RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 USP21Q9UK80 565 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 ABCB11O95342 1321 aa16.07■□□□□ 0.16
SMG9-211ENST00000601170 BBOX1O75936 387 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 GYS1P13807 737 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 ERCC3P19447 782 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 LMAN1P49257 510 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 LRRC55Q6ZSA7 311 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 SMCR8Q8TEV9 937 aaPredicted RBP16.06■□□□□ 0.16
SMG9-211ENST00000601170 CCDC102AQ96A19 550 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 IFIH1Q9BYX4 1025 aaKnown RBP16.06■□□□□ 0.16
SMG9-211ENST00000601170 JMJD4Q9H9V9 463 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 RIC8AQ9NPQ8 531 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 FAN1Q9Y2M0 1017 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 PNMA6FA0A0J9YX94 578 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 F8W031 263 aaPredicted RBP16.06■□□□□ 0.16
SMG9-211ENST00000601170 PPP1R11O60927 126 aaPredicted RBP16.06■□□□□ 0.16
SMG9-211ENST00000601170 ADRA2BP18089 450 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 MCM3P25205 808 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 KIF11P52732 1056 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 EHHADHQ08426 723 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 ZNF543Q08ER8 600 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 LRRC41Q15345 812 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 PPP1R18Q6NYC8 613 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 CCDC84Q86UT8 332 aaPredicted RBP16.06■□□□□ 0.16
SMG9-211ENST00000601170 ADGRF4Q8IZF3 695 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 DEF6Q9H4E7 631 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 DDX4Q9NQI0 724 aaKnown RBP16.06■□□□□ 0.16
SMG9-211ENST00000601170 PCDHA13Q9Y5I0 950 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 CAPN6Q9Y6Q1 641 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 UBR3Q6ZT12 1888 aa16.06■□□□□ 0.16
SMG9-211ENST00000601170 MYH7BA7E2Y1 1941 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 TARSL2A2RTX5 802 aaKnown RBP16.05■□□□□ 0.16
SMG9-211ENST00000601170 LRRC53A6NM62 1247 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 PDE2AO00408 941 aaPredicted RBP16.05■□□□□ 0.16
SMG9-211ENST00000601170 USO1O60763 962 aaKnown RBP16.05■□□□□ 0.16
SMG9-211ENST00000601170 TOM1O60784 492 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 TTLL1O95922 423 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 ECM1Q16610 540 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 PPP4R3AQ6IN85 833 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 GJA10Q969M2 543 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 LRRC27Q9C0I9 530 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 SH2D4AQ9H788 454 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 DDX25Q9UHL0 483 aaKnown RBP16.05■□□□□ 0.16
SMG9-211ENST00000601170 LTBP1Q14766 1721 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 EIF4A3P38919 411 aaKnown RBP16.05■□□□□ 0.16
SMG9-211ENST00000601170 CLK2P49760 499 aaKnown RBP16.05■□□□□ 0.16
SMG9-211ENST00000601170 PSMD2Q13200 908 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 HSP90B2PQ58FF3 399 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 TTBK2Q6IQ55 1244 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 RRAGAQ7L523 313 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 GPIHBP1Q8IV16 184 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 TRIM58Q8NG06 486 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 ACBD3Q9H3P7 528 aa16.05■□□□□ 0.16
SMG9-211ENST00000601170 RIMBP2O15034 1052 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 ATP2B2Q01814 1243 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 MAP9Q49MG5 647 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 FAM71BQ8TC56 605 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 HAS1Q92839 578 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 CUL5Q93034 780 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 TSG101Q99816 390 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 MLXIPQ9HAP2 919 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 SERPINB13Q9UIV8 391 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 SNX12Q9UMY4 172 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 JRKLQ9Y4A0 524 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 ARFGEF1Q9Y6D6 1849 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 AKR1B10O60218 316 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 TACC1O75410 805 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 LCA5LO95447 670 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 SLC16A2P36021 539 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 TNNT3P45378 269 aaPredicted RBP16.04■□□□□ 0.16
SMG9-211ENST00000601170 C2orf54Q08AI8 447 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 COASYQ13057 564 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 BAP1Q92560 729 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 TANGO6Q9C0B7 1094 aa16.04■□□□□ 0.16
SMG9-211ENST00000601170 LRRC37AA6NMS7 1700 aa16.03■□□□□ 0.16
SMG9-211ENST00000601170 MYH4Q9Y623 1939 aa16.03■□□□□ 0.16
SMG9-211ENST00000601170 MARCH6O60337 910 aa16.03■□□□□ 0.16
SMG9-211ENST00000601170 PHACTR2O75167 634 aa16.03■□□□□ 0.16
SMG9-211ENST00000601170 ZMYND10O75800 440 aa16.03■□□□□ 0.16
SMG9-211ENST00000601170 MOCS3O95396 460 aa16.03■□□□□ 0.16
SMG9-211ENST00000601170 MYOCDQ8IZQ8 938 aa16.03■□□□□ 0.16
SMG9-211ENST00000601170 CCDC155Q8N6L0 562 aa16.03■□□□□ 0.16
SMG9-211ENST00000601170 DNAJC19Q96DA6 116 aa16.03■□□□□ 0.16
SMG9-211ENST00000601170 DRC1Q96MC2 740 aa16.03■□□□□ 0.16
SMG9-211ENST00000601170 VIPAS39Q9H9C1 493 aa16.03■□□□□ 0.16
SMG9-211ENST00000601170 MED4Q9NPJ6 270 aa16.03■□□□□ 0.16
SMG9-211ENST00000601170 HOXA10P31260 410 aaPredicted RBP16.02■□□□□ 0.16
SMG9-211ENST00000601170 HOXA7P31268 230 aaPredicted RBP16.02■□□□□ 0.16
SMG9-211ENST00000601170 ZSCAN26Q16670 478 aa16.02■□□□□ 0.16
SMG9-211ENST00000601170 MUM1L1Q5H9M0 696 aa16.02■□□□□ 0.16
SMG9-211ENST00000601170 IQCEQ6IPM2 695 aa16.02■□□□□ 0.16
SMG9-211ENST00000601170 PROM2Q8N271 834 aa16.02■□□□□ 0.16
SMG9-211ENST00000601170 SWAP70Q9UH65 585 aa16.02■□□□□ 0.16
SMG9-211ENST00000601170 MYH10P35580 1976 aa16.02■□□□□ 0.16
SMG9-211ENST00000601170 USP17L10C9JJH3 530 aa16.02■□□□□ 0.15
SMG9-211ENST00000601170 SHMT1P34896 483 aa16.02■□□□□ 0.15
SMG9-211ENST00000601170 MRPL12P52815 198 aaKnown RBP16.02■□□□□ 0.15
SMG9-211ENST00000601170 ZCWPW2Q504Y3 356 aa16.02■□□□□ 0.15
SMG9-211ENST00000601170 KCTD1Q719H9 257 aa16.02■□□□□ 0.15
SMG9-211ENST00000601170 CACNA2D4Q7Z3S7 1137 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms