RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 PREX1Q8TCU6 1659 aa15.08■□□□□ 0
GGA3-220ENST00000613421 LMNB1P20700 586 aa15.08■□□□□ 0
GGA3-220ENST00000613421 CASP1P29466 404 aa15.08■□□□□ 0
GGA3-220ENST00000613421 UBXN2AP68543 259 aa15.08■□□□□ 0
GGA3-220ENST00000613421 LRRC63Q05C16 580 aa15.08■□□□□ 0
GGA3-220ENST00000613421 TMEM47Q9BQJ4 181 aa15.08■□□□□ 0
GGA3-220ENST00000613421 NDST4Q9H3R1 872 aa15.08■□□□□ 0
GGA3-220ENST00000613421 EMILIN3Q9NT22 766 aa15.08■□□□□ 0
GGA3-220ENST00000613421 GINS2Q9Y248 185 aa15.08■□□□□ 0
GGA3-220ENST00000613421 NMT2O60551 498 aa15.08■□□□□ 0
GGA3-220ENST00000613421 TRIM37O94972 964 aa15.08■□□□□ 0
GGA3-220ENST00000613421 PLA2G4BP0C869 781 aa15.08■□□□□ 0
GGA3-220ENST00000613421 CLCN6P51797 869 aa15.08■□□□□ 0
GGA3-220ENST00000613421 IRX3P78415 501 aaPredicted RBP15.08■□□□□ 0
GGA3-220ENST00000613421 DCAF15Q66K64 600 aa15.08■□□□□ 0
GGA3-220ENST00000613421 GLG1Q92896 1179 aa15.08■□□□□ 0
GGA3-220ENST00000613421 PARD6BQ9BYG5 372 aa15.08■□□□□ 0
GGA3-220ENST00000613421 PI4KBQ9UBF8 816 aa15.08■□□□□ 0
GGA3-220ENST00000613421 CLRN2A0PK11 232 aa15.08■□□□□ 0
GGA3-220ENST00000613421 NDC80O14777 642 aa15.08■□□□□ 0
GGA3-220ENST00000613421 EIF4A3P38919 411 aaKnown RBP15.08■□□□□ 0
GGA3-220ENST00000613421 KRT12Q99456 494 aa15.08■□□□□ 0
GGA3-220ENST00000613421 WDR11Q9BZH6 1224 aa15.08■□□□□ 0
GGA3-220ENST00000613421 YWHAEP62258 255 aaKnown RBP15.07■□□□□ 0
GGA3-220ENST00000613421 SHC4Q6S5L8 630 aa15.07■□□□□ 0
GGA3-220ENST00000613421 CAPS2Q9BXY5 557 aa15.07■□□□□ 0
GGA3-220ENST00000613421 COA1Q9GZY4 146 aa15.07■□□□□ 0
GGA3-220ENST00000613421 PPANQ9NQ55 473 aaKnown RBP15.07■□□□□ 0
GGA3-220ENST00000613421 IVNS1ABPQ9Y6Y0 642 aa15.07■□□□□ 0
GGA3-220ENST00000613421 MEIS1O00470 390 aa15.07■□□□□ 0
GGA3-220ENST00000613421 CHGBP05060 677 aa15.07■□□□□ 0
GGA3-220ENST00000613421 PRR29P0C7W0 189 aa15.07■□□□□ 0
GGA3-220ENST00000613421 DLATP10515 647 aaKnown RBP15.07■□□□□ 0
GGA3-220ENST00000613421 APBA1Q02410 837 aa15.07■□□□□ 0
GGA3-220ENST00000613421 CDC37Q16543 378 aaPredicted RBP15.07■□□□□ 0
GGA3-220ENST00000613421 SYDE2Q5VT97 1194 aa15.07■□□□□ 0
GGA3-220ENST00000613421 NEURL4Q96JN8 1562 aa15.07■□□□□ 0
GGA3-220ENST00000613421 ITSN1Q15811 1721 aa15.07■□□□□ 0
GGA3-220ENST00000613421 UTYO14607 1347 aa15.07■□□□□ 0
GGA3-220ENST00000613421 ADAT2Q7Z6V5 191 aaKnown RBP15.07■□□□□ 0
GGA3-220ENST00000613421 CEP63Q96MT8 703 aa15.07■□□□□ 0
GGA3-220ENST00000613421 MROH2AA6NES4 1674 aa15.07■□□□□ 0
GGA3-220ENST00000613421 TOGARAM2Q6ZUX3 1019 aa15.07■□□□□ 0
GGA3-220ENST00000613421 JRKLQ9Y4A0 524 aa15.07■□□□□ 0
GGA3-220ENST00000613421 PRPF6O94906 941 aaKnown RBP15.06■□□□□ 0
GGA3-220ENST00000613421 ATP1A2P50993 1020 aa15.06■□□□□ 0
GGA3-220ENST00000613421 FBXO38Q6PIJ6 1188 aa15.06■□□□□ 0
GGA3-220ENST00000613421 QTRT2Q9H974 415 aaKnown RBP15.06■□□□□ 0
GGA3-220ENST00000613421 FAM133AQ8N9E0 248 aa15.06■□□□□ 0
GGA3-220ENST00000613421 GRK7Q8WTQ7 553 aa15.06■□□□□ 0
GGA3-220ENST00000613421 MOCS3O95396 460 aa15.06■□□□□ 0
GGA3-220ENST00000613421 KRT15P19012 456 aa15.06■□□□□ 0
GGA3-220ENST00000613421 AOC3Q16853 763 aa15.06■□□□□ 0
GGA3-220ENST00000613421 PPP1R21Q6ZMI0 780 aa15.06■□□□□ 0
GGA3-220ENST00000613421 NACC1Q96RE7 527 aa15.06■□□□□ 0
GGA3-220ENST00000613421 TECPR2O15040 1411 aa15.06■□□□□ 0
GGA3-220ENST00000613421 STAT2P52630 851 aa15.06■□□□□ 0
GGA3-220ENST00000613421 CYP27A1Q02318 531 aa15.06■□□□□ 0
GGA3-220ENST00000613421 HHATQ5VTY9 493 aa15.06■□□□□ 0
GGA3-220ENST00000613421 TBC1D9BQ66K14 1250 aa15.06■□□□□ 0
GGA3-220ENST00000613421 TRIM6Q9C030 488 aaPredicted RBP15.06■□□□□ 0
GGA3-220ENST00000613421 NCOA3Q9Y6Q9 1424 aa15.05■□□□□ 0
GGA3-220ENST00000613421 CLIC2O15247 247 aa15.05■□□□□ 0
GGA3-220ENST00000613421 TBC1D8O95759 1140 aa15.05■□□□□ 0
GGA3-220ENST00000613421 KIF11P52732 1056 aa15.05■□□□□ 0
GGA3-220ENST00000613421 EPHB4P54760 987 aa15.05■□□□□ 0
GGA3-220ENST00000613421 ANO3Q9BYT9 981 aa15.05■□□□□ 0
GGA3-220ENST00000613421 ZMYND10O75800 440 aa15.05■□□□□ 0
GGA3-220ENST00000613421 CCDC89Q8N998 374 aa15.05■□□□□ 0
GGA3-220ENST00000613421 SERPINA10Q9UK55 444 aa15.05■□□□□ 0
GGA3-220ENST00000613421 PCDHA13Q9Y5I0 950 aa15.05■□□□□ 0
GGA3-220ENST00000613421 COL3A1P02461 1466 aaPredicted RBP15.05■□□□□ -0
GGA3-220ENST00000613421 SERPING1P05155 500 aa15.05■□□□□ -0
GGA3-220ENST00000613421 C2orf54Q08AI8 447 aa15.05■□□□□ -0
GGA3-220ENST00000613421 GRM4Q14833 912 aa15.05■□□□□ -0
GGA3-220ENST00000613421 CFAP157Q5JU67 520 aa15.05■□□□□ -0
GGA3-220ENST00000613421 NAA35Q5VZE5 725 aa15.05■□□□□ -0
GGA3-220ENST00000613421 ZBTB8OSQ8IWT0 167 aa15.05■□□□□ -0
GGA3-220ENST00000613421 SLC17A8Q8NDX2 589 aa15.05■□□□□ -0
GGA3-220ENST00000613421 POMGNT1Q8WZA1 660 aa15.05■□□□□ -0
GGA3-220ENST00000613421 MLXIPQ9HAP2 919 aa15.05■□□□□ -0
GGA3-220ENST00000613421 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.05■□□□□ -0
GGA3-220ENST00000613421 PPLO60437 1756 aa15.05■□□□□ -0
GGA3-220ENST00000613421 USP17L5A8MUK1 530 aa15.05■□□□□ -0
GGA3-220ENST00000613421 RFX5P48382 616 aaPredicted RBP15.05■□□□□ -0
GGA3-220ENST00000613421 UNC13DQ70J99 1090 aa15.05■□□□□ -0
GGA3-220ENST00000613421 RAB20Q9NX57 234 aa15.05■□□□□ -0
GGA3-220ENST00000613421 STIM2Q9P246 746 aa15.05■□□□□ -0
GGA3-220ENST00000613421 LGALS16A8MUM7 142 aa15.04■□□□□ -0
GGA3-220ENST00000613421 SORBS3O60504 671 aa15.04■□□□□ -0
GGA3-220ENST00000613421 HEXIM1O94992 359 aaKnown RBP15.04■□□□□ -0
GGA3-220ENST00000613421 MFAP3P55082 362 aa15.04■□□□□ -0
GGA3-220ENST00000613421 PDIA6Q15084 440 aa15.04■□□□□ -0
GGA3-220ENST00000613421 CCDC97Q96F63 343 aaPredicted RBP15.04■□□□□ -0
GGA3-220ENST00000613421 VPS37BQ9H9H4 285 aa15.04■□□□□ -0
GGA3-220ENST00000613421 ABHD10Q9NUJ1 306 aa15.04■□□□□ -0
GGA3-220ENST00000613421 RNF14Q9UBS8 474 aa15.04■□□□□ -0
GGA3-220ENST00000613421 OVOS2A0A0G2JMS6 1433 aa15.04■□□□□ -0
GGA3-220ENST00000613421 PLEKHG2Q9H7P9 1386 aa15.04■□□□□ -0
GGA3-220ENST00000613421 TRIM49BA6NDI0 452 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms