RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 AKR1A1P14550 325 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 EDNRBP24530 442 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 NAPAP54920 295 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 PKN1Q16512 942 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 ARHGEF16Q5VV41 709 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 LARP1BQ659C4 914 aaKnown RBP10.1□□□□□ -0.79
SMAD4-217ENST00000611848 LRSAM1Q6UWE0 723 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 GPKOWQ92917 476 aaPredicted RBP eCLIP10.1□□□□□ -0.795e-7■■■□□ 17.4
SMAD4-217ENST00000611848 TAAR1Q96RJ0 339 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 IWS1Q96ST2 819 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 CRISPLD2Q9H0B8 497 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 VTA1Q9NP79 307 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 COL20A1Q9P218 1284 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 DDX20Q9UHI6 824 aaKnown RBP10.1□□□□□ -0.79
SMAD4-217ENST00000611848 ZHX1Q9UKY1 873 aaPredicted RBP10.1□□□□□ -0.79
SMAD4-217ENST00000611848 FAM184BQ9ULE4 1060 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 STXBP3O00186 592 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 MEIS2O14770 477 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 DEXIO95424 95 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 TFRCP02786 760 aaKnown RBP10.09□□□□□ -0.79
SMAD4-217ENST00000611848 EN2P19622 333 aaPredicted RBP10.09□□□□□ -0.79
SMAD4-217ENST00000611848 HOXA13P31271 388 aaPredicted RBP10.09□□□□□ -0.79
SMAD4-217ENST00000611848 UBE2HP62256 183 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 PDE4DQ08499 809 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 CSPP1Q1MSJ5 1256 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 IFFO2Q5TF58 517 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 LHX8Q68G74 356 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 ANKLE1Q8NAG6 615 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 SMARCC2Q8TAQ2 1214 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 SYAP1Q96A49 352 aaPredicted RBP10.09□□□□□ -0.79
SMAD4-217ENST00000611848 LLPHQ9BRT6 129 aaKnown RBP10.09□□□□□ -0.79
SMAD4-217ENST00000611848 KATNBL1Q9H079 304 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 GDPD2Q9HCC8 539 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 PXMP2Q9NR77 195 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 OGDHLQ9ULD0 1010 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 KIAA1217Q5T5P2 1943 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 STK36Q9NRP7 1315 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 FRMPD3Q5JV73 1810 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 BRCA2P51587 3418 aa10.09□□□□□ -0.79
SMAD4-217ENST00000611848 ESYT2A0FGR8 921 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 SMCO2A6NFE2 343 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 NR3C2P08235 984 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 RARBP10826 455 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 EIF2AK2P19525 551 aaKnown RBP10.08□□□□□ -0.8
SMAD4-217ENST00000611848 GNA11P29992 359 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 STXBP2Q15833 593 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 FOXD4L6Q3SYB3 417 aaPredicted RBP10.08□□□□□ -0.8
SMAD4-217ENST00000611848 IQSEC1Q6DN90 963 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 TYW1BQ6NUM6 668 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 USP17L6PQ6QN14 398 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 FOXD4L3Q6VB84 417 aaPredicted RBP10.08□□□□□ -0.8
SMAD4-217ENST00000611848 FCHSD1Q86WN1 690 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 FAM177A1Q8N128 213 aaPredicted RBP10.08□□□□□ -0.8
SMAD4-217ENST00000611848 CCDC148Q8NFR7 591 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 RIC8AQ9NPQ8 531 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 SH3GLB2Q9NR46 395 aa10.08□□□□□ -0.8
SMAD4-217ENST00000611848 VPS37CA5D8V6 355 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-217ENST00000611848 PPFIA3O75145 1194 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 FOSP01100 380 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-217ENST00000611848 NASPP49321 788 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-217ENST00000611848 RGS19P49795 217 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 ADCY7P51828 1080 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 DNM1Q05193 864 aaKnown RBP10.07□□□□□ -0.8
SMAD4-217ENST00000611848 CCDC144BQ3MJ40 725 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 TAPT1Q6NXT6 567 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 EEPD1Q7L9B9 569 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 FBXO16Q8IX29 292 aaPredicted RBP10.07□□□□□ -0.8
SMAD4-217ENST00000611848 BICD2Q8TD16 824 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 SHISA4Q96DD7 197 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 PPP1R9BQ96SB3 815 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 PDCD2LQ9BRP1 358 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 ZMYND12Q9H0C1 365 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 RBSNQ9H1K0 784 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 C6orf50Q9HD87 102 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 LRRC37A2A6NM11 1700 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 FRMPD4Q14CM0 1322 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 RBM47A0AV96 593 aaKnown RBP10.07□□□□□ -0.8
SMAD4-217ENST00000611848 SYCE3A1L190 88 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 SPDYE3A6NKU9 549 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 DTNBO60941 627 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 DUSP11O75319 330 aaKnown RBP10.07□□□□□ -0.8
SMAD4-217ENST00000611848 EIF3JO75822 258 aaKnown RBP10.07□□□□□ -0.8
SMAD4-217ENST00000611848 CTDNEP1O95476 244 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 CCND2P30279 289 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 AP3B2Q13367 1082 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 PGM5Q15124 567 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 MCTP2Q6DN12 878 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 XRRA1Q6P2D8 792 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 VSIG10LQ86VR7 867 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 ARRDC4Q8NCT1 418 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 SCFD2Q8WU76 684 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 WASF1Q92558 559 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 EHMT1Q9H9B1 1298 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 Q9Y3F1 56 aa10.07□□□□□ -0.8
SMAD4-217ENST00000611848 ELP1O95163 1332 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 PDE4DIPQ5VU43 2346 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 JAK2O60674 1132 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 STAM2O75886 525 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 MYCLP12524 364 aaPredicted RBP10.06□□□□□ -0.8
SMAD4-217ENST00000611848 XBP1P17861 261 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms