RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 ICAM1P05362 532 aa20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 SSBP05455 408 aaKnown RBP eCLIP20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 CYP4A11Q02928 519 aa20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 ARID5BQ14865 1188 aa20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 FAM177A1Q8N128 213 aaPredicted RBP20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 SPATA20Q8TB22 786 aa20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 LPAR1Q92633 364 aa20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 NCAPH2Q6IBW4 605 aa20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 POTEEQ6S8J3 1075 aa20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 ZNF710Q8N1W2 664 aa20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 CDCA5Q96FF9 252 aa20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 CCSER1Q9C0I3 900 aa20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 SAMSN1Q9NSI8 373 aaKnown RBP20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 CTDP1Q9Y5B0 961 aaPredicted RBP20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 MORC2Q9Y6X9 1032 aaPredicted RBP20.48■□□□□ 0.87
SNAPC3-207ENST00000610884 BRCA2P51587 3418 aa20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 E9PMD0 336 aa20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 DDX39AO00148 427 aaKnown RBP20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 SREBF1P36956 1147 aa20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 ZNF75DP51815 510 aa20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 NT5DC1Q5TFE4 455 aa20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 KANK3Q6NY19 840 aa20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 POTEB3A0JP26 581 aa20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 GLTPD2A6NH11 291 aa20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 EIF2AK2P19525 551 aaKnown RBP20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 POTEBQ6S5H4 581 aa20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 KIAA1524Q8TCG1 905 aa20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 BLOC1S4Q9NUP1 217 aa20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 IFNKQ9P0W0 207 aa20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 MRPL11Q9Y3B7 192 aaKnown RBP20.47■□□□□ 0.87
SNAPC3-207ENST00000610884 ARP10275 920 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 USP11P51784 963 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 PSMC6P62333 389 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 MAP3K9P80192 1104 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 AP3B2Q13367 1082 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 TMEM266Q2M3C6 531 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 TRERF1Q96PN7 1200 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 TAAR1Q96RJ0 339 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 NPHP3-ACAD11A0A0J9YXS1 232 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 ZBTB39O15060 712 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 PPP1R12BO60237 982 aaPredicted RBP20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 SORBS3O60504 671 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 SMC2O95347 1197 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 RPN1P04843 607 aaKnown RBP20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 GTF2F1P35269 517 aaKnown RBP eCLIP20.46■□□□□ 0.874e-7■■■■□ 24.6
SNAPC3-207ENST00000610884 RPS6P62753 249 aaKnown RBP20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 CCDC144BQ3MJ40 725 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 ETNPPLQ8TBG4 499 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 BCAS3Q9H6U6 928 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 KCNMB3Q9NPA1 279 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 KIAA1024Q9UPX6 916 aa20.46■□□□□ 0.87
SNAPC3-207ENST00000610884 POTEFA5A3E0 1075 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 EML1O00423 815 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 FCER1AP12319 257 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 FXR2P51116 673 aaKnown RBP eCLIP20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 TMEM132BQ14DG7 1078 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 KMT5BQ4FZB7 885 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 SNRNP48Q6IEG0 339 aaKnown RBP20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 POTEGQ6S5H5 508 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 TAF1DQ9H5J8 278 aaPredicted RBP20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 AS3MTQ9HBK9 375 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 RGL1Q9NZL6 768 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 GOLGA6L6A8MZA4 724 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 MED24O75448 989 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 PTGS1P23219 599 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 CCT6AP40227 531 aaKnown RBP20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 GADL1Q6ZQY3 521 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 FILIP1Q7Z7B0 1213 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 CDK5RAP3Q96JB5 506 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 WDR11Q9BZH6 1224 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 XPO4Q9C0E2 1151 aaKnown RBP20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 NFE2L3Q9Y4A8 694 aa20.45■□□□□ 0.86
SNAPC3-207ENST00000610884 IGLV3-22A0A075B6J6 115 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 TRIM49BA6NDI0 452 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 USP14P54578 494 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 KRT79Q5XKE5 535 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 PLA2G4DQ86XP0 818 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 GLIS3Q8NEA6 775 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 CALML4Q96GE6 196 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 CCDC94Q9BW85 323 aaPredicted RBP20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 KBTBD4Q9NVX7 518 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 CTNND2Q9UQB3 1225 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 CSADQ9Y600 493 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 DOCK1Q14185 1865 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 PPP1R3GB7ZBB8 358 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 PIK3CDO00329 1044 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 GTPBP6O43824 516 aaPredicted RBP20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 ECM2O94769 699 aaPredicted RBP20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 MYCLP12524 364 aaPredicted RBP20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 LRMPQ12912 555 aa20.44■□□□□ 0.86
SNAPC3-207ENST00000610884 DNAH12Q6ZR08 3092 aa20.43■□□□□ 0.86
SNAPC3-207ENST00000610884 MYMKA6NI61 221 aa20.43■□□□□ 0.86
SNAPC3-207ENST00000610884 PLA2G6O60733 806 aa20.43■□□□□ 0.86
SNAPC3-207ENST00000610884 PRCPP42785 496 aa20.43■□□□□ 0.86
SNAPC3-207ENST00000610884 MYL5Q02045 173 aa20.43■□□□□ 0.86
SNAPC3-207ENST00000610884 CCDC186Q7Z3E2 898 aa20.43■□□□□ 0.86
SNAPC3-207ENST00000610884 AK8Q96MA6 479 aa20.43■□□□□ 0.86
SNAPC3-207ENST00000610884 GLT8D2Q9H1C3 349 aa20.43■□□□□ 0.86
SNAPC3-207ENST00000610884 TMOD4Q9NZQ9 345 aa20.43■□□□□ 0.86
SNAPC3-207ENST00000610884 TBC1D7Q9P0N9 293 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms