RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 PCMTD1Q96MG8 357 aaPredicted RBP11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 GSDMAQ96QA5 445 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 PANX2Q96RD6 677 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 TMEM60Q9H2L4 133 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 VAT1LQ9HCJ6 419 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 TMOD4Q9NZQ9 345 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 VPS18Q9P253 973 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 SAP30BPQ9UHR5 308 aaKnown RBP11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 EME2A4GXA9 379 aaPredicted RBP11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 ORC4O43929 436 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 TUBB4AP04350 444 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 HIBADHP31937 336 aaKnown RBP11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 VSNL1P62760 191 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 ATP2C1P98194 919 aaPredicted RBP11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 DIXDC1Q155Q3 683 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 HSP90B2PQ58FF3 399 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 FKBP15Q5T1M5 1219 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 SRGAP1Q7Z6B7 1085 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 MICAL1Q8TDZ2 1067 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 KLRG1Q96E93 195 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 TRIM6Q9C030 488 aaPredicted RBP11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 ABCB6Q9NP58 842 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 SEMA3EO15041 775 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 ZSCAN9O15535 394 aaPredicted RBP11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 RPN1P04843 607 aaKnown RBP11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 PCP11498 1178 aaKnown RBP11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 PBX1P40424 430 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 TFAP4Q01664 338 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 E2F5Q15329 346 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 PDXDC2PQ6P474 469 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 GSPT2Q8IYD1 628 aaKnown RBP11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 RABGGTAQ92696 567 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 FERMT2Q96AC1 680 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 BICD1Q96G01 975 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 UTP6Q9NYH9 597 aaKnown RBP11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 CDC23Q9UJX2 597 aa11.88□□□□□ -0.51
PCDHGC3-202ENST00000611950 TTC26A0AVF1 554 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 ZPR1O75312 459 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 CALM1P0DP23 149 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 CALM2P0DP24 149 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 CALM3P0DP25 149 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 PEX19P40855 299 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 TCP11X2Q5H9J9 407 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 COL13A1Q5TAT6 717 aaPredicted RBP11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 RCSD1Q6JBY9 416 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 TTC30AQ86WT1 665 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 CNGA4Q8IV77 575 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 ARMC2Q8NEN0 867 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 GIMAP7Q8NHV1 300 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 SMCR8Q8TEV9 937 aaPredicted RBP11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 CCDC102AQ96A19 550 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 TRIM47Q96LD4 638 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 CRNKL1Q9BZJ0 848 aaKnown RBP11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 PEX14O75381 377 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 PYGLP06737 847 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 FSTL1Q12841 308 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 GOLGA5Q8TBA6 731 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 NLRP3Q96P20 1036 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 PSMB7Q99436 277 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 PLEKHA4Q9H4M7 779 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 WDR70Q9NW82 654 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 NARFQ9UHQ1 456 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 CTDP1Q9Y5B0 961 aaPredicted RBP11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 LAMB1P07942 1786 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 B4DLN1 442 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 SLC7A5Q01650 507 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 CYP27A1Q02318 531 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 ZFYVE27Q5T4F4 411 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 LRRC15Q8TF66 581 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 CTAGE1Q96RT6 745 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 KAT14Q9H8E8 782 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 DUSP10Q9Y6W6 482 aa11.87□□□□□ -0.51
PCDHGC3-202ENST00000611950 CCDC194A0A1B0GVG4 234 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 PARP1P09874 1014 aaKnown RBP11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 USP5P45974 858 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 RASSF7Q02833 373 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 GRIK5Q16478 980 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 TAX1BP1Q86VP1 789 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 TRIM42Q8IWZ5 723 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 ATP8A2Q9NTI2 1148 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 AGPAT5Q9NUQ2 364 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 PDS5AQ29RF7 1337 aaKnown RBP11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 CCDC88AQ3V6T2 1871 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 MACROD2A1Z1Q3 448 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 ANKRD65E5RJM6 399 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 POLRMTO00411 1230 aaKnown RBP11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 GCFC2P16383 781 aaKnown RBP11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 TM4SF1P30408 202 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 ELF1P32519 619 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 SNX1Q13596 522 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 WDR78Q5VTH9 848 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 DZIP1Q86YF9 867 aaKnown RBP11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 BLIDQ8IZY5 108 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 PNMA1Q8ND90 353 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 TBC1D5Q92609 795 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 NAPGQ99747 312 aaPredicted RBP11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 ADAM21Q9UKJ8 722 aa11.86□□□□□ -0.51
PCDHGC3-202ENST00000611950 REXO2Q9Y3B8 237 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms