RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 CCDC175P0C221 793 aa22.18■■□□□ 1.14
MMP28-201ENST00000605424 DPEP1P16444 411 aa22.18■■□□□ 1.14
MMP28-201ENST00000605424 RRP1BQ14684 758 aaKnown RBP22.18■■□□□ 1.14
MMP28-201ENST00000605424 CENPPQ6IPU0 288 aa22.18■■□□□ 1.14
MMP28-201ENST00000605424 MB21D1Q8N884 522 aa22.18■■□□□ 1.14
MMP28-201ENST00000605424 ZNF507Q8TCN5 953 aa22.18■■□□□ 1.14
MMP28-201ENST00000605424 TSC1Q92574 1164 aa22.18■■□□□ 1.14
MMP28-201ENST00000605424 ERO1AQ96HE7 468 aa22.18■■□□□ 1.14
MMP28-201ENST00000605424 GOPCQ9HD26 462 aa22.18■■□□□ 1.14
MMP28-201ENST00000605424 ZNRF3Q9ULT6 936 aa22.18■■□□□ 1.14
MMP28-201ENST00000605424 SLU7O95391 586 aaKnown RBP22.18■■□□□ 1.14
MMP28-201ENST00000605424 Q4G0T1 1027 aa22.18■■□□□ 1.14
MMP28-201ENST00000605424 FAM83AQ86UY5 434 aa22.18■■□□□ 1.14
MMP28-201ENST00000605424 GUF1Q8N442 669 aaKnown RBP22.18■■□□□ 1.14
MMP28-201ENST00000605424 CPLX3Q8WVH0 158 aa22.18■■□□□ 1.14
MMP28-201ENST00000605424 A0A1W2PRG0 241 aa22.17■■□□□ 1.14
MMP28-201ENST00000605424 FGFR1OPO95684 399 aaKnown RBP22.17■■□□□ 1.14
MMP28-201ENST00000605424 FCER1AP12319 257 aa22.17■■□□□ 1.14
MMP28-201ENST00000605424 FXR1P51114 621 aaKnown RBP eCLIP22.17■■□□□ 1.14
MMP28-201ENST00000605424 ARHGAP4P98171 946 aa22.17■■□□□ 1.14
MMP28-201ENST00000605424 ANKRD40Q6AI12 368 aa22.17■■□□□ 1.14
MMP28-201ENST00000605424 TOGARAM2Q6ZUX3 1019 aa22.17■■□□□ 1.14
MMP28-201ENST00000605424 KIAA0895Q8NCT3 520 aa22.17■■□□□ 1.14
MMP28-201ENST00000605424 NUP88Q99567 741 aaPredicted RBP22.17■■□□□ 1.14
MMP28-201ENST00000605424 NUDT12Q9BQG2 462 aa22.17■■□□□ 1.14
MMP28-201ENST00000605424 ZNF277Q9NRM2 450 aaPredicted RBP22.17■■□□□ 1.14
MMP28-201ENST00000605424 BMP2KQ9NSY1 1161 aaPredicted RBP22.17■■□□□ 1.14
MMP28-201ENST00000605424 SPDYE3A6NKU9 549 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 PIK3CDO00329 1044 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 SREBF1P36956 1147 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 EHHADHQ08426 723 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 CREBRFQ8IUR6 639 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 NLGN2Q8NFZ4 835 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 ABHD10Q9NUJ1 306 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 CNTNAP1P78357 1384 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 CLRN2A0PK11 232 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 CIITAP33076 1130 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 STAT2P52630 851 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 NIM1KQ8IY84 436 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 DDX12PQ92771 950 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 TUBGCP2Q9BSJ2 902 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 DNAI1Q9UI46 699 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 PRR12Q9ULL5 1215 aa22.16■■□□□ 1.14
MMP28-201ENST00000605424 PLA2G6O60733 806 aa22.15■■□□□ 1.14
MMP28-201ENST00000605424 LRRC63Q05C16 580 aa22.15■■□□□ 1.14
MMP28-201ENST00000605424 NCBP1Q09161 790 aaKnown RBP22.15■■□□□ 1.14
MMP28-201ENST00000605424 CYP26C1Q6V0L0 522 aa22.15■■□□□ 1.14
MMP28-201ENST00000605424 RETREG2Q8NC44 543 aa22.15■■□□□ 1.14
MMP28-201ENST00000605424 IQCDQ96DY2 449 aa22.15■■□□□ 1.14
MMP28-201ENST00000605424 FAM20AQ96MK3 541 aa22.15■■□□□ 1.14
MMP28-201ENST00000605424 NUP58Q9BVL2 599 aa22.15■■□□□ 1.14
MMP28-201ENST00000605424 SH2D4AQ9H788 454 aa22.15■■□□□ 1.14
MMP28-201ENST00000605424 ZBTB21Q9ULJ3 1066 aa22.15■■□□□ 1.14
MMP28-201ENST00000605424 ADGRG1Q9Y653 693 aa22.15■■□□□ 1.14
MMP28-201ENST00000605424 ABCB11O95342 1321 aa22.15■■□□□ 1.14
MMP28-201ENST00000605424 SOWAHDA6NJG2 315 aa22.14■■□□□ 1.14
MMP28-201ENST00000605424 HAUS3Q68CZ6 603 aa22.14■■□□□ 1.14
MMP28-201ENST00000605424 SLC39A2Q9NP94 309 aa22.14■■□□□ 1.14
MMP28-201ENST00000605424 CYP3A4P08684 503 aa22.14■■□□□ 1.13
MMP28-201ENST00000605424 DYMQ7RTS9 669 aa22.14■■□□□ 1.13
MMP28-201ENST00000605424 KCNK18Q7Z418 384 aa22.14■■□□□ 1.13
MMP28-201ENST00000605424 ETNPPLQ8TBG4 499 aa22.14■■□□□ 1.13
MMP28-201ENST00000605424 CHURC1Q8WUH1 139 aa22.14■■□□□ 1.13
MMP28-201ENST00000605424 CNOT6LQ96LI5 555 aaKnown RBP22.14■■□□□ 1.13
MMP28-201ENST00000605424 ZNF215Q9UL58 517 aaPredicted RBP22.14■■□□□ 1.13
MMP28-201ENST00000605424 KRT9P35527 623 aa22.13■■□□□ 1.13
MMP28-201ENST00000605424 TGFB2P61812 414 aa22.13■■□□□ 1.13
MMP28-201ENST00000605424 ECM1Q16610 540 aa22.13■■□□□ 1.13
MMP28-201ENST00000605424 RAD9BQ6WBX8 426 aa22.13■■□□□ 1.13
MMP28-201ENST00000605424 KCTD17Q8N5Z5 321 aa22.13■■□□□ 1.13
MMP28-201ENST00000605424 ERMNQ8TAM6 284 aa22.13■■□□□ 1.13
MMP28-201ENST00000605424 SEMA6BQ9H3T3 888 aa22.13■■□□□ 1.13
MMP28-201ENST00000605424 CAPN11Q9UMQ6 739 aa22.13■■□□□ 1.13
MMP28-201ENST00000605424 COL4A5P29400 1685 aa22.12■■□□□ 1.13
MMP28-201ENST00000605424 PRKCSHP14314 528 aaPredicted RBP22.12■■□□□ 1.13
MMP28-201ENST00000605424 MAP3K10Q02779 954 aa22.12■■□□□ 1.13
MMP28-201ENST00000605424 USH1GQ495M9 461 aa22.12■■□□□ 1.13
MMP28-201ENST00000605424 OR8K1Q8NGG5 319 aa22.12■■□□□ 1.13
MMP28-201ENST00000605424 DNAJC19Q96DA6 116 aa22.12■■□□□ 1.13
MMP28-201ENST00000605424 ZBED3Q96IU2 234 aaPredicted RBP22.12■■□□□ 1.13
MMP28-201ENST00000605424 FHDC1Q9C0D6 1143 aaPredicted RBP22.12■■□□□ 1.13
MMP28-201ENST00000605424 CD2APQ9Y5K6 639 aa22.12■■□□□ 1.13
MMP28-201ENST00000605424 IDEP14735 1019 aa22.12■■□□□ 1.13
MMP28-201ENST00000605424 ZBTB12Q9Y330 459 aaPredicted RBP22.12■■□□□ 1.13
MMP28-201ENST00000605424 LUC7L2Q9Y383 392 aaKnown RBP22.12■■□□□ 1.13
MMP28-201ENST00000605424 CASQ1P31415 396 aa22.11■■□□□ 1.13
MMP28-201ENST00000605424 ECE1P42892 770 aa22.11■■□□□ 1.13
MMP28-201ENST00000605424 MTIF2P46199 727 aaKnown RBP22.11■■□□□ 1.13
MMP28-201ENST00000605424 MTF1Q14872 753 aa22.11■■□□□ 1.13
MMP28-201ENST00000605424 TSR1Q2NL82 804 aaKnown RBP22.11■■□□□ 1.13
MMP28-201ENST00000605424 FAM160B2Q86V87 743 aa22.11■■□□□ 1.13
MMP28-201ENST00000605424 DNAJC7Q99615 494 aa22.11■■□□□ 1.13
MMP28-201ENST00000605424 VCPKMTQ9H867 229 aa22.11■■□□□ 1.13
MMP28-201ENST00000605424 PIM2Q9P1W9 311 aa22.11■■□□□ 1.13
MMP28-201ENST00000605424 KIAA1024Q9UPX6 916 aa22.11■■□□□ 1.13
MMP28-201ENST00000605424 PITPNM2Q9BZ72 1349 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 OPLAHO14841 1288 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 SNAP25P60880 206 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 GNG11P61952 73 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 TBC1D8BQ0IIM8 1120 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms