RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 XRCC5P13010 732 aaKnown RBP8.75□□□□□ -1.01
MSH6-211ENST00000606499 ATP2B1P20020 1258 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 CYP2C19P33261 490 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 TOB1P50616 345 aaPredicted RBP8.75□□□□□ -1.01
MSH6-211ENST00000606499 PDE4DQ08499 809 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 IRF5Q13568 498 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 ARHGEF6Q15052 776 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 LETM2Q2VYF4 491 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 MYSM1Q5VVJ2 828 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 MAMDC4Q6UXC1 1216 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 EEPD1Q7L9B9 569 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 BRAPQ7Z569 592 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 NEK8Q86SG6 692 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 VSIG10LQ86VR7 867 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 FBXO16Q8IX29 292 aaPredicted RBP8.75□□□□□ -1.01
MSH6-211ENST00000606499 CYP2W1Q8TAV3 490 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 RAET1EQ8TD07 263 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 MORC4Q8TE76 937 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 CHAMP1Q96JM3 812 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 IWS1Q96ST2 819 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 TINF2Q9BSI4 451 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 FTOQ9C0B1 505 aaKnown RBP eCLIP8.75□□□□□ -1.01
MSH6-211ENST00000606499 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.75□□□□□ -1.01
MSH6-211ENST00000606499 RTEL1Q9NZ71 1219 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 SYNGAP1Q96PV0 1343 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 IGLV3-22A0A075B6J6 115 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 ASB14A6NK59 587 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 SLC37A4O43826 429 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 ADCY3O60266 1144 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 CCNT1O60563 726 aaKnown RBP8.74□□□□□ -1.01
MSH6-211ENST00000606499 RGS20O76081 388 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 SNAI1O95863 264 aaPredicted RBP8.74□□□□□ -1.01
MSH6-211ENST00000606499 IGHA2P01877 340 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 CYP3A4P08684 503 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 PDIA4P13667 645 aaKnown RBP8.74□□□□□ -1.01
MSH6-211ENST00000606499 ITGB5P18084 799 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 HOXD10P28358 340 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 ZNF76P36508 570 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 PRMT2P55345 433 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 NUCB2P80303 420 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 TRIM32Q13049 653 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 STXBP2Q15833 593 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 TTC38Q5R3I4 469 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 OLFML2BQ68BL8 750 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 CTU1Q7Z7A3 348 aaKnown RBP8.74□□□□□ -1.01
MSH6-211ENST00000606499 INPP4AQ96PE3 977 aaPredicted RBP8.74□□□□□ -1.01
MSH6-211ENST00000606499 UIMC1Q96RL1 719 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 MPHOSPH6Q99547 160 aaKnown RBP8.74□□□□□ -1.01
MSH6-211ENST00000606499 WDR11Q9BZH6 1224 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 KATNBL1Q9H079 304 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 ZSCAN16Q9H4T2 348 aaPredicted RBP8.74□□□□□ -1.01
MSH6-211ENST00000606499 CHMP5Q9NZZ3 219 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 CIZ1Q9ULV3 898 aaPredicted RBP8.74□□□□□ -1.01
MSH6-211ENST00000606499 NOL7Q9UMY1 257 aaKnown RBP8.74□□□□□ -1.01
MSH6-211ENST00000606499 PCDHB6Q9Y5E3 794 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 UBIAD1Q9Y5Z9 338 aa8.74□□□□□ -1.01
MSH6-211ENST00000606499 LOC102724159A0A0B4J2E5 919 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 B4DLN1 442 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 EIF3JO75822 258 aaKnown RBP8.73□□□□□ -1.01
MSH6-211ENST00000606499 CIITAP33076 1130 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 MCM7P33993 719 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 USP11P51784 963 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 SEMA3FQ13275 785 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 MTMR1Q13613 665 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 PWP2Q15269 919 aaKnown RBP8.73□□□□□ -1.01
MSH6-211ENST00000606499 CEP55Q53EZ4 464 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 PRR16Q569H4 304 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 RILPL1Q5EBL4 403 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 PRAMEF19Q5SWL8 479 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 TMEM63BQ5T3F8 832 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 XRRA1Q6P2D8 792 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 MSL3Q8N5Y2 521 aaKnown RBP8.73□□□□□ -1.01
MSH6-211ENST00000606499 SLAIN1Q8ND83 568 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 TRPV1Q8NER1 839 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 SH3TC2Q8TF17 1288 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 LENG9Q96B70 501 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 MXRA8Q9BRK3 442 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 PDGFCQ9NRA1 345 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 PKD2L1Q9P0L9 805 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 DDX25Q9UHL0 483 aaKnown RBP8.73□□□□□ -1.01
MSH6-211ENST00000606499 ZHX1Q9UKY1 873 aaPredicted RBP8.73□□□□□ -1.01
MSH6-211ENST00000606499 PTPN22Q9Y2R2 807 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 MRVI1Q9Y6F6 885 aa8.73□□□□□ -1.01
MSH6-211ENST00000606499 TCHHQ07283 1943 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 CYP3A7-CYP3A51PA0A087WV96 503 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 MEIS1O00470 390 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 ADCY6O43306 1168 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 SORBS3O60504 671 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 NEMFO60524 1076 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 STAM2O75886 525 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 ARIH2O95376 493 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 HMGCRP04035 888 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 INHAP05111 366 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 ATXN8OSP0DMR3 200 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 ARP10275 920 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 CYBAP13498 195 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 PRKAR2AP13861 404 aaKnown RBP8.72□□□□□ -1.01
MSH6-211ENST00000606499 GCFC2P16383 781 aaKnown RBP8.72□□□□□ -1.01
MSH6-211ENST00000606499 PTGS1P23219 599 aa8.72□□□□□ -1.01
MSH6-211ENST00000606499 CYP3A7P24462 503 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms