 1.5
SGMS1-210ENST00000619438 RESP18Q5W5W9 173 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 UBE2Q1Q7Z7E8 422 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 DPF3Q92784 378 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 HTATIP2Q9BUP3 242 aa24.4■■□□□ 1.5
SGMS1-210ENST00000619438 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.4■■□□□ 1.5
SGMS1-210ENST00000619438 ADD3Q9UEY8 706 aaKnown RBP24.4■■□□□ 1.5
SGMS1-210ENST00000619438 MRPL11Q9Y3B7 192 aaKnown RBP24.4■■□□□ 1.5
SGMS1-210ENST00000619438 FRMPD3Q5JV73 1810 aa24.39■■□□□ 1.5
SGMS1-210ENST00000619438 SOWAHBA6NEL2 793 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms