RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 LAMB1P07942 1786 aa24.38■■□□□ 1.49
POLR2J3-220ENST00000613744 CLSTN1O94985 981 aa24.38■■□□□ 1.49
POLR2J3-220ENST00000613744 ITIH3Q06033 890 aa24.38■■□□□ 1.49
POLR2J3-220ENST00000613744 MICALCLQ6ZW33 695 aa24.38■■□□□ 1.49
POLR2J3-220ENST00000613744 SH3RF1Q7Z6J0 888 aa24.38■■□□□ 1.49
POLR2J3-220ENST00000613744 RNF41Q9H4P4 317 aaPredicted RBP24.38■■□□□ 1.49
POLR2J3-220ENST00000613744 SERPINB13Q9UIV8 391 aa24.38■■□□□ 1.49
POLR2J3-220ENST00000613744 ATRNL1Q5VV63 1379 aa24.37■■□□□ 1.49
POLR2J3-220ENST00000613744 TRAF5O00463 557 aa24.37■■□□□ 1.49
POLR2J3-220ENST00000613744 NDUFA10O95299 355 aa24.37■■□□□ 1.49
POLR2J3-220ENST00000613744 PRKG1Q13976 671 aa24.37■■□□□ 1.49
POLR2J3-220ENST00000613744 DNAJC18Q9H819 358 aa24.37■■□□□ 1.49
POLR2J3-220ENST00000613744 NID2Q14112 1375 aa24.37■■□□□ 1.49
POLR2J3-220ENST00000613744 ABL1P00519 1130 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 GNGT1P63211 74 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 LDHDQ86WU2 507 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 RAB11FIP4Q86YS3 637 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 RIN2Q8WYP3 895 aaPredicted RBP24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 SLF1Q9BQI6 1058 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 CNNM2Q9H8M5 875 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 SIPA1L1O43166 1804 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 ZBTB43O43298 467 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 KIAA0754O94854 1291 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 MMP1P03956 469 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 FNTAP49354 379 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 TOB1P50616 345 aaPredicted RBP24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 SSRP1Q08945 709 aaKnown RBP24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 FBXW10Q5XX13 1052 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 ALS2CLQ60I27 953 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 CYB5R4Q7L1T6 521 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 SGMS1Q86VZ5 419 aa24.36■■□□□ 1.49
POLR2J3-220ENST00000613744 FMNL1O95466 1100 aaPredicted RBP24.35■■□□□ 1.49
POLR2J3-220ENST00000613744 CDK8P49336 464 aa24.35■■□□□ 1.49
POLR2J3-220ENST00000613744 BANK1Q8NDB2 785 aa24.35■■□□□ 1.49
POLR2J3-220ENST00000613744 NUP88Q99567 741 aaPredicted RBP24.35■■□□□ 1.49
POLR2J3-220ENST00000613744 KRT23Q9C075 422 aa24.35■■□□□ 1.49
POLR2J3-220ENST00000613744 GGA2Q9UJY4 613 aa24.35■■□□□ 1.49
POLR2J3-220ENST00000613744 SUFUQ9UMX1 484 aa24.35■■□□□ 1.49
POLR2J3-220ENST00000613744 RANBP6O60518 1105 aaKnown RBP24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 KRT83P78385 493 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 PLCB4Q15147 1175 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 SPECC1Q5M775 1068 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 MMGT1Q8N4V1 131 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 MKNK2Q9HBH9 465 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 ZSWIM5Q9P217 1185 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 PPP1R3GB7ZBB8 358 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 KIF3CO14782 793 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 N4BP3O15049 544 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 GABPAQ06546 454 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 C16orf86Q6ZW13 317 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 ZNF572Q7Z3I7 529 aaPredicted RBP24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 ZKSCAN3Q9BRR0 538 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 GUCA1BQ9UMX6 200 aa24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 REXO2Q9Y3B8 237 aaKnown RBP24.34■■□□□ 1.49
POLR2J3-220ENST00000613744 TMCO5BA8MYB1 307 aa24.33■■□□□ 1.49
POLR2J3-220ENST00000613744 CHUKO15111 745 aa24.33■■□□□ 1.49
POLR2J3-220ENST00000613744 CD44P16070 742 aaKnown RBP24.33■■□□□ 1.49
POLR2J3-220ENST00000613744 KRT9P35527 623 aa24.33■■□□□ 1.49
POLR2J3-220ENST00000613744 KRT31Q15323 416 aa24.33■■□□□ 1.49
POLR2J3-220ENST00000613744 FAM47AQ5JRC9 791 aa24.33■■□□□ 1.49
POLR2J3-220ENST00000613744 ZNF784Q8NCA9 323 aaPredicted RBP24.33■■□□□ 1.49
POLR2J3-220ENST00000613744 PHKBQ93100 1093 aa24.33■■□□□ 1.49
POLR2J3-220ENST00000613744 SRRM3A6NNA2 597 aaPredicted RBP24.33■■□□□ 1.48
POLR2J3-220ENST00000613744 GOLGA8AA7E2F4 631 aa24.33■■□□□ 1.48
POLR2J3-220ENST00000613744 MEFVO15553 781 aaPredicted RBP24.33■■□□□ 1.48
POLR2J3-220ENST00000613744 COPB1P53618 953 aaKnown RBP24.33■■□□□ 1.48
POLR2J3-220ENST00000613744 SHROOM1Q2M3G4 852 aaPredicted RBP24.33■■□□□ 1.48
POLR2J3-220ENST00000613744 GRAMD1CQ8IYS0 662 aa24.33■■□□□ 1.48
POLR2J3-220ENST00000613744 OTUD6BQ8N6M0 293 aa24.33■■□□□ 1.48
POLR2J3-220ENST00000613744 CDCA5Q96FF9 252 aa24.33■■□□□ 1.48
POLR2J3-220ENST00000613744 ZNF408Q9H9D4 720 aa24.33■■□□□ 1.48
POLR2J3-220ENST00000613744 CAPN7Q9Y6W3 813 aa24.33■■□□□ 1.48
POLR2J3-220ENST00000613744 COL2A1P02458 1487 aaPredicted RBP24.32■■□□□ 1.48
POLR2J3-220ENST00000613744 ATP1A1P05023 1023 aaKnown RBP24.32■■□□□ 1.48
POLR2J3-220ENST00000613744 DPYDQ12882 1025 aa24.32■■□□□ 1.48
POLR2J3-220ENST00000613744 JAKMIP2Q96AA8 810 aa24.32■■□□□ 1.48
POLR2J3-220ENST00000613744 PPP2R3BQ9Y5P8 575 aa24.32■■□□□ 1.48
POLR2J3-220ENST00000613744 ROBO3Q96MS0 1386 aa24.32■■□□□ 1.48
POLR2J3-220ENST00000613744 KRT86O43790 486 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 IFNAR1P17181 557 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 SHMT1P34896 483 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 APBA1Q02410 837 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 GRIN1Q05586 938 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 DIS3L2Q8IYB7 885 aaKnown RBP24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 OR8K1Q8NGG5 319 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 ESR2Q92731 530 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 EHD4Q9H223 541 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 RWDD2AQ9UIY3 292 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 LIFRP42702 1097 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 NEDD9Q14511 834 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 RRP1BQ14684 758 aaKnown RBP24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 EMC10Q5UCC4 262 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 KLHL10Q6JEL2 608 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 EMBQ6PCB8 327 aa24.31■■□□□ 1.48
POLR2J3-220ENST00000613744 SSC5DA1L4H1 1573 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 TNFRSF8P28908 595 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 DRP2Q13474 957 aa24.3■■□□□ 1.48
POLR2J3-220ENST00000613744 PAGE5Q96GU1 130 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms