RNA–Protein interactions for RNA: ENST00000607427.1

CTSS-206, Transcript of cathepsin S, humanhuman

TSL 2

Gene CTSS, Length 390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-206ENST00000607427 DDX3XO00571 662 aaKnown RBP eCLIP6.54□□□□□ -1.36
CTSS-206ENST00000607427 PPM1BO75688 479 aa6.54□□□□□ -1.36
CTSS-206ENST00000607427 TGM1P22735 817 aa6.54□□□□□ -1.36
CTSS-206ENST00000607427 ITGA1P56199 1179 aa6.54□□□□□ -1.36
CTSS-206ENST00000607427 METTL16Q86W50 562 aaKnown RBP6.54□□□□□ -1.36
CTSS-206ENST00000607427 FAM26EQ8N5C1 309 aa6.54□□□□□ -1.36
CTSS-206ENST00000607427 ADCY4Q8NFM4 1077 aa6.54□□□□□ -1.36
CTSS-206ENST00000607427 DEF6Q9H4E7 631 aa6.54□□□□□ -1.36
CTSS-206ENST00000607427 SIT1Q9Y3P8 196 aa6.54□□□□□ -1.36
CTSS-206ENST00000607427 EPHX1P07099 455 aa6.53□□□□□ -1.36
CTSS-206ENST00000607427 EPHB4P54760 987 aa6.53□□□□□ -1.36
CTSS-206ENST00000607427 RBM10P98175 930 aaKnown RBP6.53□□□□□ -1.36
CTSS-206ENST00000607427 SPDYAQ5MJ70 313 aa6.53□□□□□ -1.36
CTSS-206ENST00000607427 ADAT2Q7Z6V5 191 aaKnown RBP6.53□□□□□ -1.36
CTSS-206ENST00000607427 MIB1Q86YT6 1006 aa6.53□□□□□ -1.36
CTSS-206ENST00000607427 ARHGEF39Q8N4T4 335 aa6.53□□□□□ -1.36
CTSS-206ENST00000607427 IGDCC4Q8TDY8 1250 aa6.53□□□□□ -1.36
CTSS-206ENST00000607427 GPRASP2Q96D09 838 aa6.53□□□□□ -1.36
CTSS-206ENST00000607427 RCC1LQ96I51 464 aaKnown RBP6.53□□□□□ -1.36
CTSS-206ENST00000607427 WWC2-AS2Q96NR7 200 aa6.53□□□□□ -1.36
CTSS-206ENST00000607427 PCDHB10Q9UN67 800 aa6.53□□□□□ -1.36
CTSS-206ENST00000607427 STXBP3O00186 592 aa6.52□□□□□ -1.37
CTSS-206ENST00000607427 MUSKO15146 869 aa6.52□□□□□ -1.37
CTSS-206ENST00000607427 SEPHS1P49903 392 aa6.52□□□□□ -1.37
CTSS-206ENST00000607427 MFAP1P55081 439 aaKnown RBP6.52□□□□□ -1.37
CTSS-206ENST00000607427 GRB10Q13322 594 aa6.52□□□□□ -1.37
CTSS-206ENST00000607427 KLHL6Q8WZ60 621 aa6.52□□□□□ -1.37
CTSS-206ENST00000607427 MBD6Q96DN6 1003 aa6.52□□□□□ -1.37
CTSS-206ENST00000607427 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.52□□□□□ -1.37
CTSS-206ENST00000607427 CGGBP1Q9UFW8 167 aaPredicted RBP6.52□□□□□ -1.37
CTSS-206ENST00000607427 TCAF1Q9Y4C2 921 aa6.52□□□□□ -1.37
CTSS-206ENST00000607427 BACE2Q9Y5Z0 518 aa6.52□□□□□ -1.37
CTSS-206ENST00000607427 TRBV23OR9-2A0A075B6M9 112 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 C2orf71A6NGG8 1288 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 PATE3B3GLJ2 98 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 VAMP4O75379 141 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 NTRK1P04629 796 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 ZNF28P17035 718 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 AMPD2Q01433 879 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 PKN3Q6P5Z2 889 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 CD300LDQ6UXZ3 194 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 STK32CQ86UX6 486 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 ZC3H18Q86VM9 953 aaKnown RBP6.51□□□□□ -1.37
CTSS-206ENST00000607427 DCP2Q8IU60 420 aaKnown RBP6.51□□□□□ -1.37
CTSS-206ENST00000607427 USP33Q8TEY7 942 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 FGD4Q96M96 766 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 SEMA4AQ9H3S1 761 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 C11orf21Q9P2W6 132 aa6.51□□□□□ -1.37
CTSS-206ENST00000607427 GJA8P48165 433 aa6.5□□□□□ -1.37
CTSS-206ENST00000607427 CASP7P55210 303 aa6.5□□□□□ -1.37
CTSS-206ENST00000607427 TGFB2P61812 414 aa6.5□□□□□ -1.37
CTSS-206ENST00000607427 FHL2Q14192 279 aa6.5□□□□□ -1.37
CTSS-206ENST00000607427 DPY19L1Q2PZI1 675 aa6.5□□□□□ -1.37
CTSS-206ENST00000607427 SHDQ96IW2 340 aa6.5□□□□□ -1.37
CTSS-206ENST00000607427 TESMINQ9Y4I5 508 aa6.5□□□□□ -1.37
CTSS-206ENST00000607427 NPHP3-ACAD11A0A0J9YXS1 232 aa6.49□□□□□ -1.37
CTSS-206ENST00000607427 PAMP19021 973 aa6.49□□□□□ -1.37
CTSS-206ENST00000607427 SMN1Q16637 294 aaKnown RBP6.49□□□□□ -1.37
CTSS-206ENST00000607427 CPNE8Q86YQ8 564 aa6.49□□□□□ -1.37
CTSS-206ENST00000607427 AP5M1Q9H0R1 490 aa6.49□□□□□ -1.37
CTSS-206ENST00000607427 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.49□□□□□ -1.37
CTSS-206ENST00000607427 ANKRD34BA5PLL1 514 aa6.48□□□□□ -1.37
CTSS-206ENST00000607427 CYP1A1P04798 512 aaPredicted RBP6.48□□□□□ -1.37
CTSS-206ENST00000607427 PPP2CBP62714 309 aa6.48□□□□□ -1.37
CTSS-206ENST00000607427 PPP2CAP67775 309 aa6.48□□□□□ -1.37
CTSS-206ENST00000607427 PRAMEF18Q5VWM3 479 aa6.48□□□□□ -1.37
CTSS-206ENST00000607427 NT5DC4Q86YG4 428 aa6.48□□□□□ -1.37
CTSS-206ENST00000607427 ZNF513Q8N8E2 541 aaPredicted RBP6.48□□□□□ -1.37
CTSS-206ENST00000607427 YTHDC1Q96MU7 727 aaKnown RBP6.48□□□□□ -1.37
CTSS-206ENST00000607427 ZNF341Q9BYN7 854 aa6.48□□□□□ -1.37
CTSS-206ENST00000607427 SUGT1Q9Y2Z0 365 aa6.48□□□□□ -1.37
CTSS-206ENST00000607427 NPHS1O60500 1241 aa6.47□□□□□ -1.37
CTSS-206ENST00000607427 FUCA1P04066 466 aa6.47□□□□□ -1.37
CTSS-206ENST00000607427 NASPP49321 788 aaPredicted RBP6.47□□□□□ -1.37
CTSS-206ENST00000607427 INHBEP58166 350 aa6.47□□□□□ -1.37
CTSS-206ENST00000607427 PURAQ00577 322 aaKnown RBP6.47□□□□□ -1.37
CTSS-206ENST00000607427 PPP2R5EQ16537 467 aa6.47□□□□□ -1.37
CTSS-206ENST00000607427 SLFN13Q68D06 897 aa6.47□□□□□ -1.37
CTSS-206ENST00000607427 KIAA1211LQ6NV74 962 aa6.47□□□□□ -1.37
CTSS-206ENST00000607427 ARHGEF18Q6ZSZ5 1173 aa6.47□□□□□ -1.37
CTSS-206ENST00000607427 PLEKHO2Q8TD55 490 aa6.47□□□□□ -1.37
CTSS-206ENST00000607427 SEC16BQ96JE7 1060 aa6.47□□□□□ -1.37
CTSS-206ENST00000607427 JADE2Q9NQC1 790 aa6.47□□□□□ -1.37
CTSS-206ENST00000607427 AKT3Q9Y243 479 aa6.47□□□□□ -1.37
CTSS-206ENST00000607427 C7orf72A4D263 438 aa6.46□□□□□ -1.38
CTSS-206ENST00000607427 SGSM2O43147 1006 aa6.46□□□□□ -1.38
CTSS-206ENST00000607427 ZNF623O75123 536 aa6.46□□□□□ -1.38
CTSS-206ENST00000607427 HDLBPQ00341 1268 aaKnown RBP6.46□□□□□ -1.38
CTSS-206ENST00000607427 ADAM9Q13443 819 aa6.46□□□□□ -1.38
CTSS-206ENST00000607427 VHLLQ6RSH7 139 aa6.46□□□□□ -1.38
CTSS-206ENST00000607427 ZNF575Q86XF7 245 aa6.46□□□□□ -1.38
CTSS-206ENST00000607427 FAM126BQ8IXS8 530 aa6.46□□□□□ -1.38
CTSS-206ENST00000607427 KBTBD2Q8IY47 623 aa6.46□□□□□ -1.38
CTSS-206ENST00000607427 CPLX3Q8WVH0 158 aa6.46□□□□□ -1.38
CTSS-206ENST00000607427 COPS5Q92905 334 aa6.46□□□□□ -1.38
CTSS-206ENST00000607427 EMC9Q9Y3B6 208 aa6.46□□□□□ -1.38
CTSS-206ENST00000607427 WDR33Q9C0J8 1336 aaKnown RBP6.46□□□□□ -1.38
CTSS-206ENST00000607427 NPIPB8E9PQR5 432 aa6.45□□□□□ -1.38
CTSS-206ENST00000607427 ZNF143P52747 638 aaPredicted RBP6.45□□□□□ -1.38
CTSS-206ENST00000607427 POMZP3Q6PJE2 187 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms