RNA–Protein interactions for RNA: ENST00000608254.1

PTCHD1-AS-202, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 4 BASIC

Gene PTCHD1-AS, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-202ENST00000608254 FBXO16Q8IX29 292 aaPredicted RBP13.69□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 CRYGNQ8WXF5 182 aa13.69□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.69□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 UNC93B1Q9H1C4 597 aa13.69□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 FOXP1Q9H334 677 aaPredicted RBP13.69□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 FOXD4L1Q9NU39 408 aa13.69□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 SMCHD1A6NHR9 2005 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 HTTP42858 3142 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 H3BQV1 296 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 MSCO60682 206 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 AKR1A1P14550 325 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 USP11P51784 963 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 NR5A1Q13285 461 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 CCDC144BQ3MJ40 725 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 GNPTABQ3T906 1256 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 IFFO2Q5TF58 517 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 KCNV1Q6PIU1 500 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 NLRX1Q86UT6 975 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 TNS4Q8IZW8 715 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 TBCKQ8TEA7 893 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 SCFD2Q8WU76 684 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 TNFRSF25Q93038 417 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 INPP4AQ96PE3 977 aaPredicted RBP13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 RNF208Q9H0X6 261 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 PAK6Q9NQU5 681 aaPredicted RBP13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 PDGFCQ9NRA1 345 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 UBIAD1Q9Y5Z9 338 aa13.68□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 MAFGO15525 162 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 RGS20O76081 388 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 MYCP01106 439 aaPredicted RBP13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 TGFB3P10600 412 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 PDIA4P13667 645 aaKnown RBP13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 CAPN2P17655 700 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 ICAM3P32942 547 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 ZNF76P36508 570 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 ADCYAP1R1P41586 468 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 TNFAIP2Q03169 654 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 GNL2Q13823 731 aaKnown RBP13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 TTLL4Q14679 1199 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 CEP55Q53EZ4 464 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 SEPT14Q6ZU15 432 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 PIK3AP1Q6ZUJ8 805 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 GPRASP2Q96D09 838 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 ABHD8Q96I13 439 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 CDHR1Q96JP9 859 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 MXRA8Q9BRK3 442 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 WDR11Q9BZH6 1224 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 RTEL1Q9NZ71 1219 aa13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 DDX20Q9UHI6 824 aaKnown RBP13.67□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 SPATA31C2B4DYI2 1134 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 NKRFO15226 690 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 FIBPO43427 364 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 GJB1P08034 283 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 RARBP10826 455 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 ITGB5P18084 799 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 SYT1P21579 422 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 U2AF2P26368 475 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 CIITAP33076 1130 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 INF2Q27J81 1249 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 DUSP28Q4G0W2 176 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 LHX8Q68G74 356 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 CCDC62Q6P9F0 684 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 NIPA1Q7RTP0 329 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 NOSTRINQ8IVI9 506 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 ZFP91Q96JP5 570 aaPredicted RBP13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 TMEM106CQ9BVX2 250 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 JADE2Q9NQC1 790 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 MRVI1Q9Y6F6 885 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 MYH6P13533 1939 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 DOCK3Q8IZD9 2030 aa13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 RBBP6Q7Z6E9 1792 aaKnown RBP13.66□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 CYP3A7-CYP3A51PA0A087WV96 503 aa13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 MEIS1O00470 390 aa13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 DUSP11O75319 330 aaKnown RBP13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 TXNP10599 105 aaKnown RBP13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 SMPD1P17405 629 aa13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 CYP3A7P24462 503 aa13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 ANP32AP39687 249 aaKnown RBP13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 EARS2Q5JPH6 523 aaKnown RBP13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 MOXD1Q6UVY6 613 aa13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 NEK8Q86SG6 692 aa13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 DEFB118Q96PH6 123 aa13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 NAP1L4Q99733 375 aaKnown RBP13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 DDX41Q9UJV9 622 aaKnown RBP13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 GNEQ9Y223 722 aaKnown RBP13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 Q9Y3F1 56 aa13.65□□□□□ -0.22
PTCHD1-AS-202ENST00000608254 KIF28PB7ZC32 967 aa13.64□□□□□ -0.23
PTCHD1-AS-202ENST00000608254 FAM86B1E9PN63 330 aa13.64□□□□□ -0.23
PTCHD1-AS-202ENST00000608254 EDIL3O43854 480 aa13.64□□□□□ -0.23
PTCHD1-AS-202ENST00000608254 SGPL1O95470 568 aa13.64□□□□□ -0.23
PTCHD1-AS-202ENST00000608254 FAM86B2P0C5J1 330 aa13.64□□□□□ -0.23
PTCHD1-AS-202ENST00000608254 MTMR1Q13613 665 aa13.64□□□□□ -0.23
PTCHD1-AS-202ENST00000608254 MCTP1Q6DN14 999 aa13.64□□□□□ -0.23
PTCHD1-AS-202ENST00000608254 PPP4R3AQ6IN85 833 aa13.64□□□□□ -0.23
PTCHD1-AS-202ENST00000608254 CYP2W1Q8TAV3 490 aa13.64□□□□□ -0.23
PTCHD1-AS-202ENST00000608254 U2AF1L4Q8WU68 220 aaKnown RBP13.64□□□□□ -0.23
PTCHD1-AS-202ENST00000608254 SENP7Q9BQF6 1050 aa13.64□□□□□ -0.23
PTCHD1-AS-202ENST00000608254 LCTP09848 1927 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms