RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 RXRAP19793 462 aa25.3■■□□□ 1.64
TRAF4-217ENST00000618771 PURAQ00577 322 aaKnown RBP25.3■■□□□ 1.64
TRAF4-217ENST00000618771 PLEKHA8P1O95397 391 aa25.29■■□□□ 1.64
TRAF4-217ENST00000618771 FOSL2P15408 326 aa25.29■■□□□ 1.64
TRAF4-217ENST00000618771 RASEFQ8IZ41 740 aa25.29■■□□□ 1.64
TRAF4-217ENST00000618771 PDCD2LQ9BRP1 358 aa25.29■■□□□ 1.64
TRAF4-217ENST00000618771 MTG1Q9BT17 334 aaPredicted RBP25.29■■□□□ 1.64
TRAF4-217ENST00000618771 SEC63Q9UGP8 760 aaKnown RBP25.29■■□□□ 1.64
TRAF4-217ENST00000618771 A6NJR5 290 aa25.28■■□□□ 1.64
TRAF4-217ENST00000618771 KPNA6O60684 536 aa25.28■■□□□ 1.64
TRAF4-217ENST00000618771 TSGA10IPQ3SY00 556 aa25.28■■□□□ 1.64
TRAF4-217ENST00000618771 SGMS1Q86VZ5 419 aa25.28■■□□□ 1.64
TRAF4-217ENST00000618771 FCHSD1Q86WN1 690 aa25.28■■□□□ 1.64
TRAF4-217ENST00000618771 RAB11FIP4Q86YS3 637 aa25.28■■□□□ 1.64
TRAF4-217ENST00000618771 PPP1R12CQ9BZL4 782 aa25.28■■□□□ 1.64
TRAF4-217ENST00000618771 GH1P01241 217 aa25.27■■□□□ 1.64
TRAF4-217ENST00000618771 MYCLP12524 364 aaPredicted RBP25.27■■□□□ 1.64
TRAF4-217ENST00000618771 KRT32Q14532 448 aa25.27■■□□□ 1.64
TRAF4-217ENST00000618771 PGM5Q15124 567 aa25.27■■□□□ 1.64
TRAF4-217ENST00000618771 LY6KQ17RY6 165 aa25.27■■□□□ 1.64
TRAF4-217ENST00000618771 MFSD5Q6N075 450 aa25.27■■□□□ 1.64
TRAF4-217ENST00000618771 SRBD1Q8N5C6 995 aaKnown RBP25.27■■□□□ 1.64
TRAF4-217ENST00000618771 B4GALT4O60513 344 aa25.26■■□□□ 1.63
TRAF4-217ENST00000618771 ARHGAP1Q07960 439 aa25.26■■□□□ 1.63
TRAF4-217ENST00000618771 ADCK5Q3MIX3 580 aa25.26■■□□□ 1.63
TRAF4-217ENST00000618771 DHX32Q7L7V1 743 aaKnown RBP25.26■■□□□ 1.63
TRAF4-217ENST00000618771 MICU3Q86XE3 530 aa25.26■■□□□ 1.63
TRAF4-217ENST00000618771 CMTR1Q8N1G2 835 aaKnown RBP25.26■■□□□ 1.63
TRAF4-217ENST00000618771 FANCBQ8NB91 859 aa25.26■■□□□ 1.63
TRAF4-217ENST00000618771 IL31RAQ8NI17 732 aa25.26■■□□□ 1.63
TRAF4-217ENST00000618771 AFG1LQ8WV93 481 aa25.26■■□□□ 1.63
TRAF4-217ENST00000618771 TCEANC2Q96MN5 208 aa25.26■■□□□ 1.63
TRAF4-217ENST00000618771 TRPV6Q9H1D0 765 aa25.26■■□□□ 1.63
TRAF4-217ENST00000618771 DDX41Q9UJV9 622 aaKnown RBP25.26■■□□□ 1.63
TRAF4-217ENST00000618771 MRVI1Q9Y6F6 885 aa25.26■■□□□ 1.63
TRAF4-217ENST00000618771 SPTBN5Q9NRC6 3674 aaKnown RBP25.25■■□□□ 1.63
TRAF4-217ENST00000618771 TMEM265A0A087WTH1 108 aa25.25■■□□□ 1.63
TRAF4-217ENST00000618771 EXOSC10Q01780 885 aaKnown RBP25.25■■□□□ 1.63
TRAF4-217ENST00000618771 SYNE3Q6ZMZ3 975 aa25.25■■□□□ 1.63
TRAF4-217ENST00000618771 VSIG10LQ86VR7 867 aa25.25■■□□□ 1.63
TRAF4-217ENST00000618771 ALDH8A1Q9H2A2 487 aaPredicted RBP25.25■■□□□ 1.63
TRAF4-217ENST00000618771 MMP3P08254 477 aa25.24■■□□□ 1.63
TRAF4-217ENST00000618771 CCND2P30279 289 aa25.24■■□□□ 1.63
TRAF4-217ENST00000618771 PPIGQ13427 754 aaKnown RBP eCLIP25.24■■□□□ 1.635e-10■■■□□ 15.3
TRAF4-217ENST00000618771 TMTC3Q6ZXV5 915 aa25.24■■□□□ 1.63
TRAF4-217ENST00000618771 TMEM199Q8N511 208 aa25.24■■□□□ 1.63
TRAF4-217ENST00000618771 HIPK3Q9H422 1215 aa25.24■■□□□ 1.63
TRAF4-217ENST00000618771 DOCK5Q9H7D0 1870 aa25.23■■□□□ 1.63
TRAF4-217ENST00000618771 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.23■■□□□ 1.63
TRAF4-217ENST00000618771 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.23■■□□□ 1.63
TRAF4-217ENST00000618771 RGS20O76081 388 aa25.23■■□□□ 1.63
TRAF4-217ENST00000618771 DNAJB2P25686 324 aa25.23■■□□□ 1.63
TRAF4-217ENST00000618771 CYP2C18P33260 490 aa25.23■■□□□ 1.63
TRAF4-217ENST00000618771 APOA5Q6Q788 366 aa25.23■■□□□ 1.63
TRAF4-217ENST00000618771 TTC28Q96AY4 2481 aa25.23■■□□□ 1.63
TRAF4-217ENST00000618771 FRMPD4Q14CM0 1322 aa25.22■■□□□ 1.63
TRAF4-217ENST00000618771 HMGB1P09429 215 aaKnown RBP25.22■■□□□ 1.63
TRAF4-217ENST00000618771 CSF2RAP15509 400 aa25.22■■□□□ 1.63
TRAF4-217ENST00000618771 GRIN2CQ14957 1233 aa25.22■■□□□ 1.63
TRAF4-217ENST00000618771 NBPF20Q3BBV1 942 aa25.22■■□□□ 1.63
TRAF4-217ENST00000618771 FAM47CQ5HY64 1035 aa25.22■■□□□ 1.63
TRAF4-217ENST00000618771 NFRKBQ6P4R8 1299 aa25.22■■□□□ 1.63
TRAF4-217ENST00000618771 KCNV1Q6PIU1 500 aa25.22■■□□□ 1.63
TRAF4-217ENST00000618771 CCDC82Q8N4S0 544 aa25.22■■□□□ 1.63
TRAF4-217ENST00000618771 SMARCC2Q8TAQ2 1214 aa25.22■■□□□ 1.63
TRAF4-217ENST00000618771 CUL5Q93034 780 aa25.22■■□□□ 1.63
TRAF4-217ENST00000618771 EMID1Q96A84 441 aaPredicted RBP25.22■■□□□ 1.63
TRAF4-217ENST00000618771 TRMT13Q9NUP7 481 aaKnown RBP25.22■■□□□ 1.63
TRAF4-217ENST00000618771 TRIP12Q14669 1992 aaPredicted RBP25.22■■□□□ 1.63
TRAF4-217ENST00000618771 UMODL1Q5DID0 1318 aa25.21■■□□□ 1.63
TRAF4-217ENST00000618771 HSPA4P34932 840 aa25.21■■□□□ 1.63
TRAF4-217ENST00000618771 KCNB2Q92953 911 aa25.21■■□□□ 1.63
TRAF4-217ENST00000618771 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.21■■□□□ 1.633e-8■■□□□ 13.4
TRAF4-217ENST00000618771 NOC4LQ9BVI4 516 aaKnown RBP25.21■■□□□ 1.63
TRAF4-217ENST00000618771 hCG_1642624A0A1W2PR95 340 aa25.2■■□□□ 1.62
TRAF4-217ENST00000618771 PIK3CDO00329 1044 aa25.2■■□□□ 1.62
TRAF4-217ENST00000618771 REC8O95072 547 aa25.2■■□□□ 1.62
TRAF4-217ENST00000618771 SUPT20HL2P0C7V6 817 aa25.2■■□□□ 1.62
TRAF4-217ENST00000618771 LAMC2Q13753 1193 aa25.2■■□□□ 1.62
TRAF4-217ENST00000618771 DGKDQ16760 1214 aa25.2■■□□□ 1.62
TRAF4-217ENST00000618771 USP17L6PQ6QN14 398 aa25.2■■□□□ 1.62
TRAF4-217ENST00000618771 DHX37Q8IY37 1157 aaKnown RBP25.2■■□□□ 1.62
TRAF4-217ENST00000618771 ZFP91Q96JP5 570 aaPredicted RBP25.2■■□□□ 1.62
TRAF4-217ENST00000618771 RBM28Q9NW13 759 aaKnown RBP25.2■■□□□ 1.62
TRAF4-217ENST00000618771 BRPF3Q9ULD4 1205 aa25.2■■□□□ 1.62
TRAF4-217ENST00000618771 TANC1Q9C0D5 1861 aa25.19■■□□□ 1.62
TRAF4-217ENST00000618771 SCN5AQ14524 2016 aa25.19■■□□□ 1.62
TRAF4-217ENST00000618771 MEIS2O14770 477 aa25.19■■□□□ 1.62
TRAF4-217ENST00000618771 ZBTB43O43298 467 aa25.19■■□□□ 1.62
TRAF4-217ENST00000618771 CASTP20810 708 aaKnown RBP25.19■■□□□ 1.62
TRAF4-217ENST00000618771 CHMP4BP1P59074 171 aa25.19■■□□□ 1.62
TRAF4-217ENST00000618771 RTN1Q16799 776 aa25.19■■□□□ 1.62
TRAF4-217ENST00000618771 PPTC7Q8NI37 304 aa25.19■■□□□ 1.62
TRAF4-217ENST00000618771 PPP1R13LQ8WUF5 828 aa25.19■■□□□ 1.62
TRAF4-217ENST00000618771 MYO9BQ13459 2157 aa25.19■■□□□ 1.62
TRAF4-217ENST00000618771 CNTNAP5Q8WYK1 1306 aa25.18■■□□□ 1.62
TRAF4-217ENST00000618771 TGFB3P10600 412 aa25.18■■□□□ 1.62
TRAF4-217ENST00000618771 CYP2C9P11712 490 aa25.18■■□□□ 1.62
TRAF4-217ENST00000618771 FGD1P98174 961 aa25.18■■□□□ 1.62
TRAF4-217ENST00000618771 PTPN11Q06124 597 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms