RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 KCNV1Q6PIU1 500 aa15.15■□□□□ 0.02
MDC1-209ENST00000613547 SEPT14Q6ZU15 432 aa15.15■□□□□ 0.02
MDC1-209ENST00000613547 KRT25Q7Z3Z0 450 aa15.15■□□□□ 0.02
MDC1-209ENST00000613547 NLRX1Q86UT6 975 aa15.15■□□□□ 0.02
MDC1-209ENST00000613547 ARRDC4Q8NCT1 418 aa15.15■□□□□ 0.02
MDC1-209ENST00000613547 IL31RAQ8NI17 732 aa15.15■□□□□ 0.02
MDC1-209ENST00000613547 C8orf76Q96K31 380 aa15.15■□□□□ 0.02
MDC1-209ENST00000613547 XPNPEP3Q9NQH7 507 aa15.15■□□□□ 0.02
MDC1-209ENST00000613547 SMCHD1A6NHR9 2005 aa15.15■□□□□ 0.02
MDC1-209ENST00000613547 ZNFX1Q9P2E3 1918 aaKnown RBP15.14■□□□□ 0.01
MDC1-209ENST00000613547 HTTP42858 3142 aa15.14■□□□□ 0.01
MDC1-209ENST00000613547 RBM47A0AV96 593 aaKnown RBP15.14■□□□□ 0.01
MDC1-209ENST00000613547 NKRFO15226 690 aaKnown RBP eCLIP15.14■□□□□ 0.01
MDC1-209ENST00000613547 DUSP11O75319 330 aaKnown RBP15.14■□□□□ 0.01
MDC1-209ENST00000613547 TXNP10599 105 aaKnown RBP15.14■□□□□ 0.01
MDC1-209ENST00000613547 KRT2P35908 639 aa15.14■□□□□ 0.01
MDC1-209ENST00000613547 SOX10P56693 466 aa15.14■□□□□ 0.01
MDC1-209ENST00000613547 LHX8Q68G74 356 aa15.14■□□□□ 0.01
MDC1-209ENST00000613547 KRT40Q6A162 431 aa15.14■□□□□ 0.01
MDC1-209ENST00000613547 RASGRP4Q8TDF6 673 aa15.14■□□□□ 0.01
MDC1-209ENST00000613547 SHISA4Q96DD7 197 aa15.14■□□□□ 0.01
MDC1-209ENST00000613547 PGBD1Q96JS3 809 aa15.14■□□□□ 0.01
MDC1-209ENST00000613547 WDR11Q9BZH6 1224 aa15.14■□□□□ 0.01
MDC1-209ENST00000613547 AP5M1Q9H0R1 490 aa15.14■□□□□ 0.01
MDC1-209ENST00000613547 PDGFCQ9NRA1 345 aa15.14■□□□□ 0.01
MDC1-209ENST00000613547 MRVI1Q9Y6F6 885 aa15.14■□□□□ 0.01
MDC1-209ENST00000613547 CCDC194A0A1B0GVG4 234 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 FIBPO43427 364 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 MMP1P03956 469 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
MDC1-209ENST00000613547 HSP90AA1P07900 732 aaKnown RBP15.13■□□□□ 0.01
MDC1-209ENST00000613547 ZNF76P36508 570 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 FOSBP53539 338 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 ARHGAP4P98171 946 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 CUL4AQ13619 759 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 GNL2Q13823 731 aaKnown RBP15.13■□□□□ 0.01
MDC1-209ENST00000613547 DUSP28Q4G0W2 176 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 ANO1Q5XXA6 986 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 RNF180Q86T96 592 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 CDHR1Q96JP9 859 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
MDC1-209ENST00000613547 CRISPLD2Q9H0B8 497 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 GJB4Q9NTQ9 266 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 OGDHLQ9ULD0 1010 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 Q9Y3F1 56 aa15.13■□□□□ 0.01
MDC1-209ENST00000613547 POTEFA5A3E0 1075 aa15.12■□□□□ 0.01
MDC1-209ENST00000613547 MAFGO15525 162 aa15.12■□□□□ 0.01
MDC1-209ENST00000613547 TGFB3P10600 412 aa15.12■□□□□ 0.01
MDC1-209ENST00000613547 SMPD1P17405 629 aa15.12■□□□□ 0.01
MDC1-209ENST00000613547 GJB2P29033 226 aa15.12■□□□□ 0.01
MDC1-209ENST00000613547 MRPS9P82933 396 aaKnown RBP15.12■□□□□ 0.01
MDC1-209ENST00000613547 NONOQ15233 471 aaKnown RBP eCLIP15.12■□□□□ 0.01
MDC1-209ENST00000613547 DIS3L2Q8IYB7 885 aaKnown RBP15.12■□□□□ 0.01
MDC1-209ENST00000613547 ANKLE1Q8NAG6 615 aa15.12■□□□□ 0.01
MDC1-209ENST00000613547 GPRASP2Q96D09 838 aa15.12■□□□□ 0.01
MDC1-209ENST00000613547 INTS4Q96HW7 963 aaKnown RBP15.12■□□□□ 0.01
MDC1-209ENST00000613547 RTEL1Q9NZ71 1219 aa15.12■□□□□ 0.01
MDC1-209ENST00000613547 LCTP09848 1927 aa15.11■□□□□ 0.01
MDC1-209ENST00000613547 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.11■□□□□ 0.01
MDC1-209ENST00000613547 KBTBD13C9JR72 458 aa15.11■□□□□ 0.01
MDC1-209ENST00000613547 GH1P01241 217 aa15.11■□□□□ 0.01
MDC1-209ENST00000613547 ICAM3P32942 547 aa15.11■□□□□ 0.01
MDC1-209ENST00000613547 GUCY1B3Q02153 619 aa15.11■□□□□ 0.01
MDC1-209ENST00000613547 MTMR1Q13613 665 aa15.11■□□□□ 0.01
MDC1-209ENST00000613547 NPY5RQ15761 445 aa15.11■□□□□ 0.01
MDC1-209ENST00000613547 BRDTQ58F21 947 aaPredicted RBP15.11■□□□□ 0.01
MDC1-209ENST00000613547 TLK2Q86UE8 772 aa15.11■□□□□ 0.01
MDC1-209ENST00000613547 FBXO18Q8NFZ0 1043 aa15.11■□□□□ 0.01
MDC1-209ENST00000613547 LENG1Q96BZ8 264 aaPredicted RBP15.11■□□□□ 0.01
MDC1-209ENST00000613547 ZFP91Q96JP5 570 aaPredicted RBP15.11■□□□□ 0.01
MDC1-209ENST00000613547 MXRA8Q9BRK3 442 aa15.11■□□□□ 0.01
MDC1-209ENST00000613547 UBIAD1Q9Y5Z9 338 aa15.11■□□□□ 0.01
MDC1-209ENST00000613547 SYNRGQ9UMZ2 1314 aa15.11■□□□□ 0.01
MDC1-209ENST00000613547 SPATA31C2B4DYI2 1134 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 H3BQV1 296 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 M0R2N6 131 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 DNM1LO00429 736 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 ADAMTS3O15072 1205 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 DYNC1LI2O43237 492 aaPredicted RBP15.1■□□□□ 0.01
MDC1-209ENST00000613547 RGS20O76081 388 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 PGK1P00558 417 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 CYP3A4P08684 503 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 C6orf222P0C671 652 aaPredicted RBP15.1■□□□□ 0.01
MDC1-209ENST00000613547 EN2P19622 333 aaPredicted RBP15.1■□□□□ 0.01
MDC1-209ENST00000613547 PDCP20941 246 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 USP11P51784 963 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 GJA9P57773 515 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 CEP55Q53EZ4 464 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 IFFO2Q5TF58 517 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 CCDC62Q6P9F0 684 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 NIPA1Q7RTP0 329 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 DHX37Q8IY37 1157 aaKnown RBP15.1■□□□□ 0.01
MDC1-209ENST00000613547 GIMAP8Q8ND71 665 aaPredicted RBP15.1■□□□□ 0.01
MDC1-209ENST00000613547 OR6J1Q8NGC5 347 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 TBCKQ8TEA7 893 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 NAP1L4Q99733 375 aaKnown RBP15.1■□□□□ 0.01
MDC1-209ENST00000613547 UPF3AQ9H1J1 476 aaKnown RBP15.1■□□□□ 0.01
MDC1-209ENST00000613547 JADE2Q9NQC1 790 aa15.1■□□□□ 0.01
MDC1-209ENST00000613547 GNEQ9Y223 722 aaKnown RBP15.1■□□□□ 0.01
MDC1-209ENST00000613547 ADCY6O43306 1168 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms