RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ZNF449Q6P9G9 518 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 CCDC127Q96BQ5 260 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 SDCCAG3Q96C92 435 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 TRIM11Q96F44 468 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 CENPKQ9BS16 269 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 DRC3Q9H069 523 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 TBK1Q9UHD2 729 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 TTC4O95801 387 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 KCNA6P17658 529 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 PHEXP78562 749 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 CNBD1Q8NA66 436 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 PI4K2BQ8TCG2 481 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 ZNF653Q96CK0 615 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 HAUS8Q9BT25 410 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 CTTNBP2Q8WZ74 1663 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 CIAO1O76071 339 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 KRT3P12035 628 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 RESP18Q5W5W9 173 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 TTLL7Q6ZT98 887 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 GDAP1Q8TB36 358 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 TBC1D22AQ8WUA7 517 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 SPDL1Q96EA4 605 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 AP1M1Q9BXS5 423 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 MIS12Q9H081 205 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 ABHD10Q9NUJ1 306 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 TMOD4Q9NZQ9 345 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 PCDHB6Q9Y5E3 794 aa11.57□□□□□ -0.56
CLTCL1-209ENST00000617103 SH2B2O14492 632 aaPredicted RBP11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 DCTN3O75935 186 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 ATP5HO75947 161 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 MT-ND3P03897 115 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 GOLGA8HP0CJ92 632 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 CA4P22748 312 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 MAPK4P31152 587 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 PSMC2P35998 433 aaKnown RBP11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 SCYL2Q6P3W7 929 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 TAB3Q8N5C8 712 aaPredicted RBP11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 CXorf38Q8TB03 319 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 SLC24A3Q9HC58 644 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 TTLL3Q9Y4R7 772 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 EXOC1LA0A1B0GW35 172 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 TMEM232C9JQI7 657 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 TADA3O75528 432 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 SNX1Q13596 522 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 LRRC41Q15345 812 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 FMR1NBQ8N0W7 255 aaPredicted RBP11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 SCYL1Q96KG9 808 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 NT5C1BQ96P26 610 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 EFHD1Q9BUP0 239 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 PITPNM3Q9BZ71 974 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 MRFAP1Q9Y605 127 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 ADGRG1Q9Y653 693 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 SGK1O00141 431 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 PCCAP05165 728 aaPredicted RBP11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 ACTN3Q08043 901 aaPredicted RBP11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 FAM186BQ8IYM0 893 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 DEPTORQ8TB45 409 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 NSMCE1Q8WV22 266 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 PPWD1Q96BP3 646 aaKnown RBP11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 FGFR1OP2Q9NVK5 253 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 ADAMTS1Q9UHI8 967 aa11.56□□□□□ -0.56
CLTCL1-209ENST00000617103 H0YCG3 227 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 SRGAP2O75044 1071 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 CNGA1P29973 690 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 LIFRP42702 1097 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 ALKBH5Q6P6C2 394 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 NSMFQ6X4W1 530 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 ZBTB38Q8NAP3 1195 aaPredicted RBP11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 EPC1Q9H2F5 836 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 STOML1Q9UBI4 398 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 H7C0C1 242 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 DLATP10515 647 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 ATP5OP48047 213 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 USP14P54578 494 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 ODR4Q5SWX8 454 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 FAM102BQ5T8I3 360 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 NLRX1Q86UT6 975 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 MAP7D3Q8IWC1 876 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 CCDC117Q8IWD4 279 aaPredicted RBP11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 CPXCR1Q8N123 301 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 PROCA1Q8NCQ7 364 aaPredicted RBP11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 COG1Q8WTW3 980 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 M0R2C6 588 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 PDE8BO95263 885 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 PTPREP23469 700 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 LIG4P49917 911 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 MRPS25P82663 173 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 LRRC63Q05C16 580 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 PSMD2Q13200 908 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 ZYXQ15942 572 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 JADE1Q6IE81 842 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 TRIM50Q86XT4 487 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 ANKRD7Q92527 254 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 YIPF3Q9GZM5 350 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 PODXLO00592 558 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 TRPA1O75762 1119 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 GSTA1P08263 222 aa11.55□□□□□ -0.56
CLTCL1-209ENST00000617103 GSTA2P09210 222 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms