RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 PDCD2LQ9BRP1 358 aa25.53■■□□□ 1.68
SYNGR3-206ENST00000618464 MAP3K20Q9NYL2 800 aaKnown RBP25.53■■□□□ 1.68
SYNGR3-206ENST00000618464 SLC12A7Q9Y666 1083 aa25.53■■□□□ 1.68
SYNGR3-206ENST00000618464 KIAA1217Q5T5P2 1943 aa25.53■■□□□ 1.68
SYNGR3-206ENST00000618464 A6NJR5 290 aa25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 GH1P01241 217 aa25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 CYP2C18P33260 490 aa25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 GNAQP50148 359 aa25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 CHMP4BP1P59074 171 aa25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 FAM47CQ5HY64 1035 aa25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 RASEFQ8IZ41 740 aa25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 SRBD1Q8N5C6 995 aaKnown RBP25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 SAMD3Q8N6K7 520 aa25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 ZFP91Q96JP5 570 aaPredicted RBP25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 NEK1Q96PY6 1258 aa25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 HIPK3Q9H422 1215 aa25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 SEC63Q9UGP8 760 aaKnown RBP25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 MRVI1Q9Y6F6 885 aa25.52■■□□□ 1.68
SYNGR3-206ENST00000618464 CSF2RAP15509 400 aa25.51■■□□□ 1.67
SYNGR3-206ENST00000618464 ARHGAP1Q07960 439 aa25.51■■□□□ 1.67
SYNGR3-206ENST00000618464 PGM5Q15124 567 aa25.51■■□□□ 1.67
SYNGR3-206ENST00000618464 MICU3Q86XE3 530 aa25.51■■□□□ 1.67
SYNGR3-206ENST00000618464 LZTS2Q9BRK4 669 aa25.51■■□□□ 1.67
SYNGR3-206ENST00000618464 SEZ6LQ9BYH1 1024 aa25.51■■□□□ 1.67
SYNGR3-206ENST00000618464 ALDH8A1Q9H2A2 487 aaPredicted RBP25.51■■□□□ 1.67
SYNGR3-206ENST00000618464 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 KPNA6O60684 536 aa25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 CALM1P0DP23 149 aa25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 CALM2P0DP24 149 aa25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 CALM3P0DP25 149 aa25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 PPIGQ13427 754 aaKnown RBP eCLIP25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 NBPF20Q3BBV1 942 aa25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 ADCK5Q3MIX3 580 aa25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 UMODL1Q5DID0 1318 aa25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 TMEM240Q5SV17 173 aa25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 CCDC82Q8N4S0 544 aa25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 TMEM199Q8N511 208 aa25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 TRMT13Q9NUP7 481 aaKnown RBP25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 DDX41Q9UJV9 622 aaKnown RBP25.5■■□□□ 1.67
SYNGR3-206ENST00000618464 hCG_1642624A0A1W2PR95 340 aa25.49■■□□□ 1.67
SYNGR3-206ENST00000618464 SORBS3O60504 671 aa25.49■■□□□ 1.67
SYNGR3-206ENST00000618464 MMP3P08254 477 aa25.49■■□□□ 1.67
SYNGR3-206ENST00000618464 ACRP10323 421 aa25.49■■□□□ 1.67
SYNGR3-206ENST00000618464 MAFAQ8NHW3 353 aaPredicted RBP25.49■■□□□ 1.67
SYNGR3-206ENST00000618464 DNAJB2P25686 324 aa25.48■■□□□ 1.67
SYNGR3-206ENST00000618464 SMARCA1P28370 1054 aa25.48■■□□□ 1.67
SYNGR3-206ENST00000618464 CCND2P30279 289 aa25.48■■□□□ 1.67
SYNGR3-206ENST00000618464 CCL23P55773 120 aa25.48■■□□□ 1.67
SYNGR3-206ENST00000618464 VSIG10LQ86VR7 867 aa25.48■■□□□ 1.67
SYNGR3-206ENST00000618464 SGMS1Q86VZ5 419 aa25.48■■□□□ 1.67
SYNGR3-206ENST00000618464 NOC4LQ9BVI4 516 aaKnown RBP25.48■■□□□ 1.67
SYNGR3-206ENST00000618464 COL25A1Q9BXS0 654 aaPredicted RBP25.48■■□□□ 1.67
SYNGR3-206ENST00000618464 SCN10AQ9Y5Y9 1956 aa25.47■■□□□ 1.67
SYNGR3-206ENST00000618464 TMEM265A0A087WTH1 108 aa25.47■■□□□ 1.67
SYNGR3-206ENST00000618464 RGS20O76081 388 aa25.47■■□□□ 1.67
SYNGR3-206ENST00000618464 CENPBP07199 599 aaPredicted RBP25.47■■□□□ 1.67
SYNGR3-206ENST00000618464 CYP2C9P11712 490 aa25.47■■□□□ 1.67
SYNGR3-206ENST00000618464 EXOSC10Q01780 885 aaKnown RBP25.47■■□□□ 1.67
SYNGR3-206ENST00000618464 SYNE3Q6ZMZ3 975 aa25.47■■□□□ 1.67
SYNGR3-206ENST00000618464 ZNF365Q70YC5 407 aa25.47■■□□□ 1.67
SYNGR3-206ENST00000618464 DHX32Q7L7V1 743 aaKnown RBP25.47■■□□□ 1.67
SYNGR3-206ENST00000618464 FANCBQ8NB91 859 aa25.47■■□□□ 1.67
SYNGR3-206ENST00000618464 GRXCR1A8MXD5 290 aa25.46■■□□□ 1.67
SYNGR3-206ENST00000618464 FOSL2P15408 326 aa25.46■■□□□ 1.67
SYNGR3-206ENST00000618464 KRT32Q14532 448 aa25.46■■□□□ 1.67
SYNGR3-206ENST00000618464 GRIN2CQ14957 1233 aa25.46■■□□□ 1.67
SYNGR3-206ENST00000618464 TSGA10IPQ3SY00 556 aa25.46■■□□□ 1.67
SYNGR3-206ENST00000618464 RASIP1Q5U651 963 aa25.46■■□□□ 1.67
SYNGR3-206ENST00000618464 USP17L6PQ6QN14 398 aa25.46■■□□□ 1.67
SYNGR3-206ENST00000618464 TMTC3Q6ZXV5 915 aa25.46■■□□□ 1.67
SYNGR3-206ENST00000618464 DHX37Q8IY37 1157 aaKnown RBP25.46■■□□□ 1.67
SYNGR3-206ENST00000618464 SMARCC2Q8TAQ2 1214 aa25.46■■□□□ 1.67
SYNGR3-206ENST00000618464 SUPT20HL2P0C7V6 817 aa25.45■■□□□ 1.66
SYNGR3-206ENST00000618464 NFRKBQ6P4R8 1299 aa25.45■■□□□ 1.66
SYNGR3-206ENST00000618464 APOA5Q6Q788 366 aa25.45■■□□□ 1.66
SYNGR3-206ENST00000618464 GPKOWQ92917 476 aaPredicted RBP eCLIP25.45■■□□□ 1.66
SYNGR3-206ENST00000618464 CUL5Q93034 780 aa25.45■■□□□ 1.66
SYNGR3-206ENST00000618464 WNT8AQ9H1J5 351 aa25.45■■□□□ 1.66
SYNGR3-206ENST00000618464 BRPF3Q9ULD4 1205 aa25.45■■□□□ 1.66
SYNGR3-206ENST00000618464 CPA1P15085 419 aa25.44■■□□□ 1.66
SYNGR3-206ENST00000618464 CASTP20810 708 aaKnown RBP25.44■■□□□ 1.66
SYNGR3-206ENST00000618464 PBX2P40425 430 aa25.44■■□□□ 1.66
SYNGR3-206ENST00000618464 LAMC2Q13753 1193 aa25.44■■□□□ 1.66
SYNGR3-206ENST00000618464 EMID1Q96A84 441 aaPredicted RBP25.44■■□□□ 1.66
SYNGR3-206ENST00000618464 IL23AQ9NPF7 189 aa25.44■■□□□ 1.66
SYNGR3-206ENST00000618464 ZNF286BP0CG31 522 aa25.43■■□□□ 1.66
SYNGR3-206ENST00000618464 DGKDQ16760 1214 aa25.43■■□□□ 1.66
SYNGR3-206ENST00000618464 TIFAQ96CG3 184 aa25.43■■□□□ 1.66
SYNGR3-206ENST00000618464 SCLYQ96I15 445 aa25.43■■□□□ 1.66
SYNGR3-206ENST00000618464 ZNF576Q9H609 170 aa25.43■■□□□ 1.66
SYNGR3-206ENST00000618464 NAP1L2Q9ULW6 460 aaPredicted RBP25.43■■□□□ 1.66
SYNGR3-206ENST00000618464 FRMPD4Q14CM0 1322 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 MYH7BA7E2Y1 1941 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 MEIS2O14770 477 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 ZBTB43O43298 467 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 GGPS1O95749 300 aa25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 UBA1P22314 1058 aaKnown RBP25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 MRPS9P82933 396 aaKnown RBP25.42■■□□□ 1.66
SYNGR3-206ENST00000618464 SP2Q02086 613 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms