RNA–Protein interactions for RNA: ENST00000613942.2

CRNDE-212, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 2,601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-212ENST00000613942 USP17L6PQ6QN14 398 aa6.78□□□□□ -1.32
CRNDE-212ENST00000613942 BTNL9Q6UXG8 535 aa6.78□□□□□ -1.32
CRNDE-212ENST00000613942 SYT10Q6XYQ8 523 aa6.78□□□□□ -1.32
CRNDE-212ENST00000613942 MOB2Q70IA6 237 aa6.78□□□□□ -1.32
CRNDE-212ENST00000613942 KRT26Q7Z3Y9 468 aa6.78□□□□□ -1.32
CRNDE-212ENST00000613942 CREBRFQ8IUR6 639 aa6.78□□□□□ -1.32
CRNDE-212ENST00000613942 EGFL6Q8IUX8 553 aa6.78□□□□□ -1.32
CRNDE-212ENST00000613942 SULF1Q8IWU6 871 aa6.78□□□□□ -1.32
CRNDE-212ENST00000613942 SCYL3Q8IZE3 742 aa6.78□□□□□ -1.32
CRNDE-212ENST00000613942 REXO1Q8N1G1 1221 aaKnown RBP6.78□□□□□ -1.32
CRNDE-212ENST00000613942 CCDC12Q8WUD4 166 aaPredicted RBP6.78□□□□□ -1.32
CRNDE-212ENST00000613942 TIGD1Q96MW7 591 aa6.78□□□□□ -1.32
CRNDE-212ENST00000613942 ZNF215Q9UL58 517 aaPredicted RBP6.78□□□□□ -1.32
CRNDE-212ENST00000613942 A0A0U1RQJ8 604 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 PP2D1A8MPX8 630 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 EDIL3O43854 480 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 DPYDQ12882 1025 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 LETM2Q2VYF4 491 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 GALNT17Q6IS24 598 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 NYAP1Q6ZVC0 841 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 TBCKQ8TEA7 893 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 ATRIPQ8WXE1 791 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 L3MBTL3Q96JM7 780 aaPredicted RBP6.77□□□□□ -1.33
CRNDE-212ENST00000613942 PPP1R13BQ96KQ4 1090 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 P2RX7Q99572 595 aaKnown RBP6.77□□□□□ -1.33
CRNDE-212ENST00000613942 BPIFA3Q9BQP9 254 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 TMEM121BQ9BXQ6 578 aaPredicted RBP6.77□□□□□ -1.33
CRNDE-212ENST00000613942 TMEM60Q9H2L4 133 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 PSTPIP2Q9H939 334 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 EMILIN3Q9NT22 766 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 SYNPO2Q9UMS6 1093 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 SRPRBQ9Y5M8 271 aaKnown RBP6.77□□□□□ -1.33
CRNDE-212ENST00000613942 ZHX2Q9Y6X8 837 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 PITPNM2Q9BZ72 1349 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 FAM237AA0A1B0GTK4 181 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 ESYT2A0FGR8 921 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 SMTNL1A8MU46 457 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 OPLAHO14841 1288 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 TEX33O43247 280 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 GRIN3BO60391 1043 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 SUPT20HL1Q3ZLR7 823 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 FBXO11Q86XK2 927 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 C4orf32Q8N8J7 132 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 CCDC112Q8NEF3 446 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 TBC1D5Q92609 795 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 SMARCE1Q969G3 411 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 AMNQ9BXJ7 453 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 KRTAP3-2Q9BYR7 98 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 KIAA1683Q9H0B3 1180 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 SH2D4AQ9H788 454 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 PRDM16Q9HAZ2 1276 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 RIC8AQ9NPQ8 531 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 PICK1Q9NRD5 415 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 CEP131Q9UPN4 1083 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 PPP2R3BQ9Y5P8 575 aa6.77□□□□□ -1.33
CRNDE-212ENST00000613942 ATAD5Q96QE3 1844 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 SMCHD1A6NHR9 2005 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 hCG_1984214I3L0E3 225 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 IKBKBO14920 756 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 CCNT1O60563 726 aaKnown RBP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 VCAM1P19320 739 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 TRAPPC10P48553 1259 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 CLK2P49760 499 aaKnown RBP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 HMGCS2P54868 508 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 ATP2C1P98194 919 aaPredicted RBP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 VGLL4Q14135 290 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 MTF1Q14872 753 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 NONOQ15233 471 aaKnown RBP eCLIP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 KRT25Q7Z3Z0 450 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 ZNF713Q8N859 430 aaPredicted RBP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 CPLX3Q8WVH0 158 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 CUL5Q93034 780 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 ZBTB9Q96C00 473 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 HS3ST6Q96QI5 342 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 UIMC1Q96RL1 719 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 MTRQ99707 1265 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 DESI2Q9BSY9 194 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 CCDC94Q9BW85 323 aaPredicted RBP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 TAF1DQ9H5J8 278 aaPredicted RBP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 EFCC1Q9HA90 598 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 MEIS2O14770 477 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 CTIFO43310 598 aaKnown RBP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 TDP2O95551 362 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 HOXA13P31271 388 aaPredicted RBP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 SARSP49591 514 aaKnown RBP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 BACE1P56817 501 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 MORC3Q14149 939 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 PPP1R18Q6NYC8 613 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 USP50Q70EL3 339 aaPredicted RBP6.76□□□□□ -1.33
CRNDE-212ENST00000613942 NEK8Q86SG6 692 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 PDCL2Q8N4E4 241 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 ZNF280CQ8ND82 737 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 CHURC1Q8WUH1 139 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 PAGE5Q96GU1 130 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 WNK4Q96J92 1243 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 AGBL1Q96MI9 1066 aa6.76□□□□□ -1.33
CRNDE-212ENST00000613942 IRX2Q9BZI1 471 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms