RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 LRRC2Q9BYS8 371 aa20.94■□□□□ 0.94
CCDC12-208ENST00000603885 MTMR10Q9NXD2 777 aa20.94■□□□□ 0.94
CCDC12-208ENST00000603885 PLEKHA8P1O95397 391 aa20.93■□□□□ 0.94
CCDC12-208ENST00000603885 MMP3P08254 477 aa20.93■□□□□ 0.94
CCDC12-208ENST00000603885 RXRAP19793 462 aa20.93■□□□□ 0.94
CCDC12-208ENST00000603885 NBPF20Q3BBV1 942 aa20.93■□□□□ 0.94
CCDC12-208ENST00000603885 FAM47CQ5HY64 1035 aa20.93■□□□□ 0.94
CCDC12-208ENST00000603885 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.93■□□□□ 0.942e-8■■■■□ 25.3
CCDC12-208ENST00000603885 NOC4LQ9BVI4 516 aaKnown RBP20.93■□□□□ 0.94
CCDC12-208ENST00000603885 DDX41Q9UJV9 622 aaKnown RBP20.93■□□□□ 0.94
CCDC12-208ENST00000603885 CCND2P30279 289 aa20.92■□□□□ 0.94
CCDC12-208ENST00000603885 ZNF697Q5TEC3 545 aa20.92■□□□□ 0.94
CCDC12-208ENST00000603885 NFRKBQ6P4R8 1299 aa20.92■□□□□ 0.94
CCDC12-208ENST00000603885 PSRC1Q6PGN9 363 aaPredicted RBP20.92■□□□□ 0.94
CCDC12-208ENST00000603885 KCNV1Q6PIU1 500 aa20.92■□□□□ 0.94
CCDC12-208ENST00000603885 SYNE3Q6ZMZ3 975 aa20.92■□□□□ 0.94
CCDC12-208ENST00000603885 VSIG10LQ86VR7 867 aa20.92■□□□□ 0.94
CCDC12-208ENST00000603885 SGMS1Q86VZ5 419 aa20.92■□□□□ 0.94
CCDC12-208ENST00000603885 SRBD1Q8N5C6 995 aaKnown RBP20.92■□□□□ 0.94
CCDC12-208ENST00000603885 EMID1Q96A84 441 aaPredicted RBP20.92■□□□□ 0.94
CCDC12-208ENST00000603885 TRMT13Q9NUP7 481 aaKnown RBP20.92■□□□□ 0.94
CCDC12-208ENST00000603885 NEFLP07196 543 aa20.91■□□□□ 0.94
CCDC12-208ENST00000603885 CASTP20810 708 aaKnown RBP20.91■□□□□ 0.94
CCDC12-208ENST00000603885 PTPN11Q06124 597 aaPredicted RBP20.91■□□□□ 0.94
CCDC12-208ENST00000603885 LAMC2Q13753 1193 aa20.91■□□□□ 0.94
CCDC12-208ENST00000603885 KRT32Q14532 448 aa20.91■□□□□ 0.94
CCDC12-208ENST00000603885 TSGA10IPQ3SY00 556 aa20.91■□□□□ 0.94
CCDC12-208ENST00000603885 UMODL1Q5DID0 1318 aa20.91■□□□□ 0.94
CCDC12-208ENST00000603885 TMEM240Q5SV17 173 aa20.91■□□□□ 0.94
CCDC12-208ENST00000603885 IL31RAQ8NI17 732 aa20.91■□□□□ 0.94
CCDC12-208ENST00000603885 IL23AQ9NPF7 189 aa20.91■□□□□ 0.94
CCDC12-208ENST00000603885 COL6A3P12111 3177 aa20.9■□□□□ 0.94
CCDC12-208ENST00000603885 RGS20O76081 388 aa20.9■□□□□ 0.94
CCDC12-208ENST00000603885 ACRP10323 421 aa20.9■□□□□ 0.94
CCDC12-208ENST00000603885 CCL23P55773 120 aa20.9■□□□□ 0.94
CCDC12-208ENST00000603885 DGKDQ16760 1214 aa20.9■□□□□ 0.94
CCDC12-208ENST00000603885 C16orf59Q7L2K0 433 aa20.9■□□□□ 0.94
CCDC12-208ENST00000603885 DHX32Q7L7V1 743 aaKnown RBP20.9■□□□□ 0.94
CCDC12-208ENST00000603885 MICU3Q86XE3 530 aa20.9■□□□□ 0.94
CCDC12-208ENST00000603885 RAB11FIP4Q86YS3 637 aa20.9■□□□□ 0.94
CCDC12-208ENST00000603885 DHX37Q8IY37 1157 aaKnown RBP20.9■□□□□ 0.94
CCDC12-208ENST00000603885 CMTR1Q8N1G2 835 aaKnown RBP20.9■□□□□ 0.94
CCDC12-208ENST00000603885 FANCBQ8NB91 859 aa20.9■□□□□ 0.94
CCDC12-208ENST00000603885 CUL5Q93034 780 aa20.9■□□□□ 0.94
CCDC12-208ENST00000603885 FRMPD4Q14CM0 1322 aa20.89■□□□□ 0.93
CCDC12-208ENST00000603885 TGFB3P10600 412 aa20.89■□□□□ 0.93
CCDC12-208ENST00000603885 CYP2C9P11712 490 aa20.89■□□□□ 0.93
CCDC12-208ENST00000603885 CHMP4BP1P59074 171 aa20.89■□□□□ 0.93
CCDC12-208ENST00000603885 EXOSC10Q01780 885 aaKnown RBP20.89■□□□□ 0.93
CCDC12-208ENST00000603885 TMTC3Q6ZXV5 915 aa20.89■□□□□ 0.93
CCDC12-208ENST00000603885 RASEFQ8IZ41 740 aa20.89■□□□□ 0.93
CCDC12-208ENST00000603885 PPTC7Q8NI37 304 aa20.89■□□□□ 0.93
CCDC12-208ENST00000603885 SMARCC2Q8TAQ2 1214 aa20.89■□□□□ 0.93
CCDC12-208ENST00000603885 WNT8AQ9H1J5 351 aa20.89■□□□□ 0.93
CCDC12-208ENST00000603885 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.88■□□□□ 0.93
CCDC12-208ENST00000603885 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.88■□□□□ 0.93
CCDC12-208ENST00000603885 PIK3CDO00329 1044 aa20.88■□□□□ 0.93
CCDC12-208ENST00000603885 HMGB1P09429 215 aaKnown RBP20.88■□□□□ 0.93
CCDC12-208ENST00000603885 ADCK5Q3MIX3 580 aa20.88■□□□□ 0.93
CCDC12-208ENST00000603885 GNPTABQ3T906 1256 aa20.88■□□□□ 0.93
CCDC12-208ENST00000603885 APOA5Q6Q788 366 aa20.88■□□□□ 0.93
CCDC12-208ENST00000603885 ZNF365Q70YC5 407 aa20.88■□□□□ 0.93
CCDC12-208ENST00000603885 PPP1R13LQ8WUF5 828 aa20.88■□□□□ 0.93
CCDC12-208ENST00000603885 TCEANC2Q96MN5 208 aa20.88■□□□□ 0.93
CCDC12-208ENST00000603885 FAM161BQ96MY7 647 aa20.88■□□□□ 0.93
CCDC12-208ENST00000603885 STXBP5LQ9Y2K9 1186 aa20.88■□□□□ 0.93
CCDC12-208ENST00000603885 STAM2O75886 525 aa20.87■□□□□ 0.93
CCDC12-208ENST00000603885 GGPS1O95749 300 aa20.87■□□□□ 0.93
CCDC12-208ENST00000603885 CELF3Q5SZQ8 465 aaKnown RBP20.87■□□□□ 0.93
CCDC12-208ENST00000603885 MYSM1Q5VVJ2 828 aa20.87■□□□□ 0.93
CCDC12-208ENST00000603885 USP17L6PQ6QN14 398 aa20.87■□□□□ 0.93
CCDC12-208ENST00000603885 CCDC82Q8N4S0 544 aa20.87■□□□□ 0.93
CCDC12-208ENST00000603885 KAT2BQ92831 832 aa20.87■□□□□ 0.93
CCDC12-208ENST00000603885 ZFP91Q96JP5 570 aaPredicted RBP20.87■□□□□ 0.93
CCDC12-208ENST00000603885 KATNAL1Q9BW62 490 aa20.87■□□□□ 0.93
CCDC12-208ENST00000603885 MTIF3Q9H2K0 278 aaKnown RBP20.87■□□□□ 0.93
CCDC12-208ENST00000603885 RBM28Q9NW13 759 aaKnown RBP20.87■□□□□ 0.93
CCDC12-208ENST00000603885 NOD1Q9Y239 953 aa20.87■□□□□ 0.93
CCDC12-208ENST00000603885 MEIS2O14770 477 aa20.86■□□□□ 0.93
CCDC12-208ENST00000603885 FGBP02675 491 aa20.86■□□□□ 0.93
CCDC12-208ENST00000603885 UBA1P22314 1058 aaKnown RBP20.86■□□□□ 0.93
CCDC12-208ENST00000603885 RASIP1Q5U651 963 aa20.86■□□□□ 0.93
CCDC12-208ENST00000603885 SESTD1Q86VW0 696 aa20.86■□□□□ 0.93
CCDC12-208ENST00000603885 RPUSD2Q8IZ73 545 aaKnown RBP20.86■□□□□ 0.93
CCDC12-208ENST00000603885 SPATA33Q96N06 139 aa20.86■□□□□ 0.93
CCDC12-208ENST00000603885 GUCD1Q96NT3 240 aa20.86■□□□□ 0.93
CCDC12-208ENST00000603885 MYH7BA7E2Y1 1941 aa20.86■□□□□ 0.93
CCDC12-208ENST00000603885 TMEM265A0A087WTH1 108 aa20.85■□□□□ 0.93
CCDC12-208ENST00000603885 hCG_1642624A0A1W2PR95 340 aa20.85■□□□□ 0.93
CCDC12-208ENST00000603885 ZBTB43O43298 467 aa20.85■□□□□ 0.93
CCDC12-208ENST00000603885 MRPS9P82933 396 aaKnown RBP20.85■□□□□ 0.93
CCDC12-208ENST00000603885 RTN1Q16799 776 aa20.85■□□□□ 0.93
CCDC12-208ENST00000603885 HERVK_113Q902F9 699 aa20.85■□□□□ 0.93
CCDC12-208ENST00000603885 SCLYQ96I15 445 aa20.85■□□□□ 0.93
CCDC12-208ENST00000603885 INPP4AQ96PE3 977 aaPredicted RBP20.85■□□□□ 0.93
CCDC12-208ENST00000603885 SEMA6BQ9H3T3 888 aa20.85■□□□□ 0.93
CCDC12-208ENST00000603885 PSTPIP2Q9H939 334 aa20.85■□□□□ 0.93
CCDC12-208ENST00000603885 MLXIPQ9HAP2 919 aa20.85■□□□□ 0.93
CCDC12-208ENST00000603885 PITPNM1O00562 1244 aa20.84■□□□□ 0.93
CCDC12-208ENST00000603885 SORBS3O60504 671 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms