RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 GOLGA8FQ08AF8 430 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 GOLGA8DPQ0D2H9 430 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 C16orf87Q6PH81 154 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 KRT26Q7Z3Y9 468 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 ZNF653Q96CK0 615 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 SERPINI1Q99574 410 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 POLR2MP0CAP2 368 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 ADCY1Q08828 1119 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 CHURC1Q8WUH1 139 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 CFAP36Q96G28 342 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 TRAIPQ9BWF2 469 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 CARD14Q9BXL6 1004 aa10.41□□□□□ -0.74
CSMD1-217ENST00000602723 LRRIQ4A6NIV6 560 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 CHL1O00533 1208 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 HNRNPDLO14979 420 aaKnown RBP10.4□□□□□ -0.74
CSMD1-217ENST00000602723 SORBS3O60504 671 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 GUCY2CP25092 1073 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 PTH1RQ03431 593 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 GNPTABQ3T906 1256 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 MCTP2Q6DN12 878 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 KPNA2P52292 529 aaKnown RBP10.4□□□□□ -0.74
CSMD1-217ENST00000602723 MFAP3P55082 362 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 E2F4Q16254 413 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 TCP11X2Q5H9J9 407 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 C10orf76Q5T2E6 689 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 POLR1AO95602 1720 aaPredicted RBP10.4□□□□□ -0.74
CSMD1-217ENST00000602723 KIAA0556O60303 1618 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 NR2F2P24468 414 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 CTSWP56202 376 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 NEURL1BA8MQ27 555 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 MAN1A2O60476 641 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 LPXNO60711 386 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 PLS3P13797 630 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 CUL1Q13616 776 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 ARMCX5Q6P1M9 558 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 KLC3Q6P597 504 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 TSC22D3Q99576 134 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 LAD1O00515 517 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 RASGRF2O14827 1237 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 PDE6AP16499 860 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 PTK2Q05397 1052 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 SLMAPQ14BN4 828 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 GRAMD1BQ3KR37 738 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 FAM26FQ5R3K3 315 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 PNMA1Q8ND90 353 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 CCNL1Q9UK58 526 aaPredicted RBP10.4□□□□□ -0.74
CSMD1-217ENST00000602723 ODR4Q5SWX8 454 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 SPOPLQ6IQ16 392 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 ATP6V1E2Q96A05 226 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 SLC52A2Q9HAB3 445 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 CCPG1Q9ULG6 757 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 ABCC2Q92887 1545 aa10.4□□□□□ -0.74
CSMD1-217ENST00000602723 HNRNPCL2B2RXH8 293 aa10.4□□□□□ -0.75
CSMD1-217ENST00000602723 HNRNPCL1O60812 293 aaKnown RBP10.4□□□□□ -0.75
CSMD1-217ENST00000602723 COBLO75128 1261 aa10.4□□□□□ -0.75
CSMD1-217ENST00000602723 LRRN2O75325 713 aa10.4□□□□□ -0.75
CSMD1-217ENST00000602723 IFRD2Q12894 506 aaPredicted RBP10.4□□□□□ -0.75
CSMD1-217ENST00000602723 SESTD1Q86VW0 696 aa10.4□□□□□ -0.75
CSMD1-217ENST00000602723 MT-ND3P03897 115 aa10.4□□□□□ -0.75
CSMD1-217ENST00000602723 SCRN1Q12765 414 aa10.4□□□□□ -0.75
CSMD1-217ENST00000602723 MYLK4Q86YV6 388 aaPredicted RBP10.4□□□□□ -0.75
CSMD1-217ENST00000602723 RNF169Q8NCN4 708 aa10.4□□□□□ -0.75
CSMD1-217ENST00000602723 FGFR1OP2Q9NVK5 253 aa10.4□□□□□ -0.75
CSMD1-217ENST00000602723 KIAA1024Q9UPX6 916 aa10.4□□□□□ -0.75
CSMD1-217ENST00000602723 PBKQ96KB5 322 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 RBL2Q08999 1139 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 FAM8A1Q9UBU6 413 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 MYOM2P54296 1465 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 KCTD6Q8NC69 237 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 SUGCTQ9HAC7 445 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 PALD1Q9ULE6 856 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 WDR62O43379 1518 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 CLCN6P51797 869 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 DPCR1Q3MIW9 517 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 GSDMAQ96QA5 445 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 ZMYND12Q9H0C1 365 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 TYW5A2RUC4 315 aaKnown RBP10.39□□□□□ -0.75
CSMD1-217ENST00000602723 ZNF449Q6P9G9 518 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 NT5C1BQ96P26 610 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 TRIM15Q9C019 465 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 HSPD1P10809 573 aaKnown RBP10.39□□□□□ -0.75
CSMD1-217ENST00000602723 ACRBPQ8NEB7 543 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 POLR3EQ9NVU0 708 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 MRPL11Q9Y3B7 192 aaKnown RBP10.39□□□□□ -0.75
CSMD1-217ENST00000602723 KIAA0232Q92628 1395 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 NPC1L1Q9UHC9 1359 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 SOWAHDA6NJG2 315 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 LARGE2Q8N3Y3 721 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 UPF3AQ9H1J1 476 aaKnown RBP10.39□□□□□ -0.75
CSMD1-217ENST00000602723 ACSL3O95573 720 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.39□□□□□ -0.75
CSMD1-217ENST00000602723 ABCC4O15439 1325 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 MAPK13O15264 365 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 DNAAF3Q8N9W5 541 aa10.39□□□□□ -0.75
CSMD1-217ENST00000602723 SMCR8Q8TEV9 937 aaPredicted RBP10.39□□□□□ -0.75
CSMD1-217ENST00000602723 TNKSO95271 1327 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 KLRF2D3W0D1 207 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 TADA3O75528 432 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 SYF2O95926 243 aaKnown RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms