RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 UCMAQ8WVF2 138 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 MAP3K14Q99558 947 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 GDF3Q9NR23 364 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 BABAM1Q9NWV8 329 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 CD2APQ9Y5K6 639 aa13.8□□□□□ -0.2
CTCFL-218ENST00000608440 CAPN15O75808 1086 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 SHBGP04278 402 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 ZNF24P17028 368 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
CTCFL-218ENST00000608440 RAD23BP54727 409 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 BPIFB4P59827 614 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 ZNF844Q08AG5 666 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 USP49Q70CQ1 688 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 KRI1Q8N9T8 703 aaKnown RBP13.79□□□□□ -0.2
CTCFL-218ENST00000608440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.79□□□□□ -0.2
CTCFL-218ENST00000608440 ATXN10Q9UBB4 475 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 BZW2Q9Y6E2 419 aaKnown RBP13.79□□□□□ -0.2
CTCFL-218ENST00000608440 JCADQ9P266 1359 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 SH3TC1Q8TE82 1336 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 KLF18A0A0U1RQI7 1052 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 NUTM2BA6NNL0 878 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-218ENST00000608440 NUTM2EB1AL46 878 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-218ENST00000608440 FAM200BP0CF97 657 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 TNFRSF8P28908 595 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 TTF1Q15361 905 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-218ENST00000608440 TSHZ1Q6ZSZ6 1077 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 IFNL2Q8IZJ0 200 aa13.79□□□□□ -0.2
CTCFL-218ENST00000608440 XPO6Q96QU8 1125 aaKnown RBP13.79□□□□□ -0.2
CTCFL-218ENST00000608440 MOV10L1Q9BXT6 1211 aaKnown RBP13.79□□□□□ -0.2
CTCFL-218ENST00000608440 EIF4A1P60842 406 aaKnown RBP13.78□□□□□ -0.2
CTCFL-218ENST00000608440 DPYDQ12882 1025 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 CUL4BQ13620 913 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 SEPT2Q15019 361 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 SETDB1Q15047 1291 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 SEPT14Q6ZU15 432 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 MREGQ8N565 214 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 TRIML1Q8N9V2 468 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 UBLCP1Q8WVY7 318 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-218ENST00000608440 TSPAN18Q96SJ8 248 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 KRT12Q99456 494 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 SAMD15Q9P1V8 674 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 COL22A1Q8NFW1 1626 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-218ENST00000608440 PI4KAP2A4QPH2 592 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 TACC1O75410 805 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 CCNG1P51959 295 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 RNASELQ05823 741 aaKnown RBP13.78□□□□□ -0.2
CTCFL-218ENST00000608440 HDGFL1Q5TGJ6 251 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 MIGA2Q7L4E1 593 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 LRRC34Q8IZ02 419 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 PI4KAP1Q8N8J0 262 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 C1orf131Q8NDD1 294 aaKnown RBP13.78□□□□□ -0.2
CTCFL-218ENST00000608440 LINS1Q8NG48 757 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 KLHDC4Q8TBB5 520 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 FBF1Q8TES7 1133 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 AGXT2Q9BYV1 514 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 MTFR1LQ9H019 292 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 LRRC4CQ9HCJ2 640 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 SWAP70Q9UH65 585 aa13.78□□□□□ -0.2
CTCFL-218ENST00000608440 GOLGA6L10A0A0M3HER8 536 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 IL2RBP14784 551 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 ATP6V1C1P21283 382 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 GSTT1P30711 240 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 CYLC1P35663 651 aaPredicted RBP13.77□□□□□ -0.2
CTCFL-218ENST00000608440 USP46P62068 366 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 DEUP1Q05D60 604 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 TRIM14Q14142 442 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 SGSM1Q2NKQ1 1148 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 MCMDC2Q4G0Z9 681 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 DDX46Q7L014 1031 aaKnown RBP13.77□□□□□ -0.2
CTCFL-218ENST00000608440 LCA5Q86VQ0 697 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 STAMQ92783 540 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 ALG1Q9BT22 464 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 VCXQ9H320 206 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 NHEJ1Q9H9Q4 299 aaPredicted RBP13.77□□□□□ -0.2
CTCFL-218ENST00000608440 HYOU1Q9Y4L1 999 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 LRRC42Q9Y546 428 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 PKD1L3Q7Z443 1732 aa13.77□□□□□ -0.2
CTCFL-218ENST00000608440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.77□□□□□ -0.21
CTCFL-218ENST00000608440 H0Y3Z8 333 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 PDLIM1O00151 329 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 FLOT1O75955 427 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 ANXA1P04083 346 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 PAEPP09466 180 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 ITIH3Q06033 890 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 UAP1Q16222 522 aaPredicted RBP13.77□□□□□ -0.21
CTCFL-218ENST00000608440 OR52E8Q6IFG1 317 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 CCNJLQ8IV13 435 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 ANKRD13CQ8N6S4 541 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 PLCB1Q9NQ66 1216 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.77□□□□□ -0.21
CTCFL-218ENST00000608440 ZNF609O15014 1411 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 AFF2P51816 1311 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 KDM3BQ7LBC6 1761 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 SERPINB4P48594 390 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 CCDC15Q0P6D6 951 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 KRT71Q3SY84 523 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 KRT40Q6A162 431 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 RUFY4Q6ZNE9 571 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.21
CTCFL-218ENST00000608440 WHAMMQ8TF30 809 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms