RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 RTN1Q16799 776 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 SLC35G1Q2M3R5 365 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 NFRKBQ6P4R8 1299 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 APOA5Q6Q788 366 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 BLOC1S2Q6QNY1 142 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 TMTC3Q6ZXV5 915 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 CCDC82Q8N4S0 544 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 SRBD1Q8N5C6 995 aaKnown RBP16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 COPS5Q92905 334 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 LRCH3Q96II8 777 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 HIPK3Q9H422 1215 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 PSTPIP2Q9H939 334 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 EHMT1Q9H9B1 1298 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 DDX41Q9UJV9 622 aaKnown RBP16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 NOD1Q9Y239 953 aa16.6■□□□□ 0.25
PKNOX1-210ENST00000607049 LRRC37A2A6NM11 1700 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 MYH6P13533 1939 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 SOX1O00570 391 aaPredicted RBP16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 ARIH2O95376 493 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 CD4P01730 458 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 HSPA4P34932 840 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 RCAN1P53805 252 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 CHMP4BP1P59074 171 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 EXOSC10Q01780 885 aaKnown RBP16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 PTPN11Q06124 597 aaPredicted RBP16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 SHHQ15465 462 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 XRRA1Q6P2D8 792 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 RASEFQ8IZ41 740 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 AFG1LQ8WV93 481 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 EMID1Q96A84 441 aaPredicted RBP16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 RNPC3Q96LT9 517 aaKnown RBP16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 JAKMIP1Q96N16 626 aaKnown RBP16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 KATNAL1Q9BW62 490 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 PPP1R12CQ9BZL4 782 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 ALDH8A1Q9H2A2 487 aaPredicted RBP16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 MTIF3Q9H2K0 278 aaKnown RBP16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 DNAH12Q6ZR08 3092 aa16.59■□□□□ 0.25
PKNOX1-210ENST00000607049 KLF18A0A0U1RQI7 1052 aa16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 SPDYE3A6NKU9 549 aa16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 PIK3CDO00329 1044 aa16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 NBPF20Q3BBV1 942 aa16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 PSRC1Q6PGN9 363 aaPredicted RBP16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 HEATR3Q7Z4Q2 680 aa16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 RAB11FIP4Q86YS3 637 aa16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 TEX2Q8IWB9 1127 aa16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 CMTR1Q8N1G2 835 aaKnown RBP16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 PPTC7Q8NI37 304 aa16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 TRPV6Q9H1D0 765 aa16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 MLXIPQ9HAP2 919 aa16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 LCTP09848 1927 aa16.58■□□□□ 0.24
PKNOX1-210ENST00000607049 GRIN2DO15399 1336 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 GOLGA8AA7E2F4 631 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 GOLGA8BA8MQT2 603 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 hCG_1984214I3L0E3 225 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 B4GALT4O60513 344 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 EIF5BO60841 1220 aaKnown RBP16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 MMP3P08254 477 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 ITGB8P26012 769 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 ARHGAP1Q07960 439 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 ADCK5Q3MIX3 580 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 NLRX1Q86UT6 975 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 RPUSD2Q8IZ73 545 aaKnown RBP16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 ZNF713Q8N859 430 aaPredicted RBP16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 RETREG2Q8NC44 543 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 TCEANC2Q96MN5 208 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 GLT8D2Q9H1C3 349 aa16.57■□□□□ 0.24
PKNOX1-210ENST00000607049 NOP56O00567 594 aaKnown RBP16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 PPFIA4O75335 1185 aa16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 CYP2C18P33260 490 aa16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 METAP2P50579 478 aaKnown RBP eCLIP16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 NEDD9Q14511 834 aa16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 C9orf50Q5SZB4 431 aa16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 DEFB123Q8N688 67 aa16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 CCDC155Q8N6L0 562 aa16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 C7orf31Q8N865 590 aa16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 KCNB2Q92953 911 aa16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 CDHR1Q96JP9 859 aa16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 SPATA33Q96N06 139 aa16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 SNX14Q9Y5W7 946 aa16.56■□□□□ 0.24
PKNOX1-210ENST00000607049 FIBPO43427 364 aa16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 GGPS1O95749 300 aa16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 CSF2RAP15509 400 aa16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 NAPAP54920 295 aa16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 SMAD3P84022 425 aaKnown RBP16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 AKAP17AQ02040 695 aaKnown RBP16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 BFSP2Q13515 415 aa16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 CELF3Q5SZQ8 465 aaKnown RBP16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 PCNX4Q63HM2 1172 aa16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 PPP1R18Q6NYC8 613 aa16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 USP17L6PQ6QN14 398 aa16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 GIMAP8Q8ND71 665 aaPredicted RBP16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 BRPF3Q9ULD4 1205 aa16.55■□□□□ 0.24
PKNOX1-210ENST00000607049 BAZ2BQ9UIF8 2168 aaKnown RBP16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 hCG_1642624A0A1W2PR95 340 aa16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 ZNF697Q5TEC3 545 aa16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 MYSM1Q5VVJ2 828 aa16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 FAM109BQ6ICB4 259 aaPredicted RBP16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 Q6ZUG5 572 aa16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 IL31RAQ8NI17 732 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms