RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 KLHL40Q2TBA0 621 aa17.21■□□□□ 0.35
CBWD1-225ENST00000616944 C17orf99Q6UX52 265 aa17.21■□□□□ 0.35
CBWD1-225ENST00000616944 REM2Q8IYK8 340 aaPredicted RBP17.21■□□□□ 0.35
CBWD1-225ENST00000616944 ZNF579Q8NAF0 562 aaKnown RBP17.21■□□□□ 0.35
CBWD1-225ENST00000616944 DNERQ8NFT8 737 aa17.21■□□□□ 0.35
CBWD1-225ENST00000616944 CYP2W1Q8TAV3 490 aa17.21■□□□□ 0.35
CBWD1-225ENST00000616944 HAS1Q92839 578 aa17.21■□□□□ 0.35
CBWD1-225ENST00000616944 WDR81Q562E7 1941 aa17.2■□□□□ 0.34
CBWD1-225ENST00000616944 DOCK5Q9H7D0 1870 aa17.2■□□□□ 0.34
CBWD1-225ENST00000616944 ZSWIM8A7E2V4 1837 aa17.2■□□□□ 0.34
CBWD1-225ENST00000616944 MBD3O95983 291 aa17.2■□□□□ 0.34
CBWD1-225ENST00000616944 EIF2AK2P19525 551 aaKnown RBP17.2■□□□□ 0.34
CBWD1-225ENST00000616944 CNTN2Q02246 1040 aa17.2■□□□□ 0.34
CBWD1-225ENST00000616944 CRHR2Q13324 411 aa17.2■□□□□ 0.34
CBWD1-225ENST00000616944 CEP55Q53EZ4 464 aa17.2■□□□□ 0.34
CBWD1-225ENST00000616944 SHC4Q6S5L8 630 aa17.2■□□□□ 0.34
CBWD1-225ENST00000616944 ETNPPLQ8TBG4 499 aa17.2■□□□□ 0.34
CBWD1-225ENST00000616944 NSUN6Q8TEA1 469 aaKnown RBP17.2■□□□□ 0.34
CBWD1-225ENST00000616944 FGD4Q96M96 766 aa17.2■□□□□ 0.34
CBWD1-225ENST00000616944 CPA4Q9UI42 421 aa17.2■□□□□ 0.34
CBWD1-225ENST00000616944 FAM237AA0A1B0GTK4 181 aa17.19■□□□□ 0.34
CBWD1-225ENST00000616944 GOLGA6L4A6NEF3 574 aa17.19■□□□□ 0.34
CBWD1-225ENST00000616944 CA12O43570 354 aa17.19■□□□□ 0.34
CBWD1-225ENST00000616944 TRAK2O60296 914 aa17.19■□□□□ 0.34
CBWD1-225ENST00000616944 CMA1P23946 247 aa17.19■□□□□ 0.34
CBWD1-225ENST00000616944 CALCRLQ16602 461 aa17.19■□□□□ 0.34
CBWD1-225ENST00000616944 ARHGEF16Q5VV41 709 aa17.19■□□□□ 0.34
CBWD1-225ENST00000616944 RESP18Q5W5W9 173 aa17.19■□□□□ 0.34
CBWD1-225ENST00000616944 GOLPH3LQ9H4A5 285 aa17.19■□□□□ 0.34
CBWD1-225ENST00000616944 ZFYVE28Q9HCC9 887 aa17.19■□□□□ 0.34
CBWD1-225ENST00000616944 DDX49Q9Y6V7 483 aaKnown RBP17.19■□□□□ 0.34
CBWD1-225ENST00000616944 VWA3AA6NCI4 1184 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 SOWAHBA6NEL2 793 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 MEIS1O00470 390 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 TBX3O15119 743 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 ALDH1A1P00352 501 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 FCER1AP12319 257 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 ITGB5P18084 799 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 KCTD2Q14681 263 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 SKOR2Q2VWA4 1001 aaPredicted RBP17.18■□□□□ 0.34
CBWD1-225ENST00000616944 PRR16Q569H4 304 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 XRRA1Q6P2D8 792 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 NIPA1Q7RTP0 329 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 VSIG10LQ86VR7 867 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 ABRAQ8N0Z2 381 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 MRPS27Q92552 414 aaKnown RBP17.18■□□□□ 0.34
CBWD1-225ENST00000616944 MMP19Q99542 508 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 CSRNP2Q9H175 543 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 UBIAD1Q9Y5Z9 338 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 POTEB2H3BUK9 544 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 STRNO43815 780 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 NR3C2P08235 984 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 LIG1P18858 919 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 EDNRBP24530 442 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 ALDH5A1P51649 535 aaPredicted RBP17.18■□□□□ 0.34
CBWD1-225ENST00000616944 GPR142Q7Z601 462 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 CCAR1Q8IX12 1150 aaKnown RBP17.18■□□□□ 0.34
CBWD1-225ENST00000616944 IWS1Q96ST2 819 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 MXRA8Q9BRK3 442 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 HPSEQ9Y251 543 aa17.18■□□□□ 0.34
CBWD1-225ENST00000616944 MSH4O15457 936 aa17.17■□□□□ 0.34
CBWD1-225ENST00000616944 PGK2P07205 417 aa17.17■□□□□ 0.34
CBWD1-225ENST00000616944 MAPK4P31152 587 aa17.17■□□□□ 0.34
CBWD1-225ENST00000616944 MAP2K2P36507 400 aa17.17■□□□□ 0.34
CBWD1-225ENST00000616944 FXR2P51116 673 aaKnown RBP eCLIP17.17■□□□□ 0.34
CBWD1-225ENST00000616944 SETQ01105 290 aaPredicted RBP17.17■□□□□ 0.34
CBWD1-225ENST00000616944 GRB14Q14449 540 aa17.17■□□□□ 0.34
CBWD1-225ENST00000616944 WDR78Q5VTH9 848 aa17.17■□□□□ 0.34
CBWD1-225ENST00000616944 DTHD1Q6ZMT9 781 aa17.17■□□□□ 0.34
CBWD1-225ENST00000616944 IGSF22Q8N9C0 903 aa17.17■□□□□ 0.34
CBWD1-225ENST00000616944 FSIP1Q8NA03 581 aa17.17■□□□□ 0.34
CBWD1-225ENST00000616944 ENGASEQ8NFI3 743 aa17.17■□□□□ 0.34
CBWD1-225ENST00000616944 CCND2P30279 289 aa17.16■□□□□ 0.34
CBWD1-225ENST00000616944 ZNF76P36508 570 aa17.16■□□□□ 0.34
CBWD1-225ENST00000616944 LONP1P36776 959 aaKnown RBP17.16■□□□□ 0.34
CBWD1-225ENST00000616944 SNW1Q13573 536 aaKnown RBP17.16■□□□□ 0.34
CBWD1-225ENST00000616944 TPRNQ4KMQ1 711 aa17.16■□□□□ 0.34
CBWD1-225ENST00000616944 SPECC1Q5M775 1068 aa17.16■□□□□ 0.34
CBWD1-225ENST00000616944 USP49Q70CQ1 688 aa17.16■□□□□ 0.34
CBWD1-225ENST00000616944 ZFP91Q96JP5 570 aaPredicted RBP17.16■□□□□ 0.34
CBWD1-225ENST00000616944 INPP4AQ96PE3 977 aaPredicted RBP17.16■□□□□ 0.34
CBWD1-225ENST00000616944 CFHR5Q9BXR6 569 aa17.16■□□□□ 0.34
CBWD1-225ENST00000616944 ADD3Q9UEY8 706 aaKnown RBP17.16■□□□□ 0.34
CBWD1-225ENST00000616944 LOC102724159A0A0B4J2E5 919 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 A0A1B0GVL5 298 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 STAM2O75886 525 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 RGS20O76081 388 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 PFKFB1P16118 471 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 ADORA2AP29274 412 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 NDUFA8P51970 172 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 FAM160A1Q05DH4 1040 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 SPIRE1Q08AE8 756 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 PWP2Q15269 919 aaKnown RBP17.15■□□□□ 0.34
CBWD1-225ENST00000616944 PLA2G4DQ86XP0 818 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 SLFN12Q8IYM2 578 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 FMR1NBQ8N0W7 255 aaPredicted RBP17.15■□□□□ 0.34
CBWD1-225ENST00000616944 GJA10Q969M2 543 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 FAM20AQ96MK3 541 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 JADE2Q9NQC1 790 aa17.15■□□□□ 0.34
CBWD1-225ENST00000616944 CASP8AP2Q9UKL3 1982 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms