RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 WDR78Q5VTH9 848 aa22.19■■□□□ 1.14
SRRM3-205ENST00000612155 USP17L6PQ6QN14 398 aa22.19■■□□□ 1.14
SRRM3-205ENST00000612155 NCAPG2Q86XI2 1143 aa22.19■■□□□ 1.14
SRRM3-205ENST00000612155 DRC7Q8IY82 874 aa22.19■■□□□ 1.14
SRRM3-205ENST00000612155 GOLGA6L6A8MZA4 724 aa22.19■■□□□ 1.14
SRRM3-205ENST00000612155 TRPA1O75762 1119 aa22.19■■□□□ 1.14
SRRM3-205ENST00000612155 PTGDRQ13258 359 aa22.19■■□□□ 1.14
SRRM3-205ENST00000612155 KIAA1524Q8TCG1 905 aa22.19■■□□□ 1.14
SRRM3-205ENST00000612155 NAP1L5Q96NT1 182 aaPredicted RBP22.19■■□□□ 1.14
SRRM3-205ENST00000612155 RNF146Q9NTX7 359 aa22.19■■□□□ 1.14
SRRM3-205ENST00000612155 TMEM260Q9NX78 707 aa22.19■■□□□ 1.14
SRRM3-205ENST00000612155 RABGAP1Q9Y3P9 1069 aa22.19■■□□□ 1.14
SRRM3-205ENST00000612155 CFBP00751 764 aa22.18■■□□□ 1.14
SRRM3-205ENST00000612155 ATP2C1P98194 919 aaPredicted RBP22.18■■□□□ 1.14
SRRM3-205ENST00000612155 ZRSR1Q15695 479 aaKnown RBP22.18■■□□□ 1.14
SRRM3-205ENST00000612155 BLIDQ8IZY5 108 aa22.18■■□□□ 1.14
SRRM3-205ENST00000612155 CLEC4DQ8WXI8 215 aa22.18■■□□□ 1.14
SRRM3-205ENST00000612155 EFCC1Q9HA90 598 aa22.18■■□□□ 1.14
SRRM3-205ENST00000612155 SH3GLB2Q9NR46 395 aa22.18■■□□□ 1.14
SRRM3-205ENST00000612155 NOLC1Q14978 699 aaKnown RBP eCLIP22.18■■□□□ 1.14
SRRM3-205ENST00000612155 MB21D1Q8N884 522 aa22.18■■□□□ 1.14
SRRM3-205ENST00000612155 PURBQ96QR8 312 aaKnown RBP22.18■■□□□ 1.14
SRRM3-205ENST00000612155 BIN2Q9UBW5 565 aaPredicted RBP22.18■■□□□ 1.14
SRRM3-205ENST00000612155 PCDHA4Q9UN74 947 aa22.18■■□□□ 1.14
SRRM3-205ENST00000612155 TPM3P06753 285 aa22.17■■□□□ 1.14
SRRM3-205ENST00000612155 FDX1P10109 184 aa22.17■■□□□ 1.14
SRRM3-205ENST00000612155 ERCC3P19447 782 aa22.17■■□□□ 1.14
SRRM3-205ENST00000612155 SARSP49591 514 aaKnown RBP22.17■■□□□ 1.14
SRRM3-205ENST00000612155 ARID5BQ14865 1188 aa22.17■■□□□ 1.14
SRRM3-205ENST00000612155 POSTNQ15063 836 aa22.17■■□□□ 1.14
SRRM3-205ENST00000612155 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.17■■□□□ 1.14
SRRM3-205ENST00000612155 C4orf32Q8N8J7 132 aa22.17■■□□□ 1.14
SRRM3-205ENST00000612155 SYMPKQ92797 1274 aaKnown RBP22.17■■□□□ 1.14
SRRM3-205ENST00000612155 PSTPIP2Q9H939 334 aa22.17■■□□□ 1.14
SRRM3-205ENST00000612155 SPTLC3Q9NUV7 552 aa22.17■■□□□ 1.14
SRRM3-205ENST00000612155 MAN1B1Q9UKM7 699 aa22.17■■□□□ 1.14
SRRM3-205ENST00000612155 MAP2K2P36507 400 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 NSMFQ6X4W1 530 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 GPRC5AQ8NFJ5 357 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 ZMYND12Q9H0C1 365 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 ZFYVE28Q9HCC9 887 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 ADGRA2Q96PE1 1338 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 ATP2A1O14983 1001 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 TLR2O60603 784 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 ADCY7P51828 1080 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 NT5DC1Q5TFE4 455 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 JAKMIP3Q5VZ66 844 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 CACTINQ8WUQ7 758 aaKnown RBP22.16■■□□□ 1.14
SRRM3-205ENST00000612155 FERMT2Q96AC1 680 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 TSKSQ9UJT2 592 aa22.16■■□□□ 1.14
SRRM3-205ENST00000612155 CA12O43570 354 aa22.15■■□□□ 1.14
SRRM3-205ENST00000612155 CALML3P27482 149 aa22.15■■□□□ 1.14
SRRM3-205ENST00000612155 OAZ1P54368 228 aa22.15■■□□□ 1.14
SRRM3-205ENST00000612155 RIOX2Q8IUF8 465 aa22.15■■□□□ 1.14
SRRM3-205ENST00000612155 CCDC148Q8NFR7 591 aa22.15■■□□□ 1.14
SRRM3-205ENST00000612155 RNF186Q9NXI6 227 aa22.15■■□□□ 1.14
SRRM3-205ENST00000612155 PCDHA6Q9UN73 950 aa22.15■■□□□ 1.14
SRRM3-205ENST00000612155 MRPL11Q9Y3B7 192 aaKnown RBP22.15■■□□□ 1.14
SRRM3-205ENST00000612155 PCDHA8Q9Y5H6 950 aa22.15■■□□□ 1.14
SRRM3-205ENST00000612155 ABCB11O95342 1321 aa22.15■■□□□ 1.14
SRRM3-205ENST00000612155 MCM7P33993 719 aa22.15■■□□□ 1.14
SRRM3-205ENST00000612155 GCLCP48506 637 aaPredicted RBP22.15■■□□□ 1.14
SRRM3-205ENST00000612155 TRAPPC10P48553 1259 aa22.15■■□□□ 1.14
SRRM3-205ENST00000612155 C6orf50Q9HD87 102 aa22.15■■□□□ 1.14
SRRM3-205ENST00000612155 VWA3AA6NCI4 1184 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 hCG_1984214I3L0E3 225 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 MEIS2O14770 477 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 IKBKBO14920 756 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 BMP15O95972 392 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 C17orf99Q6UX52 265 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 SLC30A10Q6XR72 485 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 FCHSD1Q86WN1 690 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 ZNF713Q8N859 430 aaPredicted RBP22.14■■□□□ 1.13
SRRM3-205ENST00000612155 CCDC12Q8WUD4 166 aaPredicted RBP22.14■■□□□ 1.13
SRRM3-205ENST00000612155 DHX58Q96C10 678 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 RIC8AQ9NPQ8 531 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 BCRP11274 1271 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 ATP1A3P13637 1013 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 SH3RF1Q7Z6J0 888 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 DAGLBQ8NCG7 672 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 SPATA20Q8TB22 786 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 CUL5Q93034 780 aa22.14■■□□□ 1.13
SRRM3-205ENST00000612155 ZCCHC17Q9NP64 241 aaKnown RBP22.14■■□□□ 1.13
SRRM3-205ENST00000612155 COL20A1Q9P218 1284 aa22.13■■□□□ 1.13
SRRM3-205ENST00000612155 MORF4L1Q9UBU8 362 aa22.13■■□□□ 1.13
SRRM3-205ENST00000612155 CASP1P29466 404 aa22.12■■□□□ 1.13
SRRM3-205ENST00000612155 UBXN2AP68543 259 aa22.12■■□□□ 1.13
SRRM3-205ENST00000612155 MORC3Q14149 939 aa22.12■■□□□ 1.13
SRRM3-205ENST00000612155 FAM110CQ1W6H9 321 aa22.12■■□□□ 1.13
SRRM3-205ENST00000612155 PPP1R18Q6NYC8 613 aa22.12■■□□□ 1.13
SRRM3-205ENST00000612155 XPO4Q9C0E2 1151 aaKnown RBP22.12■■□□□ 1.13
SRRM3-205ENST00000612155 ACAD9Q9H845 621 aa22.12■■□□□ 1.13
SRRM3-205ENST00000612155 A1CFQ9NQ94 594 aaKnown RBP22.12■■□□□ 1.13
SRRM3-205ENST00000612155 IFNKQ9P0W0 207 aa22.12■■□□□ 1.13
SRRM3-205ENST00000612155 R3HCC1Q9Y3T6 440 aaKnown RBP22.12■■□□□ 1.13
SRRM3-205ENST00000612155 RPS6P62753 249 aaKnown RBP22.12■■□□□ 1.13
SRRM3-205ENST00000612155 BAATQ14032 418 aaPredicted RBP22.12■■□□□ 1.13
SRRM3-205ENST00000612155 MED15Q96RN5 788 aa22.12■■□□□ 1.13
SRRM3-205ENST00000612155 SMTNL1A8MU46 457 aa22.11■■□□□ 1.13
SRRM3-205ENST00000612155 PGK2P07205 417 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms