RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 DYDC1Q8WWB3 177 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 CCDC17Q96LX7 622 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 TRIM31Q9BZY9 425 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 TAOK3Q9H2K8 898 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 MLXIPQ9HAP2 919 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 EMILIN3Q9NT22 766 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 SWAP70Q9UH65 585 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 TFR2Q9UP52 801 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 FAM205AQ6ZU69 1335 aa9.57□□□□□ -0.88
LIG4-204ENST00000611712 LRRC53A6NM62 1247 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 PLA2G4BP0C869 781 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 SRGNP10124 158 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 GUCY2DQ02846 1103 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 CCDC93Q567U6 631 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 RDH13Q8NBN7 331 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 GJA10Q969M2 543 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.56□□□□□ -0.88
LIG4-204ENST00000611712 EIF3CLB5ME19 914 aaKnown RBP9.56□□□□□ -0.88
LIG4-204ENST00000611712 PPEF1O14829 653 aaPredicted RBP9.56□□□□□ -0.88
LIG4-204ENST00000611712 FTCDO95954 541 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 CCDC174Q6PII3 467 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 ARFGAP2Q8N6H7 521 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 FAM133AQ8N9E0 248 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 CCDC26Q8TAB7 109 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 U2AF1L4Q8WU68 220 aaKnown RBP9.56□□□□□ -0.88
LIG4-204ENST00000611712 EIF3CQ99613 913 aaKnown RBP9.56□□□□□ -0.88
LIG4-204ENST00000611712 AMNQ9BXJ7 453 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 TLDC2A0PJX2 215 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 EXOC3O60645 756 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 TBC1D8O95759 1140 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 VEGFAP15692 232 aaPredicted RBP9.56□□□□□ -0.88
LIG4-204ENST00000611712 EXOC3L4Q17RC7 722 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 NOA1Q8NC60 698 aaKnown RBP9.56□□□□□ -0.88
LIG4-204ENST00000611712 ADAMTS1Q9UHI8 967 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 MAD2L2Q9UI95 211 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 TNS2Q63HR2 1409 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 ARHGEF35A5YM69 484 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 USP17L15C9J2P7 530 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 USP17L13C9JLJ4 530 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 USP17L11C9JVI0 530 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 USP17L18D6R9N7 530 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 USP17L22D6RA61 530 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 USP17L17D6RBQ6 530 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 USP17L19D6RCP7 530 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 USP17L20D6RJB6 530 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 DDX39AO00148 427 aaKnown RBP9.56□□□□□ -0.88
LIG4-204ENST00000611712 USP17L24Q0WX57 530 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 USP17L6PQ6QN14 398 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 CLEC10AQ8IUN9 316 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 GSPT2Q8IYD1 628 aaKnown RBP9.56□□□□□ -0.88
LIG4-204ENST00000611712 GUF1Q8N442 669 aaKnown RBP9.56□□□□□ -0.88
LIG4-204ENST00000611712 RAD54LQ92698 747 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 MMS19Q96T76 1030 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 ARHGEF10LQ9HCE6 1279 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 ATRNO75882 1429 aa9.56□□□□□ -0.88
LIG4-204ENST00000611712 GOLGA6L7A0A1B0GV03 622 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 ANO9A1A5B4 782 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 AKR1B1P15121 316 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 ALDH1B1P30837 517 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 STAT1P42224 750 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 KLK7P49862 253 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 USP14P54578 494 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 SEMA3FQ13275 785 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 ARHGAP44Q17R89 818 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 GBP6Q6ZN66 633 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 SPICE1Q8N0Z3 855 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 OTUD6BQ8N6M0 293 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 KRT12Q99456 494 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 ZMYND12Q9H0C1 365 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 SUGCTQ9HAC7 445 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 HDAC9Q9UKV0 1011 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 AFDNP55196 1824 aaKnown RBP9.55□□□□□ -0.88
LIG4-204ENST00000611712 GSTTP1A0A1W2PQM5 241 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 SMIM23A6NLE4 172 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 USP17L10C9JJH3 530 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 E9PMD0 336 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 ATP2C2O75185 946 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 ABCB4P21439 1286 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 CYP2J2P51589 502 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 GNGT1P63211 74 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 SH3RF1Q7Z6J0 888 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 C7orf25Q9BPX7 421 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 DBNDD1Q9H9R9 158 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 FAM184BQ9ULE4 1060 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 STK24Q9Y6E0 443 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 GAS7O60861 476 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 H2AFZP0C0S5 128 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 POTEJP0CG39 1038 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 CYP2C19P33261 490 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 ATP1A2P50993 1020 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 CACNB3P54284 484 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 SEPT2Q15019 361 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 SLC10A5Q5PT55 438 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 H2AFVQ71UI9 128 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 DAAM2Q86T65 1068 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 KANSL2Q9H9L4 492 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 EPB41L5Q9HCM4 733 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 ZNF446Q9NWS9 450 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 RASAL2Q9UJF2 1139 aa9.55□□□□□ -0.88
LIG4-204ENST00000611712 TACC3Q9Y6A5 838 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms